RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W DBP1P24784 617 aaKnown RBP7.12□□□□□ -1.27
BDP1YNL039W PTC3P34221 468 aaKnown RBP7.12□□□□□ -1.27
BDP1YNL039W YFR006WP43590 535 aa7.09□□□□□ -1.27
BDP1YNL039W BIM1P40013 344 aa7.08□□□□□ -1.28
BDP1YNL039W CSN12P47130 423 aa7.08□□□□□ -1.28
BDP1YNL039W YDR090CQ03193 310 aa7.08□□□□□ -1.28
BDP1YNL039W UBP10P53874 792 aaPredicted RBP7.08□□□□□ -1.28
BDP1YNL039W UBP14P38237 781 aaKnown RBP7.07□□□□□ -1.28
BDP1YNL039W VHR2P40041 505 aa7.07□□□□□ -1.28
BDP1YNL039W YJL007CP47080 104 aa7.07□□□□□ -1.28
BDP1YNL039W GLN1P32288 370 aaKnown RBP7.06□□□□□ -1.28
BDP1YNL039W MAP2P38174 421 aaKnown RBP7.06□□□□□ -1.28
BDP1YNL039W SSA4P22202 642 aaKnown RBP7.05□□□□□ -1.28
BDP1YNL039W PSE1P32337 1089 aaKnown RBP7.04□□□□□ -1.28
BDP1YNL039W ATG32P40458 529 aa7.04□□□□□ -1.28
BDP1YNL039W YOR238WQ08634 303 aa7.03□□□□□ -1.28
BDP1YNL039W SLX5P32828 619 aaKnown RBP7.03□□□□□ -1.28
BDP1YNL039W KIC1P38692 1080 aa7.02□□□□□ -1.29
BDP1YNL039W YLR326WQ06170 240 aaKnown RBP7.02□□□□□ -1.29
BDP1YNL039W ORC1P54784 914 aaPredicted RBP7□□□□□ -1.29
BDP1YNL039W RPL34BP40525 121 aaKnown RBP6.99□□□□□ -1.29
BDP1YNL039W TIF1P10081 395 aaKnown RBP6.98□□□□□ -1.29
BDP1YNL039W KTR1P27810 393 aaKnown RBP6.97□□□□□ -1.29
BDP1YNL039W ATH1P48016 1211 aa6.97□□□□□ -1.29
BDP1YNL039W SLD2P34252 453 aa6.96□□□□□ -1.3
BDP1YNL039W TEA1P47988 759 aa6.96□□□□□ -1.3
BDP1YNL039W GUT1P32190 709 aa6.95□□□□□ -1.3
BDP1YNL039W RAD54P32863 898 aa6.95□□□□□ -1.3
BDP1YNL039W ERG12P07277 443 aa6.95□□□□□ -1.3
BDP1YNL039W YBL036CP38197 257 aa6.94□□□□□ -1.3
BDP1YNL039W MRX12P47084 519 aa6.94□□□□□ -1.3
BDP1YNL039W NOP7P53261 605 aaKnown RBP6.94□□□□□ -1.3
BDP1YNL039W YGR273CP53329 174 aa6.94□□□□□ -1.3
BDP1YNL039W RPL34AP87262 121 aaPredicted RBP6.94□□□□□ -1.3
BDP1YNL039W GRE2Q12068 342 aaKnown RBP6.94□□□□□ -1.3
BDP1YNL039W CPS1P27614 576 aa6.93□□□□□ -1.3
BDP1YNL039W PCS60P38137 543 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
BDP1YNL039W VMA1P17255 1071 aaKnown RBP6.92□□□□□ -1.3
BDP1YNL039W KEX1P09620 729 aa6.92□□□□□ -1.3
BDP1YNL039W TTI1P36097 1038 aa6.92□□□□□ -1.3
BDP1YNL039W TYW1Q08960 810 aaKnown RBP6.92□□□□□ -1.3
BDP1YNL039W ORC6P38826 435 aa6.91□□□□□ -1.3
BDP1YNL039W YPR204WQ08995 1032 aa6.91□□□□□ -1.3
BDP1YNL039W NSR1P27476 414 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
BDP1YNL039W BIO2P32451 375 aa6.9□□□□□ -1.3
BDP1YNL039W RTG2P32608 588 aaKnown RBP6.9□□□□□ -1.3
BDP1YNL039W NAP1P25293 417 aaKnown RBP6.9□□□□□ -1.31
BDP1YNL039W CDC3P32457 520 aaKnown RBP6.9□□□□□ -1.31
BDP1YNL039W PIB1Q06651 286 aa6.9□□□□□ -1.31
BDP1YNL039W NOB1Q08444 459 aaKnown RBP6.9□□□□□ -1.31
BDP1YNL039W SNU71P53207 620 aaKnown RBP6.89□□□□□ -1.31
BDP1YNL039W CLB5P30283 435 aa6.87□□□□□ -1.31
BDP1YNL039W CSE4P36012 229 aa6.87□□□□□ -1.31
BDP1YNL039W RGR1P19263 1082 aa6.87□□□□□ -1.31
BDP1YNL039W SSF1P38789 453 aaPredicted RBP6.86□□□□□ -1.31
BDP1YNL039W YAP5P40574 245 aa6.86□□□□□ -1.31
BDP1YNL039W YNL108CP53929 270 aa6.86□□□□□ -1.31
BDP1YNL039W SOL3P38858 249 aa6.85□□□□□ -1.31
BDP1YNL039W HST2P53686 357 aa6.85□□□□□ -1.31
BDP1YNL039W YGL015CP33199 130 aa6.84□□□□□ -1.31
BDP1YNL039W NIS1P53939 407 aa6.84□□□□□ -1.31
BDP1YNL039W RAD59Q12223 238 aa6.84□□□□□ -1.31
BDP1YNL039W HEM3P28789 327 aa6.83□□□□□ -1.32
BDP1YNL039W FPK1P53739 893 aa6.83□□□□□ -1.32
BDP1YNL039W SAM3Q08986 587 aa6.83□□□□□ -1.32
BDP1YNL039W SUP45P12385 437 aaKnown RBP6.82□□□□□ -1.32
BDP1YNL039W MVP1P40959 511 aaKnown RBP6.82□□□□□ -1.32
BDP1YNL039W PKH3Q03306 898 aaPredicted RBP6.82□□□□□ -1.32
BDP1YNL039W YMR196WQ04336 1088 aa6.82□□□□□ -1.32
BDP1YNL039W SIS2P36024 562 aa6.82□□□□□ -1.32
BDP1YNL039W SEN54Q02825 467 aaPredicted RBP6.82□□□□□ -1.32
BDP1YNL039W MMP1Q12372 583 aa6.82□□□□□ -1.32
BDP1YNL039W PUP1P25043 261 aa6.81□□□□□ -1.32
BDP1YNL039W YML083CQ04526 418 aa6.8□□□□□ -1.32
BDP1YNL039W GYP5Q12344 894 aa6.8□□□□□ -1.32
BDP1YNL039W ESS1P22696 170 aa6.8□□□□□ -1.32
BDP1YNL039W RRN6P32786 894 aa6.8□□□□□ -1.32
BDP1YNL039W PAM1P37304 830 aaKnown RBP6.8□□□□□ -1.32
BDP1YNL039W HAT1Q12341 374 aa6.8□□□□□ -1.32
BDP1YNL039W MET10P39692 1035 aa6.79□□□□□ -1.32
BDP1YNL039W NST1P53935 1240 aa6.78□□□□□ -1.32
BDP1YNL039W IOC4Q04213 475 aa6.78□□□□□ -1.32
BDP1YNL039W ENO1P00924 437 aaKnown RBP6.77□□□□□ -1.33
BDP1YNL039W SCJ1P25303 377 aa6.77□□□□□ -1.33
BDP1YNL039W SPT5P27692 1063 aaKnown RBP6.77□□□□□ -1.33
BDP1YNL039W TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
BDP1YNL039W GAP1P19145 602 aaPredicted RBP6.77□□□□□ -1.33
BDP1YNL039W ENO2P00925 437 aaKnown RBP6.76□□□□□ -1.33
BDP1YNL039W YJU3P28321 313 aa6.76□□□□□ -1.33
BDP1YNL039W MRX10Q05648 414 aa6.76□□□□□ -1.33
BDP1YNL039W CSC1Q06538 782 aa6.76□□□□□ -1.33
BDP1YNL039W ARG8P18544 423 aa6.75□□□□□ -1.33
BDP1YNL039W YDJ1P25491 409 aaKnown RBP6.75□□□□□ -1.33
BDP1YNL039W YPR109WQ06104 294 aa6.74□□□□□ -1.33
BDP1YNL039W SIT4P20604 311 aa6.74□□□□□ -1.33
BDP1YNL039W TGL4P36165 910 aa6.74□□□□□ -1.33
BDP1YNL039W AI4P03878 556 aa6.73□□□□□ -1.33
BDP1YNL039W MPH3P0CE00 602 aa6.73□□□□□ -1.33
BDP1YNL039W RPP1BP10622 106 aaKnown RBP6.73□□□□□ -1.33
BDP1YNL039W RIM21P48565 533 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms