RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YBL029C-AQ3E756 94 aa8.47□□□□□ -1.05
CCS1YMR038C YOL036WQ08206 761 aa8.46□□□□□ -1.06
CCS1YMR038C WSC3Q12215 556 aa8.46□□□□□ -1.06
CCS1YMR038C UBP9P39967 754 aa8.44□□□□□ -1.06
CCS1YMR038C VPS70P47161 811 aa8.44□□□□□ -1.06
CCS1YMR038C SET4P42948 560 aa8.43□□□□□ -1.06
CCS1YMR038C GRE2Q12068 342 aaKnown RBP8.43□□□□□ -1.06
CCS1YMR038C GYP5Q12344 894 aa8.43□□□□□ -1.06
CCS1YMR038C VNX1P42839 908 aa8.42□□□□□ -1.06
CCS1YMR038C SKI3P17883 1432 aaKnown RBP8.4□□□□□ -1.06
CCS1YMR038C TAF2P23255 1407 aa8.4□□□□□ -1.06
CCS1YMR038C BUD31P25337 157 aaPredicted RBP8.4□□□□□ -1.06
CCS1YMR038C ATH1P48016 1211 aa8.4□□□□□ -1.06
CCS1YMR038C MSB4Q12317 492 aa8.4□□□□□ -1.06
CCS1YMR038C GUT1P32190 709 aa8.39□□□□□ -1.07
CCS1YMR038C YCF1P39109 1515 aaKnown RBP8.39□□□□□ -1.07
CCS1YMR038C SSN2P38931 1420 aa8.38□□□□□ -1.07
CCS1YMR038C ABP1P15891 592 aaKnown RBP8.35□□□□□ -1.07
CCS1YMR038C DCW1P36091 449 aa8.35□□□□□ -1.07
CCS1YMR038C CKB1P43639 278 aa8.35□□□□□ -1.07
CCS1YMR038C SOL3P38858 249 aa8.34□□□□□ -1.07
CCS1YMR038C TIF11P38912 153 aaKnown RBP8.33□□□□□ -1.08
CCS1YMR038C SPP1Q03012 353 aa8.32□□□□□ -1.08
CCS1YMR038C SIN3P22579 1536 aa8.32□□□□□ -1.08
CCS1YMR038C HTA1P04911 132 aaKnown RBP8.31□□□□□ -1.08
CCS1YMR038C HTA2P04912 132 aa8.31□□□□□ -1.08
CCS1YMR038C NST1P53935 1240 aa8.31□□□□□ -1.08
CCS1YMR038C TRP5P00931 707 aaKnown RBP8.3□□□□□ -1.08
CCS1YMR038C EAP1P36041 632 aaKnown RBP8.3□□□□□ -1.08
CCS1YMR038C REF2P42073 533 aaPredicted RBP8.29□□□□□ -1.08
CCS1YMR038C ULI1P43604 169 aa8.29□□□□□ -1.08
CCS1YMR038C YGR273CP53329 174 aa8.29□□□□□ -1.08
CCS1YMR038C SSK2P53599 1579 aa8.29□□□□□ -1.08
CCS1YMR038C IOC2Q12072 812 aa8.27□□□□□ -1.09
CCS1YMR038C ESP1Q03018 1630 aa8.25□□□□□ -1.09
CCS1YMR038C PBS2P08018 668 aa8.25□□□□□ -1.09
CCS1YMR038C UBP14P38237 781 aaKnown RBP8.25□□□□□ -1.09
CCS1YMR038C YEL023CP39992 682 aa8.24□□□□□ -1.09
CCS1YMR038C VHR2P40041 505 aa8.24□□□□□ -1.09
CCS1YMR038C SPB4P25808 606 aaPredicted RBP8.23□□□□□ -1.09
CCS1YMR038C YLR326WQ06170 240 aaKnown RBP8.23□□□□□ -1.09
CCS1YMR038C LEU3P08638 886 aa8.22□□□□□ -1.09
CCS1YMR038C DSF2P38213 736 aa8.22□□□□□ -1.09
CCS1YMR038C ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
CCS1YMR038C UFD4P33202 1483 aa8.21□□□□□ -1.09
CCS1YMR038C YDR090CQ03193 310 aa8.21□□□□□ -1.1
CCS1YMR038C MPH3P0CE00 602 aa8.2□□□□□ -1.1
CCS1YMR038C LDB19Q12502 818 aa8.2□□□□□ -1.1
CCS1YMR038C AI4P03878 556 aa8.19□□□□□ -1.1
CCS1YMR038C KEX1P09620 729 aa8.19□□□□□ -1.1
CCS1YMR038C DAN4P47179 1161 aa8.19□□□□□ -1.1
CCS1YMR038C MET5P47169 1442 aa8.19□□□□□ -1.1
CCS1YMR038C PTC4P38089 393 aa8.18□□□□□ -1.1
CCS1YMR038C JIP4Q03361 876 aa8.18□□□□□ -1.1
CCS1YMR038C LTE1P07866 1435 aa8.18□□□□□ -1.1
CCS1YMR038C ESC1Q03661 1658 aaKnown RBP8.18□□□□□ -1.1
CCS1YMR038C COX6P00427 148 aa8.17□□□□□ -1.1
CCS1YMR038C MAK21Q12176 1025 aaKnown RBP8.17□□□□□ -1.1
CCS1YMR038C YNL035CP53962 389 aaKnown RBP8.16□□□□□ -1.1
CCS1YMR038C MYO2P19524 1574 aaKnown RBP8.15□□□□□ -1.1
CCS1YMR038C PCS60P38137 543 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
CCS1YMR038C SCC2Q04002 1493 aa8.14□□□□□ -1.11
CCS1YMR038C RTG1P32607 177 aa8.14□□□□□ -1.11
CCS1YMR038C ITT1Q04638 464 aa8.14□□□□□ -1.11
CCS1YMR038C CDC25P04821 1589 aa8.14□□□□□ -1.11
CCS1YMR038C MAM3Q12296 706 aa8.13□□□□□ -1.11
CCS1YMR038C RPA190P10964 1664 aaKnown RBP8.13□□□□□ -1.11
CCS1YMR038C RAD54P32863 898 aa8.12□□□□□ -1.11
CCS1YMR038C BNI1P41832 1953 aa8.1□□□□□ -1.11
CCS1YMR038C SEC61P32915 480 aa8.1□□□□□ -1.11
CCS1YMR038C IES2P40154 320 aa8.1□□□□□ -1.11
CCS1YMR038C FKH1P40466 484 aa8.1□□□□□ -1.11
CCS1YMR038C YPK9Q12697 1472 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-CP25384 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
CCS1YMR038C TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
CCS1YMR038C TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
CCS1YMR038C CHD1P32657 1468 aa8.09□□□□□ -1.11
CCS1YMR038C SLI15P38283 698 aa8.08□□□□□ -1.12
CCS1YMR038C NUP42P49686 430 aaKnown RBP8.08□□□□□ -1.12
CCS1YMR038C DNF1P32660 1571 aa8.08□□□□□ -1.12
CCS1YMR038C GEA2P39993 1459 aaKnown RBP8.07□□□□□ -1.12
CCS1YMR038C KIC1P38692 1080 aa8.07□□□□□ -1.12
CCS1YMR038C TY1B-BRQ12193 1756 aa8.07□□□□□ -1.12
CCS1YMR038C TY1B-GR3Q12316 1755 aa8.07□□□□□ -1.12
CCS1YMR038C TY1B-ORQ92393 1755 aa8.07□□□□□ -1.12
CCS1YMR038C RPO31P04051 1460 aa8.06□□□□□ -1.12
CCS1YMR038C RKR1Q04781 1562 aa8.05□□□□□ -1.12
CCS1YMR038C PML39Q03760 334 aa8.05□□□□□ -1.12
CCS1YMR038C AIR2Q12476 344 aaKnown RBP8.05□□□□□ -1.12
CCS1YMR038C MMS1Q06211 1407 aa8.04□□□□□ -1.12
CCS1YMR038C DIT2P21595 489 aa8.04□□□□□ -1.12
CCS1YMR038C SIS1P25294 352 aaKnown RBP8.04□□□□□ -1.12
CCS1YMR038C MID1P41821 548 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms