RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W TY1B-BLQ12490 1755 aa13.09□□□□□ -0.31
PRE5YMR314W NTE1Q04958 1679 aa13.08□□□□□ -0.31
PRE5YMR314W DNF2Q12675 1612 aa13.06□□□□□ -0.32
PRE5YMR314W POL1P13382 1468 aa13.04□□□□□ -0.32
PRE5YMR314W SPP41P38904 1435 aa13.02□□□□□ -0.33
PRE5YMR314W SMC4Q12267 1418 aa13.02□□□□□ -0.33
PRE5YMR314W RPO21P04050 1733 aaKnown RBP13.02□□□□□ -0.33
PRE5YMR314W YOR1P53049 1477 aa12.97□□□□□ -0.33
PRE5YMR314W VTH1P40438 1549 aa12.94□□□□□ -0.34
PRE5YMR314W VTH2P40890 1549 aa12.94□□□□□ -0.34
PRE5YMR314W TSC11P40061 1430 aa12.94□□□□□ -0.34
PRE5YMR314W NUP170P38181 1502 aa12.88□□□□□ -0.35
PRE5YMR314W STU1P38198 1513 aa12.88□□□□□ -0.35
PRE5YMR314W SPO14P36126 1683 aa12.85□□□□□ -0.35
PRE5YMR314W MYO4P32492 1471 aa12.83□□□□□ -0.36
PRE5YMR314W YOR093CQ12275 1648 aa12.81□□□□□ -0.36
PRE5YMR314W SNT2P53127 1403 aa12.81□□□□□ -0.36
PRE5YMR314W ULS1Q08562 1619 aa12.76□□□□□ -0.37
PRE5YMR314W DOP1Q03921 1698 aa12.75□□□□□ -0.37
PRE5YMR314W SNQ2P32568 1501 aaKnown RBP12.73□□□□□ -0.37
PRE5YMR314W MET10P39692 1035 aa12.68□□□□□ -0.38
PRE5YMR314W TRM3Q07527 1436 aa12.65□□□□□ -0.38
PRE5YMR314W PDR12Q02785 1511 aa12.65□□□□□ -0.38
PRE5YMR314W PDR10P51533 1564 aa12.57□□□□□ -0.4
PRE5YMR314W IQG1Q12280 1495 aa12.57□□□□□ -0.4
PRE5YMR314W STH1P32597 1359 aa12.56□□□□□ -0.4
PRE5YMR314W GDB1Q06625 1536 aa12.55□□□□□ -0.4
PRE5YMR314W MLP2P40457 1679 aa12.54□□□□□ -0.4
PRE5YMR314W BUD3P25558 1636 aa12.51□□□□□ -0.41
PRE5YMR314W YTA7P40340 1379 aa12.5□□□□□ -0.41
PRE5YMR314W RTT106P40161 455 aa12.48□□□□□ -0.41
PRE5YMR314W CHC1P22137 1653 aaKnown RBP12.46□□□□□ -0.41
PRE5YMR314W PDR15Q04182 1529 aaKnown RBP12.46□□□□□ -0.42
PRE5YMR314W DNF3Q12674 1656 aa12.45□□□□□ -0.42
PRE5YMR314W NUP157P40064 1391 aaKnown RBP12.43□□□□□ -0.42
PRE5YMR314W ARO1P08566 1588 aaKnown RBP12.42□□□□□ -0.42
PRE5YMR314W SEC7P11075 2009 aaKnown RBP12.31□□□□□ -0.44
PRE5YMR314W YAP3P38749 330 aa12.2□□□□□ -0.46
PRE5YMR314W TY3B-GQ99315 1547 aa12.2□□□□□ -0.46
PRE5YMR314W USO1P25386 1790 aa12.18□□□□□ -0.46
PRE5YMR314W MAK10Q02197 733 aa12.13□□□□□ -0.47
PRE5YMR314W BNR1P40450 1375 aa12.1□□□□□ -0.47
PRE5YMR314W CAT8P39113 1433 aa12.07□□□□□ -0.48
PRE5YMR314W YBT1P32386 1661 aa12.05□□□□□ -0.48
PRE5YMR314W YSP2Q06681 1438 aa12.02□□□□□ -0.49
PRE5YMR314W TAF7Q05021 590 aa11.99□□□□□ -0.49
PRE5YMR314W URN1Q06525 465 aaKnown RBP11.97□□□□□ -0.49
PRE5YMR314W TY1B-NL2Q99337 1749 aaKnown RBP11.97□□□□□ -0.49
PRE5YMR314W SAS10Q12136 610 aaPredicted RBP11.94□□□□□ -0.5
PRE5YMR314W HAP1P0CE41 1502 aa11.93□□□□□ -0.5
PRE5YMR314W IFH1P39520 1085 aa11.92□□□□□ -0.5
PRE5YMR314W GEA1P47102 1408 aaPredicted RBP11.91□□□□□ -0.5
PRE5YMR314W YMR196WQ04336 1088 aa11.9□□□□□ -0.5
PRE5YMR314W NUP188P52593 1655 aaKnown RBP11.89□□□□□ -0.51
PRE5YMR314W IML1P47170 1584 aa11.88□□□□□ -0.51
PRE5YMR314W CKB1P43639 278 aa11.88□□□□□ -0.51
PRE5YMR314W THI12P42883 340 aa11.85□□□□□ -0.51
PRE5YMR314W THI5P43534 340 aa11.85□□□□□ -0.51
PRE5YMR314W THI11P47183 340 aa11.85□□□□□ -0.51
PRE5YMR314W THI13Q07748 340 aa11.85□□□□□ -0.51
PRE5YMR314W IPL1P38991 367 aa11.76□□□□□ -0.53
PRE5YMR314W VMR1P38735 1592 aa11.75□□□□□ -0.53
PRE5YMR314W GLN1P32288 370 aaKnown RBP11.73□□□□□ -0.53
PRE5YMR314W YAH1Q12184 172 aaKnown RBP11.72□□□□□ -0.53
PRE5YMR314W SRB8P25648 1427 aa11.68□□□□□ -0.54
PRE5YMR314W TYS1P36421 394 aaKnown RBP11.63□□□□□ -0.55
PRE5YMR314W YIL055CP40523 627 aaKnown RBP11.6□□□□□ -0.55
PRE5YMR314W APP1P53933 587 aa11.54□□□□□ -0.56
PRE5YMR314W BUD21Q08492 214 aaPredicted RBP11.53□□□□□ -0.56
PRE5YMR314W PTP3P40048 928 aa11.51□□□□□ -0.57
PRE5YMR314W PDR5P33302 1511 aaKnown RBP11.5□□□□□ -0.57
PRE5YMR314W PRI1P10363 409 aa11.5□□□□□ -0.57
PRE5YMR314W BCK1Q01389 1478 aa11.48□□□□□ -0.57
PRE5YMR314W YMR074CQ04773 145 aa11.44□□□□□ -0.58
PRE5YMR314W CFT1Q06632 1357 aaKnown RBP11.41□□□□□ -0.58
PRE5YMR314W PDR11P40550 1411 aa11.41□□□□□ -0.58
PRE5YMR314W KRE5P22023 1365 aa11.37□□□□□ -0.59
PRE5YMR314W REB1P21538 810 aa11.35□□□□□ -0.59
PRE5YMR314W GCN2P15442 1659 aa11.33□□□□□ -0.6
PRE5YMR314W YRF1-2P40105 1681 aa11.33□□□□□ -0.6
PRE5YMR314W YNR029CP53729 429 aaKnown RBP11.32□□□□□ -0.6
PRE5YMR314W RIA1P53893 1110 aa11.32□□□□□ -0.6
PRE5YMR314W MRX12P47084 519 aa11.31□□□□□ -0.6
PRE5YMR314W ENT1Q12518 454 aa11.29□□□□□ -0.6
PRE5YMR314W NUP192P47054 1683 aa11.27□□□□□ -0.61
PRE5YMR314W BUD31P25337 157 aaPredicted RBP11.26□□□□□ -0.61
PRE5YMR314W ENV9Q08651 330 aa11.26□□□□□ -0.61
PRE5YMR314W IMH1Q06704 911 aaKnown RBP11.23□□□□□ -0.61
PRE5YMR314W RRP5Q05022 1729 aaKnown RBP11.22□□□□□ -0.61
PRE5YMR314W TY3B-IQ7LHG5 1498 aaKnown RBP11.16□□□□□ -0.62
PRE5YMR314W UBP1P25037 809 aa11.09□□□□□ -0.63
PRE5YMR314W CAB1Q04430 367 aa11.08□□□□□ -0.64
PRE5YMR314W SSA1P10591 642 aaKnown RBP11.07□□□□□ -0.64
PRE5YMR314W RAV1P47104 1357 aa11.04□□□□□ -0.64
PRE5YMR314W RAD9P14737 1309 aa11.04□□□□□ -0.64
PRE5YMR314W URB1P34241 1764 aaKnown RBP11.03□□□□□ -0.64
PRE5YMR314W YBL086CP38177 466 aa11.03□□□□□ -0.64
PRE5YMR314W EDE1P34216 1381 aa11.03□□□□□ -0.64
PRE5YMR314W TY4B-HP0C2J7 1802 aa11.02□□□□□ -0.64
PRE5YMR314W TY4B-JP47024 1803 aa11.02□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms