RNA–Protein interactions for RNA: YMR129W

POM152, Transcript of Glycoprotein subunit of transmembrane ring of nuclear pore complex, yeast

Gene POM152, Length 4,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
POM152	YMR129W	HGH1	P48362	394 aa	Known RBP	4.27	□□□□□ -1.73
POM152	YMR129W	YPR204W	Q08995	1032 aa		4.26	□□□□□ -1.73
POM152	YMR129W	KTR1	P27810	393 aa	Known RBP	4.25	□□□□□ -1.73
POM152	YMR129W	BRL1	P38770	471 aa		4.25	□□□□□ -1.73
POM152	YMR129W	MAP2	P38174	421 aa	Known RBP	4.25	□□□□□ -1.73
POM152	YMR129W	CSN12	P47130	423 aa		4.25	□□□□□ -1.73
POM152	YMR129W	YML083C	Q04526	418 aa		4.25	□□□□□ -1.73
POM152	YMR129W	NOP8	Q08287	484 aa	Predicted RBP	4.25	□□□□□ -1.73
POM152	YMR129W	ORC1	P54784	914 aa	Predicted RBP	4.24	□□□□□ -1.73
POM152	YMR129W	YCK3	P39962	524 aa		4.24	□□□□□ -1.73
POM152	YMR129W	PTC3	P34221	468 aa	Known RBP	4.23	□□□□□ -1.73
POM152	YMR129W	TIF1	P10081	395 aa	Known RBP	4.23	□□□□□ -1.73
POM152	YMR129W	RPL34B	P40525	121 aa	Known RBP	4.23	□□□□□ -1.73
POM152	YMR129W	COX6	P00427	148 aa		4.22	□□□□□ -1.73
POM152	YMR129W	YNL108C	P53929	270 aa		4.22	□□□□□ -1.73
POM152	YMR129W	HPC2	Q01448	625 aa		4.21	□□□□□ -1.73
POM152	YMR129W	BIO2	P32451	375 aa		4.21	□□□□□ -1.74
POM152	YMR129W	YDR090C	Q03193	310 aa		4.21	□□□□□ -1.74
POM152	YMR129W	SCJ1	P25303	377 aa		4.2	□□□□□ -1.74
POM152	YMR129W	MAK21	Q12176	1025 aa	Known RBP	4.2	□□□□□ -1.74
POM152	YMR129W	UBP14	P38237	781 aa	Known RBP	4.2	□□□□□ -1.74
POM152	YMR129W	NOB1	Q08444	459 aa	Known RBP	4.2	□□□□□ -1.74
POM152	YMR129W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
POM152	YMR129W	RTG2	P32608	588 aa	Known RBP	4.18	□□□□□ -1.74
POM152	YMR129W	MRX12	P47084	519 aa		4.18	□□□□□ -1.74
POM152	YMR129W	YBL036C	P38197	257 aa		4.18	□□□□□ -1.74
POM152	YMR129W	SSA4	P22202	642 aa	Known RBP	4.18	□□□□□ -1.74
POM152	YMR129W	YOR238W	Q08634	303 aa		4.18	□□□□□ -1.74
POM152	YMR129W	HAT1	Q12341	374 aa		4.18	□□□□□ -1.74
POM152	YMR129W	YLR326W	Q06170	240 aa	Known RBP	4.18	□□□□□ -1.74
POM152	YMR129W	RPL34A	P87262	121 aa	Predicted RBP	4.17	□□□□□ -1.74
POM152	YMR129W	ESS1	P22696	170 aa		4.16	□□□□□ -1.74
POM152	YMR129W	TTI1	P36097	1038 aa		4.16	□□□□□ -1.74
POM152	YMR129W	KTR7	P40504	517 aa		4.16	□□□□□ -1.74
POM152	YMR129W	RRN6	P32786	894 aa		4.15	□□□□□ -1.74
POM152	YMR129W	YJU3	P28321	313 aa		4.15	□□□□□ -1.75
POM152	YMR129W	MET10	P39692	1035 aa		4.15	□□□□□ -1.75
POM152	YMR129W	AIM44	Q99299	758 aa		4.15	□□□□□ -1.75
POM152	YMR129W	YDJ1	P25491	409 aa	Known RBP	4.15	□□□□□ -1.75
POM152	YMR129W	KIC1	P38692	1080 aa		4.14	□□□□□ -1.75
POM152	YMR129W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
POM152	YMR129W	PKH3	Q03306	898 aa	Predicted RBP	4.14	□□□□□ -1.75
POM152	YMR129W	SSA2	P10592	639 aa	Known RBP	4.13	□□□□□ -1.75
POM152	YMR129W	NOP7	P53261	605 aa	Known RBP	4.13	□□□□□ -1.75
POM152	YMR129W	SLX5	P32828	619 aa	Known RBP	4.13	□□□□□ -1.75
POM152	YMR129W	NAP1	P25293	417 aa	Known RBP	4.12	□□□□□ -1.75
POM152	YMR129W	RAD54	P32863	898 aa		4.12	□□□□□ -1.75
POM152	YMR129W	ATH1	P48016	1211 aa		4.12	□□□□□ -1.75
POM152	YMR129W	PUP1	P25043	261 aa		4.12	□□□□□ -1.75
POM152	YMR129W	TEA1	P47988	759 aa		4.12	□□□□□ -1.75
POM152	YMR129W	ENO1	P00924	437 aa	Known RBP	4.11	□□□□□ -1.75
POM152	YMR129W	CDC3	P32457	520 aa	Known RBP	4.11	□□□□□ -1.75
POM152	YMR129W	IPL1	P38991	367 aa		4.11	□□□□□ -1.75
POM152	YMR129W	NIS1	P53939	407 aa		4.11	□□□□□ -1.75
POM152	YMR129W	KEX1	P09620	729 aa		4.1	□□□□□ -1.75
POM152	YMR129W	YMR196W	Q04336	1088 aa		4.1	□□□□□ -1.75
POM152	YMR129W	RAD59	Q12223	238 aa		4.1	□□□□□ -1.75
POM152	YMR129W	ARG8	P18544	423 aa		4.09	□□□□□ -1.75
POM152	YMR129W	SSF1	P38789	453 aa	Predicted RBP	4.09	□□□□□ -1.75
POM152	YMR129W	VMA1	P17255	1071 aa	Known RBP	4.09	□□□□□ -1.75
POM152	YMR129W	SOL3	P38858	249 aa		4.09	□□□□□ -1.75
POM152	YMR129W	ENO2	P00925	437 aa	Known RBP	4.08	□□□□□ -1.76
POM152	YMR129W	FPK1	P53739	893 aa		4.08	□□□□□ -1.76
POM152	YMR129W	GRE2	Q12068	342 aa	Known RBP	4.08	□□□□□ -1.76
POM152	YMR129W	SLD2	P34252	453 aa		4.08	□□□□□ -1.76
POM152	YMR129W	SEN54	Q02825	467 aa	Predicted RBP	4.08	□□□□□ -1.76
POM152	YMR129W	YGR273C	P53329	174 aa		4.07	□□□□□ -1.76
POM152	YMR129W	PAM1	P37304	830 aa	Known RBP	4.07	□□□□□ -1.76
POM152	YMR129W	ILV3	P39522	585 aa	Known RBP	4.07	□□□□□ -1.76
POM152	YMR129W	ECM23	Q02710	187 aa		4.07	□□□□□ -1.76
POM152	YMR129W	RGR1	P19263	1082 aa		4.06	□□□□□ -1.76
POM152	YMR129W	SNU71	P53207	620 aa	Known RBP	4.06	□□□□□ -1.76
POM152	YMR129W	DCW1	P36091	449 aa		4.06	□□□□□ -1.76
POM152	YMR129W	ORC6	P38826	435 aa		4.06	□□□□□ -1.76
POM152	YMR129W	PSE1	P32337	1089 aa	Known RBP	4.06	□□□□□ -1.76
POM152	YMR129W	ISF1	P32488	338 aa		4.05	□□□□□ -1.76
POM152	YMR129W	ALD2	P47771	506 aa		4.05	□□□□□ -1.76
POM152	YMR129W	HAA1	Q12753	694 aa	Known RBP	4.05	□□□□□ -1.76
POM152	YMR129W	MMP1	Q12372	583 aa		4.05	□□□□□ -1.76
POM152	YMR129W	NOP53	Q12080	455 aa	Known RBP	4.05	□□□□□ -1.76
POM152	YMR129W	YBL113C	Q7M4S9	792 aa		4.05	□□□□□ -1.76
POM152	YMR129W	YPR109W	Q06104	294 aa		4.05	□□□□□ -1.76
POM152	YMR129W	TGL4	P36165	910 aa		4.04	□□□□□ -1.76
POM152	YMR129W	GUT1	P32190	709 aa		4.04	□□□□□ -1.76
POM152	YMR129W	THI12	P42883	340 aa		4.03	□□□□□ -1.76
POM152	YMR129W	THI5	P43534	340 aa		4.03	□□□□□ -1.76
POM152	YMR129W	THI11	P47183	340 aa		4.03	□□□□□ -1.76
POM152	YMR129W	THI13	Q07748	340 aa		4.03	□□□□□ -1.76
POM152	YMR129W	ATE1	P16639	503 aa		4.03	□□□□□ -1.76
POM152	YMR129W	UBX7	P38349	436 aa		4.03	□□□□□ -1.76
POM152	YMR129W	MVP1	P40959	511 aa	Known RBP	4.03	□□□□□ -1.76
POM152	YMR129W	ITT1	Q04638	464 aa		4.03	□□□□□ -1.76
POM152	YMR129W	ERP5	P38819	212 aa		4.02	□□□□□ -1.77
POM152	YMR129W	TPS3	P38426	1054 aa	Known RBP	4.02	□□□□□ -1.77
POM152	YMR129W	SUP45	P12385	437 aa	Known RBP	4.02	□□□□□ -1.77
POM152	YMR129W	CDC73	Q06697	393 aa		4.02	□□□□□ -1.77
POM152	YMR129W	GYP5	Q12344	894 aa		4.02	□□□□□ -1.77
POM152	YMR129W	JIP5	Q06214	492 aa	Predicted RBP	4.01	□□□□□ -1.77
POM152	YMR129W	GRS1	P38088	690 aa	Known RBP	4.01	□□□□□ -1.77
POM152	YMR129W	SET4	P42948	560 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms