RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W YRF1-5P0CX21 1796 aa14.68□□□□□ -0.06
SMM1YNR015W YRF1-8P0CX22 1796 aa14.68□□□□□ -0.06
SMM1YNR015W RPO21P04050 1733 aaKnown RBP14.66□□□□□ -0.06
SMM1YNR015W STH1P32597 1359 aa14.65□□□□□ -0.06
SMM1YNR015W SNQ2P32568 1501 aaKnown RBP14.65□□□□□ -0.06
SMM1YNR015W SNT2P53127 1403 aa14.64□□□□□ -0.07
SMM1YNR015W SAS10Q12136 610 aaPredicted RBP14.59□□□□□ -0.07
SMM1YNR015W VPS15P22219 1454 aa14.56□□□□□ -0.08
SMM1YNR015W GEA2P39993 1459 aaKnown RBP14.55□□□□□ -0.08
SMM1YNR015W BNI1P41832 1953 aa14.52□□□□□ -0.09
SMM1YNR015W MET10P39692 1035 aa14.5□□□□□ -0.09
SMM1YNR015W ITT1Q04638 464 aa14.5□□□□□ -0.09
SMM1YNR015W RTT106P40161 455 aa14.49□□□□□ -0.09
SMM1YNR015W TAF7Q05021 590 aa14.49□□□□□ -0.09
SMM1YNR015W MLP2P40457 1679 aa14.49□□□□□ -0.09
SMM1YNR015W ULS1Q08562 1619 aa14.48□□□□□ -0.09
SMM1YNR015W PDR15Q04182 1529 aaKnown RBP14.46□□□□□ -0.09
SMM1YNR015W PDR12Q02785 1511 aa14.41□□□□□ -0.1
SMM1YNR015W SPO14P36126 1683 aa14.39□□□□□ -0.11
SMM1YNR015W DRS2P39524 1355 aa14.39□□□□□ -0.11
SMM1YNR015W IRC20Q06554 1556 aa14.35□□□□□ -0.11
SMM1YNR015W IFH1P39520 1085 aa14.34□□□□□ -0.11
SMM1YNR015W GDB1Q06625 1536 aa14.31□□□□□ -0.12
SMM1YNR015W NUP170P38181 1502 aa14.3□□□□□ -0.12
SMM1YNR015W NUP157P40064 1391 aaKnown RBP14.29□□□□□ -0.12
SMM1YNR015W GEA1P47102 1408 aaPredicted RBP14.29□□□□□ -0.12
SMM1YNR015W MMS1Q06211 1407 aa14.28□□□□□ -0.12
SMM1YNR015W PDR10P51533 1564 aa14.22□□□□□ -0.13
SMM1YNR015W IQG1Q12280 1495 aa14.22□□□□□ -0.13
SMM1YNR015W TY3B-GQ99315 1547 aa14.19□□□□□ -0.14
SMM1YNR015W CAT8P39113 1433 aa14.18□□□□□ -0.14
SMM1YNR015W BUD3P25558 1636 aa14.15□□□□□ -0.14
SMM1YNR015W YBT1P32386 1661 aa14.13□□□□□ -0.15
SMM1YNR015W ABP1P15891 592 aaKnown RBP14.11□□□□□ -0.15
SMM1YNR015W TRM3Q07527 1436 aa14.09□□□□□ -0.15
SMM1YNR015W DOP1Q03921 1698 aa14.09□□□□□ -0.15
SMM1YNR015W DNF2Q12675 1612 aa14.05□□□□□ -0.16
SMM1YNR015W MIF2P35201 549 aa14.04□□□□□ -0.16
SMM1YNR015W CKB1P43639 278 aa14.03□□□□□ -0.16
SMM1YNR015W ARO1P08566 1588 aaKnown RBP14.03□□□□□ -0.16
SMM1YNR015W YSP2Q06681 1438 aa14.01□□□□□ -0.17
SMM1YNR015W SEC7P11075 2009 aaKnown RBP14□□□□□ -0.17
SMM1YNR015W CHC1P22137 1653 aaKnown RBP13.93□□□□□ -0.18
SMM1YNR015W BNR1P40450 1375 aa13.91□□□□□ -0.18
SMM1YNR015W SRB8P25648 1427 aa13.9□□□□□ -0.19
SMM1YNR015W IKI3Q06706 1349 aaKnown RBP13.88□□□□□ -0.19
SMM1YNR015W YOR093CQ12275 1648 aa13.79□□□□□ -0.2
SMM1YNR015W FAP1P53971 965 aa13.79□□□□□ -0.2
SMM1YNR015W BUD21Q08492 214 aaPredicted RBP13.77□□□□□ -0.21
SMM1YNR015W YAP3P38749 330 aa13.75□□□□□ -0.21
SMM1YNR015W SSM4P40318 1319 aa13.73□□□□□ -0.21
SMM1YNR015W URN1Q06525 465 aaKnown RBP13.69□□□□□ -0.22
SMM1YNR015W DNF3Q12674 1656 aa13.66□□□□□ -0.22
SMM1YNR015W YFR006WP43590 535 aa13.62□□□□□ -0.23
SMM1YNR015W IPL1P38991 367 aa13.59□□□□□ -0.23
SMM1YNR015W NUP188P52593 1655 aaKnown RBP13.56□□□□□ -0.24
SMM1YNR015W MAK10Q02197 733 aa13.54□□□□□ -0.24
SMM1YNR015W TYS1P36421 394 aaKnown RBP13.53□□□□□ -0.24
SMM1YNR015W VMR1P38735 1592 aa13.53□□□□□ -0.24
SMM1YNR015W GCN2P15442 1659 aa13.48□□□□□ -0.25
SMM1YNR015W HAP1P0CE41 1502 aa13.47□□□□□ -0.25
SMM1YNR015W IML1P47170 1584 aa13.45□□□□□ -0.26
SMM1YNR015W PDR5P33302 1511 aaKnown RBP13.45□□□□□ -0.26
SMM1YNR015W PDR11P40550 1411 aa13.41□□□□□ -0.26
SMM1YNR015W DIP2Q12220 943 aaPredicted RBP13.41□□□□□ -0.26
SMM1YNR015W USO1P25386 1790 aa13.32□□□□□ -0.28
SMM1YNR015W PAF1P38351 445 aa13.29□□□□□ -0.28
SMM1YNR015W RAV1P47104 1357 aa13.27□□□□□ -0.29
SMM1YNR015W PRI1P10363 409 aa13.25□□□□□ -0.29
SMM1YNR015W BFR2Q06631 534 aaKnown RBP13.25□□□□□ -0.29
SMM1YNR015W TY1B-NL2Q99337 1749 aaKnown RBP13.25□□□□□ -0.29
SMM1YNR015W YMR196WQ04336 1088 aa13.23□□□□□ -0.29
SMM1YNR015W RTC1Q08281 1341 aa13.2□□□□□ -0.3
SMM1YNR015W THI12P42883 340 aa13.19□□□□□ -0.3
SMM1YNR015W THI5P43534 340 aa13.19□□□□□ -0.3
SMM1YNR015W THI11P47183 340 aa13.19□□□□□ -0.3
SMM1YNR015W NOP7P53261 605 aaKnown RBP13.19□□□□□ -0.3
SMM1YNR015W THI13Q07748 340 aa13.19□□□□□ -0.3
SMM1YNR015W ISW2Q08773 1120 aa13.17□□□□□ -0.3
SMM1YNR015W KRE5P22023 1365 aa13.15□□□□□ -0.3
SMM1YNR015W MRX12P47084 519 aa13.14□□□□□ -0.31
SMM1YNR015W BCK1Q01389 1478 aa13.13□□□□□ -0.31
SMM1YNR015W CFT1Q06632 1357 aaKnown RBP13.13□□□□□ -0.31
SMM1YNR015W ALD4P46367 519 aaKnown RBP13.13□□□□□ -0.31
SMM1YNR015W NUP192P47054 1683 aa13.12□□□□□ -0.31
SMM1YNR015W AVT3P36062 692 aa13.12□□□□□ -0.31
SMM1YNR015W RIA1P53893 1110 aa13.12□□□□□ -0.31
SMM1YNR015W CAB1Q04430 367 aa13.09□□□□□ -0.31
SMM1YNR015W RAD9P14737 1309 aa13.09□□□□□ -0.31
SMM1YNR015W AAD16Q02895 342 aa13.08□□□□□ -0.32
SMM1YNR015W YNR029CP53729 429 aaKnown RBP13.05□□□□□ -0.32
SMM1YNR015W RPG1P38249 964 aaKnown RBP13.03□□□□□ -0.32
SMM1YNR015W ESL2P36168 1195 aa13.01□□□□□ -0.33
SMM1YNR015W TAF5P38129 798 aa13□□□□□ -0.33
SMM1YNR015W PRY3P47033 881 aa12.94□□□□□ -0.34
SMM1YNR015W TAF8Q03750 510 aa12.94□□□□□ -0.34
SMM1YNR015W NAP1P25293 417 aaKnown RBP12.91□□□□□ -0.34
SMM1YNR015W TY3B-IQ7LHG5 1498 aaKnown RBP12.89□□□□□ -0.35
SMM1YNR015W PTP3P40048 928 aa12.88□□□□□ -0.35
SMM1YNR015W KIP3P53086 805 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms