RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C TY3B-GQ99315 1547 aa12.41□□□□□ -0.42
GID8YMR135C VTH1P40438 1549 aa12.4□□□□□ -0.42
GID8YMR135C VTH2P40890 1549 aa12.4□□□□□ -0.42
GID8YMR135C SNT2P53127 1403 aa12.39□□□□□ -0.43
GID8YMR135C PAN1P32521 1480 aa12.38□□□□□ -0.43
GID8YMR135C NSR1P27476 414 aaKnown RBP RIP-Chip data12.38□□□□□ -0.43not detected
GID8YMR135C CDC25P04821 1589 aa12.33□□□□□ -0.44
GID8YMR135C TY1B-JR2P47100 1755 aaKnown RBP12.29□□□□□ -0.44
GID8YMR135C TY1B-ER2Q03619 1755 aa12.29□□□□□ -0.44
GID8YMR135C TY1B-MR1Q04214 1755 aa12.29□□□□□ -0.44
GID8YMR135C TY1B-MR2Q04670 1755 aaKnown RBP12.29□□□□□ -0.44
GID8YMR135C TY1B-LR1Q12088 1755 aaKnown RBP12.29□□□□□ -0.44
GID8YMR135C TY1B-NL1Q12112 1755 aa12.29□□□□□ -0.44
GID8YMR135C TY1B-GR1Q12141 1755 aa12.29□□□□□ -0.44
GID8YMR135C TY1B-BLQ12490 1755 aa12.29□□□□□ -0.44
GID8YMR135C VPS15P22219 1454 aa12.29□□□□□ -0.44
GID8YMR135C YBT1P32386 1661 aa12.25□□□□□ -0.45
GID8YMR135C RQC2Q12532 1038 aaKnown RBP12.25□□□□□ -0.45
GID8YMR135C ESC1Q03661 1658 aaKnown RBP12.23□□□□□ -0.45
GID8YMR135C IRC20Q06554 1556 aa12.23□□□□□ -0.45
GID8YMR135C GEA2P39993 1459 aaKnown RBP12.2□□□□□ -0.46
GID8YMR135C CAT8P39113 1433 aa12.2□□□□□ -0.46
GID8YMR135C POL5P39985 1022 aaKnown RBP12.19□□□□□ -0.46
GID8YMR135C NOP2P40991 618 aaKnown RBP12.19□□□□□ -0.46
GID8YMR135C RTT106P40161 455 aa12.16□□□□□ -0.46
GID8YMR135C DNF1P32660 1571 aa12.15□□□□□ -0.47
GID8YMR135C NTE1Q04958 1679 aa12.12□□□□□ -0.47
GID8YMR135C RPO21P04050 1733 aaKnown RBP12.12□□□□□ -0.47
GID8YMR135C RPA190P10964 1664 aaKnown RBP12.11□□□□□ -0.47
GID8YMR135C ENP1P38333 483 aaKnown RBP12.09□□□□□ -0.47
GID8YMR135C SRB8P25648 1427 aa12.09□□□□□ -0.47
GID8YMR135C GDB1Q06625 1536 aa12.08□□□□□ -0.48
GID8YMR135C PDR10P51533 1564 aa12.08□□□□□ -0.48
GID8YMR135C ARO1P08566 1588 aaKnown RBP12.05□□□□□ -0.48
GID8YMR135C NUP159P40477 1460 aa12.03□□□□□ -0.48
GID8YMR135C GCN2P15442 1659 aa12.03□□□□□ -0.48
GID8YMR135C SEC3P33332 1336 aaKnown RBP12.02□□□□□ -0.49
GID8YMR135C PDR12Q02785 1511 aa11.99□□□□□ -0.49
GID8YMR135C SPT7P35177 1332 aa11.98□□□□□ -0.49
GID8YMR135C PDR5P33302 1511 aaKnown RBP11.93□□□□□ -0.5
GID8YMR135C CKB1P43639 278 aa11.92□□□□□ -0.5
GID8YMR135C SPO14P36126 1683 aa11.91□□□□□ -0.5
GID8YMR135C MRPL32P25348 183 aa11.9□□□□□ -0.5
GID8YMR135C MET10P39692 1035 aa11.9□□□□□ -0.5
GID8YMR135C MMS1Q06211 1407 aa11.89□□□□□ -0.51
GID8YMR135C NUP157P40064 1391 aaKnown RBP11.88□□□□□ -0.51
GID8YMR135C YSP2Q06681 1438 aa11.88□□□□□ -0.51
GID8YMR135C IQG1Q12280 1495 aa11.88□□□□□ -0.51
GID8YMR135C BUD21Q08492 214 aaPredicted RBP11.86□□□□□ -0.51
GID8YMR135C BUD3P25558 1636 aa11.85□□□□□ -0.51
GID8YMR135C NOP7P53261 605 aaKnown RBP11.84□□□□□ -0.51
GID8YMR135C DIP2Q12220 943 aaPredicted RBP11.84□□□□□ -0.51
GID8YMR135C YRF1-1P0CX20 1796 aa11.84□□□□□ -0.51
GID8YMR135C YRF1-5P0CX21 1796 aa11.84□□□□□ -0.51
GID8YMR135C YRF1-8P0CX22 1796 aa11.84□□□□□ -0.51
GID8YMR135C MHP1P43638 1398 aa11.79□□□□□ -0.52
GID8YMR135C PRS1P32895 427 aaKnown RBP11.78□□□□□ -0.52
GID8YMR135C YOR093CQ12275 1648 aa11.76□□□□□ -0.53
GID8YMR135C YGL015CP33199 130 aa11.76□□□□□ -0.53
GID8YMR135C YLR419WQ06698 1435 aaKnown RBP11.75□□□□□ -0.53
GID8YMR135C TY3B-IQ7LHG5 1498 aaKnown RBP11.73□□□□□ -0.53
GID8YMR135C LTE1P07866 1435 aa11.72□□□□□ -0.53
GID8YMR135C MET5P47169 1442 aa11.72□□□□□ -0.53
GID8YMR135C PAF1P38351 445 aa11.71□□□□□ -0.53
GID8YMR135C BFR2Q06631 534 aaKnown RBP11.71□□□□□ -0.53
GID8YMR135C PSD2P53037 1138 aaKnown RBP11.7□□□□□ -0.54
GID8YMR135C CHC1P22137 1653 aaKnown RBP11.68□□□□□ -0.54
GID8YMR135C BNR1P40450 1375 aa11.67□□□□□ -0.54
GID8YMR135C RAV1P47104 1357 aa11.66□□□□□ -0.54
GID8YMR135C SEC7P11075 2009 aaKnown RBP11.66□□□□□ -0.54
GID8YMR135C LEU3P08638 886 aa11.65□□□□□ -0.55
GID8YMR135C ORC1P54784 914 aaPredicted RBP11.63□□□□□ -0.55
GID8YMR135C RTC1Q08281 1341 aa11.63□□□□□ -0.55
GID8YMR135C PDR11P40550 1411 aa11.62□□□□□ -0.55
GID8YMR135C VMR1P38735 1592 aa11.58□□□□□ -0.56
GID8YMR135C PDS5Q04264 1277 aa11.56□□□□□ -0.56
GID8YMR135C DRS2P39524 1355 aa11.55□□□□□ -0.56
GID8YMR135C TAF5P38129 798 aa11.52□□□□□ -0.57
GID8YMR135C NUP188P52593 1655 aaKnown RBP11.51□□□□□ -0.57
GID8YMR135C NST1P53935 1240 aa11.5□□□□□ -0.57
GID8YMR135C NUP192P47054 1683 aa11.5□□□□□ -0.57
GID8YMR135C IML1P47170 1584 aa11.49□□□□□ -0.57
GID8YMR135C ESL2P36168 1195 aa11.49□□□□□ -0.57
GID8YMR135C KIP3P53086 805 aaKnown RBP11.48□□□□□ -0.57
GID8YMR135C TFA1P36100 482 aa11.47□□□□□ -0.57
GID8YMR135C DOP1Q03921 1698 aa11.47□□□□□ -0.57
GID8YMR135C TRM3Q07527 1436 aa11.45□□□□□ -0.58
GID8YMR135C CFT1Q06632 1357 aaKnown RBP11.43□□□□□ -0.58
GID8YMR135C BUD31P25337 157 aaPredicted RBP11.39□□□□□ -0.59
GID8YMR135C SCT1P32784 759 aa11.39□□□□□ -0.59
GID8YMR135C DNF2Q12675 1612 aa11.38□□□□□ -0.59
GID8YMR135C SPE2P21182 396 aa11.37□□□□□ -0.59
GID8YMR135C REB1P21538 810 aa11.37□□□□□ -0.59
GID8YMR135C RPP0P05317 312 aaKnown RBP11.35□□□□□ -0.59
GID8YMR135C RPL17AP05740 184 aaKnown RBP11.34□□□□□ -0.59
GID8YMR135C RPL17BP46990 184 aaKnown RBP11.34□□□□□ -0.59
GID8YMR135C IOC4Q04213 475 aa11.32□□□□□ -0.6
GID8YMR135C CDC45Q08032 650 aa11.32□□□□□ -0.6
GID8YMR135C YAP3P38749 330 aa11.31□□□□□ -0.6
GID8YMR135C VPS27P40343 622 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms