RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W TY1B-GR2Q12269 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-OLQ12273 1755 aa10.27□□□□□ -0.77
SNN1YNL086W TY1B-PLQ12414 1755 aaKnown RBP10.27□□□□□ -0.77
SNN1YNL086W TY2B-BQ12491 1770 aa10.27□□□□□ -0.77
SNN1YNL086W NUP159P40477 1460 aa10.27□□□□□ -0.77
SNN1YNL086W SSP1P38871 571 aa10.22□□□□□ -0.77
SNN1YNL086W TY1B-DR3Q99231 1755 aa10.21□□□□□ -0.77
SNN1YNL086W YRF1-1P0CX20 1796 aa10.21□□□□□ -0.78
SNN1YNL086W YRF1-5P0CX21 1796 aa10.21□□□□□ -0.78
SNN1YNL086W YRF1-8P0CX22 1796 aa10.21□□□□□ -0.78
SNN1YNL086W SPP41P38904 1435 aa10.17□□□□□ -0.78
SNN1YNL086W DNF2Q12675 1612 aa10.17□□□□□ -0.78
SNN1YNL086W NTE1Q04958 1679 aa10.13□□□□□ -0.79
SNN1YNL086W TSR3Q12094 313 aaKnown RBP10.13□□□□□ -0.79
SNN1YNL086W SMC4Q12267 1418 aa10.09□□□□□ -0.79
SNN1YNL086W POL1P13382 1468 aa10.09□□□□□ -0.79
SNN1YNL086W TSC11P40061 1430 aa10.08□□□□□ -0.8
SNN1YNL086W NUP170P38181 1502 aa10.07□□□□□ -0.8
SNN1YNL086W YOR1P53049 1477 aa10.07□□□□□ -0.8
SNN1YNL086W VTH1P40438 1549 aa10.07□□□□□ -0.8
SNN1YNL086W VTH2P40890 1549 aa10.07□□□□□ -0.8
SNN1YNL086W OXP1P28273 1286 aa10.05□□□□□ -0.8
SNN1YNL086W TY1B-JR2P47100 1755 aaKnown RBP10.04□□□□□ -0.8
SNN1YNL086W TY1B-ER2Q03619 1755 aa10.04□□□□□ -0.8
SNN1YNL086W TY1B-MR1Q04214 1755 aa10.04□□□□□ -0.8
SNN1YNL086W TY1B-MR2Q04670 1755 aaKnown RBP10.04□□□□□ -0.8
SNN1YNL086W TY1B-LR1Q12088 1755 aaKnown RBP10.04□□□□□ -0.8
SNN1YNL086W TY1B-NL1Q12112 1755 aa10.04□□□□□ -0.8
SNN1YNL086W TY1B-GR1Q12141 1755 aa10.04□□□□□ -0.8
SNN1YNL086W TY1B-BLQ12490 1755 aa10.04□□□□□ -0.8
SNN1YNL086W STU1P38198 1513 aa10.04□□□□□ -0.8
SNN1YNL086W RPO21P04050 1733 aaKnown RBP10.03□□□□□ -0.8
SNN1YNL086W TAF7Q05021 590 aa10.03□□□□□ -0.8
SNN1YNL086W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
SNN1YNL086W YOR093CQ12275 1648 aa10.02□□□□□ -0.81
SNN1YNL086W YAH1Q12184 172 aaKnown RBP10.01□□□□□ -0.81
SNN1YNL086W YIL055CP40523 627 aaKnown RBP9.97□□□□□ -0.81
SNN1YNL086W SNT2P53127 1403 aa9.95□□□□□ -0.82
SNN1YNL086W MYO4P32492 1471 aa9.95□□□□□ -0.82
SNN1YNL086W DOP1Q03921 1698 aa9.94□□□□□ -0.82
SNN1YNL086W ULS1Q08562 1619 aa9.94□□□□□ -0.82
SNN1YNL086W SPO14P36126 1683 aa9.93□□□□□ -0.82
SNN1YNL086W MET10P39692 1035 aa9.92□□□□□ -0.82
SNN1YNL086W SNQ2P32568 1501 aaKnown RBP9.89□□□□□ -0.83
SNN1YNL086W YLR271WQ06152 274 aa9.89□□□□□ -0.83
SNN1YNL086W LEO1P38439 464 aa9.88□□□□□ -0.83
SNN1YNL086W YKR023WP36119 530 aaKnown RBP9.87□□□□□ -0.83
SNN1YNL086W RTT106P40161 455 aa9.84□□□□□ -0.83
SNN1YNL086W TRM3Q07527 1436 aa9.83□□□□□ -0.84
SNN1YNL086W PDR10P51533 1564 aa9.82□□□□□ -0.84
SNN1YNL086W IQG1Q12280 1495 aa9.8□□□□□ -0.84
SNN1YNL086W PRY3P47033 881 aa9.8□□□□□ -0.84
SNN1YNL086W MGA2P40578 1113 aa9.79□□□□□ -0.84
SNN1YNL086W RSM7P47150 247 aa9.79□□□□□ -0.84
SNN1YNL086W STH1P32597 1359 aa9.77□□□□□ -0.84
SNN1YNL086W MRPL32P25348 183 aa9.77□□□□□ -0.85
SNN1YNL086W PDR12Q02785 1511 aa9.77□□□□□ -0.85
SNN1YNL086W NUP157P40064 1391 aaKnown RBP9.76□□□□□ -0.85
SNN1YNL086W YTA7P40340 1379 aa9.75□□□□□ -0.85
SNN1YNL086W GDB1Q06625 1536 aa9.74□□□□□ -0.85
SNN1YNL086W PDR15Q04182 1529 aaKnown RBP9.73□□□□□ -0.85
SNN1YNL086W SAS10Q12136 610 aaPredicted RBP9.71□□□□□ -0.86
SNN1YNL086W TFC8Q12308 588 aa9.69□□□□□ -0.86
SNN1YNL086W HOP09932 586 aa9.68□□□□□ -0.86
SNN1YNL086W DNF3Q12674 1656 aa9.67□□□□□ -0.86
SNN1YNL086W BUD3P25558 1636 aa9.66□□□□□ -0.86
SNN1YNL086W ARO1P08566 1588 aaKnown RBP9.65□□□□□ -0.86
SNN1YNL086W LEU3P08638 886 aa9.64□□□□□ -0.87
SNN1YNL086W CHC1P22137 1653 aaKnown RBP9.61□□□□□ -0.87
SNN1YNL086W MLP2P40457 1679 aa9.61□□□□□ -0.87
SNN1YNL086W CST9Q06032 482 aa9.61□□□□□ -0.87
SNN1YNL086W DCD1P06773 312 aa9.57□□□□□ -0.88
SNN1YNL086W YAP3P38749 330 aa9.57□□□□□ -0.88
SNN1YNL086W AI2P03876 854 aa9.56□□□□□ -0.88
SNN1YNL086W PSD2P53037 1138 aaKnown RBP9.56□□□□□ -0.88
SNN1YNL086W MAK10Q02197 733 aa9.55□□□□□ -0.88
SNN1YNL086W TY3B-GQ99315 1547 aa9.51□□□□□ -0.89
SNN1YNL086W BNR1P40450 1375 aa9.5□□□□□ -0.89
SNN1YNL086W YSP2Q06681 1438 aa9.5□□□□□ -0.89
SNN1YNL086W CDC27P38042 758 aa9.5□□□□□ -0.89
SNN1YNL086W BBC1P47068 1157 aa9.5□□□□□ -0.89
SNN1YNL086W IFH1P39520 1085 aa9.46□□□□□ -0.9
SNN1YNL086W BCH2P36122 765 aa9.43□□□□□ -0.9
SNN1YNL086W USO1P25386 1790 aa9.41□□□□□ -0.9
SNN1YNL086W CKB1P43639 278 aa9.4□□□□□ -0.9
SNN1YNL086W THI12P42883 340 aa9.39□□□□□ -0.91
SNN1YNL086W THI5P43534 340 aa9.39□□□□□ -0.91
SNN1YNL086W THI11P47183 340 aa9.39□□□□□ -0.91
SNN1YNL086W THI13Q07748 340 aa9.39□□□□□ -0.91
SNN1YNL086W URN1Q06525 465 aaKnown RBP9.36□□□□□ -0.91
SNN1YNL086W RAM2P29703 316 aa9.35□□□□□ -0.91
SNN1YNL086W RPN1P38764 993 aaKnown RBP9.35□□□□□ -0.91
SNN1YNL086W CAT8P39113 1433 aa9.34□□□□□ -0.91
SNN1YNL086W SET1P38827 1080 aaKnown RBP9.34□□□□□ -0.91
SNN1YNL086W EPS1P40557 701 aa9.32□□□□□ -0.92
SNN1YNL086W YMR196WQ04336 1088 aa9.32□□□□□ -0.92
SNN1YNL086W HAA1Q12753 694 aaKnown RBP9.32□□□□□ -0.92
SNN1YNL086W SEC7P11075 2009 aaKnown RBP9.32□□□□□ -0.92
SNN1YNL086W GLN1P32288 370 aaKnown RBP9.31□□□□□ -0.92
SNN1YNL086W MRM1P25270 412 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms