RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W TY1B-NL1Q12112 1755 aa6.15□□□□□ -1.42
PEP5YMR231W TY1B-GR1Q12141 1755 aa6.15□□□□□ -1.42
PEP5YMR231W TY1B-BLQ12490 1755 aa6.15□□□□□ -1.42
PEP5YMR231W NSR1P27476 414 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
PEP5YMR231W MTC1P47018 478 aaKnown RBP6.14□□□□□ -1.43
PEP5YMR231W SSM4P40318 1319 aa6.13□□□□□ -1.43
PEP5YMR231W CAT8P39113 1433 aa6.12□□□□□ -1.43
PEP5YMR231W TSC11P40061 1430 aa6.12□□□□□ -1.43
PEP5YMR231W SEC3P33332 1336 aaKnown RBP6.11□□□□□ -1.43
PEP5YMR231W VTH1P40438 1549 aa6.1□□□□□ -1.43
PEP5YMR231W VTH2P40890 1549 aa6.1□□□□□ -1.43
PEP5YMR231W NUP159P40477 1460 aa6.1□□□□□ -1.43
PEP5YMR231W IQG1Q12280 1495 aa6.1□□□□□ -1.43
PEP5YMR231W ENP1P38333 483 aaKnown RBP6.1□□□□□ -1.43
PEP5YMR231W PAN1P32521 1480 aa6.09□□□□□ -1.43
PEP5YMR231W CDC25P04821 1589 aa6.08□□□□□ -1.44
PEP5YMR231W YLR419WQ06698 1435 aaKnown RBP6.07□□□□□ -1.44
PEP5YMR231W RPO21P04050 1733 aaKnown RBP6.07□□□□□ -1.44
PEP5YMR231W GEA2P39993 1459 aaKnown RBP6.05□□□□□ -1.44
PEP5YMR231W VPS15P22219 1454 aa6.05□□□□□ -1.44
PEP5YMR231W NTE1Q04958 1679 aa6.04□□□□□ -1.44
PEP5YMR231W PDR12Q02785 1511 aa6.03□□□□□ -1.44
PEP5YMR231W DNF1P32660 1571 aa6.03□□□□□ -1.44
PEP5YMR231W TFA1P36100 482 aa6.02□□□□□ -1.44
PEP5YMR231W TY3B-IQ7LHG5 1498 aaKnown RBP6.01□□□□□ -1.45
PEP5YMR231W SRB8P25648 1427 aa6□□□□□ -1.45
PEP5YMR231W ARO1P08566 1588 aaKnown RBP5.99□□□□□ -1.45
PEP5YMR231W RPA190P10964 1664 aaKnown RBP5.99□□□□□ -1.45
PEP5YMR231W POL5P39985 1022 aaKnown RBP5.97□□□□□ -1.45
PEP5YMR231W GDB1Q06625 1536 aa5.96□□□□□ -1.46
PEP5YMR231W YOR093CQ12275 1648 aa5.94□□□□□ -1.46
PEP5YMR231W IOC4Q04213 475 aa5.93□□□□□ -1.46
PEP5YMR231W MMS1Q06211 1407 aa5.93□□□□□ -1.46
PEP5YMR231W CHC1P22137 1653 aaKnown RBP5.91□□□□□ -1.46
PEP5YMR231W SAS10Q12136 610 aaPredicted RBP5.9□□□□□ -1.46
PEP5YMR231W MHP1P43638 1398 aa5.89□□□□□ -1.47
PEP5YMR231W PRS1P32895 427 aaKnown RBP5.88□□□□□ -1.47
PEP5YMR231W SPO14P36126 1683 aa5.87□□□□□ -1.47
PEP5YMR231W BUD3P25558 1636 aa5.86□□□□□ -1.47
PEP5YMR231W YRF1-1P0CX20 1796 aa5.82□□□□□ -1.48
PEP5YMR231W YRF1-5P0CX21 1796 aa5.82□□□□□ -1.48
PEP5YMR231W YRF1-8P0CX22 1796 aa5.82□□□□□ -1.48
PEP5YMR231W SPT7P35177 1332 aa5.82□□□□□ -1.48
PEP5YMR231W YSP2Q06681 1438 aa5.82□□□□□ -1.48
PEP5YMR231W HAP1P0CE41 1502 aa5.81□□□□□ -1.48
PEP5YMR231W BFR2Q06631 534 aaKnown RBP5.8□□□□□ -1.48
PEP5YMR231W RAV1P47104 1357 aa5.77□□□□□ -1.48
PEP5YMR231W DOP1Q03921 1698 aa5.77□□□□□ -1.49
PEP5YMR231W RPP0P05317 312 aaKnown RBP5.77□□□□□ -1.49
PEP5YMR231W SEC7P11075 2009 aaKnown RBP5.77□□□□□ -1.49
PEP5YMR231W NUP188P52593 1655 aaKnown RBP5.77□□□□□ -1.49
PEP5YMR231W LTE1P07866 1435 aa5.77□□□□□ -1.49
PEP5YMR231W DNF2Q12675 1612 aa5.76□□□□□ -1.49
PEP5YMR231W NUP192P47054 1683 aa5.76□□□□□ -1.49
PEP5YMR231W SCT1P32784 759 aa5.76□□□□□ -1.49
PEP5YMR231W RTT106P40161 455 aa5.75□□□□□ -1.49
PEP5YMR231W VMR1P38735 1592 aa5.75□□□□□ -1.49
PEP5YMR231W RTC1Q08281 1341 aa5.74□□□□□ -1.49
PEP5YMR231W YIR014WP40570 242 aa5.73□□□□□ -1.49
PEP5YMR231W DNF3Q12674 1656 aa5.73□□□□□ -1.49
PEP5YMR231W MET5P47169 1442 aa5.72□□□□□ -1.49
PEP5YMR231W IFH1P39520 1085 aa5.72□□□□□ -1.49
PEP5YMR231W IML1P47170 1584 aa5.71□□□□□ -1.5
PEP5YMR231W YRF1-4O13559 1382 aa5.71□□□□□ -1.5
PEP5YMR231W YML133CQ03099 1374 aa5.71□□□□□ -1.5
PEP5YMR231W YLL067CQ07888 1374 aa5.71□□□□□ -1.5
PEP5YMR231W YLL066CQ99208 1374 aa5.71□□□□□ -1.5
PEP5YMR231W YRB30P53107 440 aaPredicted RBP5.7□□□□□ -1.5
PEP5YMR231W TRM3Q07527 1436 aa5.69□□□□□ -1.5
PEP5YMR231W ABP1P15891 592 aaKnown RBP5.69□□□□□ -1.5
PEP5YMR231W MLP1Q02455 1875 aaKnown RBP5.69□□□□□ -1.5
PEP5YMR231W SNF2P22082 1703 aa5.68□□□□□ -1.5
PEP5YMR231W NUP157P40064 1391 aaKnown RBP5.67□□□□□ -1.5
PEP5YMR231W MET10P39692 1035 aa5.65□□□□□ -1.5
PEP5YMR231W NOP7P53261 605 aaKnown RBP5.65□□□□□ -1.51
PEP5YMR231W PDR11P40550 1411 aa5.65□□□□□ -1.51
PEP5YMR231W IME2P32581 645 aa5.63□□□□□ -1.51
PEP5YMR231W OPY1P38271 328 aa5.62□□□□□ -1.51
PEP5YMR231W CDC45Q08032 650 aa5.62□□□□□ -1.51
PEP5YMR231W BUD21Q08492 214 aaPredicted RBP5.61□□□□□ -1.51
PEP5YMR231W APC1P53886 1748 aa5.6□□□□□ -1.51
PEP5YMR231W DRS2P39524 1355 aa5.6□□□□□ -1.51
PEP5YMR231W PSD2P53037 1138 aaKnown RBP5.6□□□□□ -1.51
PEP5YMR231W PAF1P38351 445 aa5.6□□□□□ -1.51
PEP5YMR231W BCK1Q01389 1478 aa5.59□□□□□ -1.51
PEP5YMR231W VPS27P40343 622 aaKnown RBP5.59□□□□□ -1.51
PEP5YMR231W BNR1P40450 1375 aa5.59□□□□□ -1.51
PEP5YMR231W CFT1Q06632 1357 aaKnown RBP5.58□□□□□ -1.52
PEP5YMR231W PDS5Q04264 1277 aa5.58□□□□□ -1.52
PEP5YMR231W ESL2P36168 1195 aa5.57□□□□□ -1.52
PEP5YMR231W EBP2P36049 427 aaKnown RBP5.57□□□□□ -1.52
PEP5YMR231W SIR4P11978 1358 aa5.57□□□□□ -1.52
PEP5YMR231W EDE1P34216 1381 aa5.55□□□□□ -1.52
PEP5YMR231W CAB3P36076 571 aa5.55□□□□□ -1.52
PEP5YMR231W CLC1P17891 233 aa5.54□□□□□ -1.52
PEP5YMR231W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
PEP5YMR231W TCB2P48231 1178 aa5.53□□□□□ -1.52
PEP5YMR231W SNF7P39929 240 aaKnown RBP5.52□□□□□ -1.53
PEP5YMR231W USO1P25386 1790 aa5.52□□□□□ -1.53
PEP5YMR231W FKH1P40466 484 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms