RNA–Protein interactions for RNA: YML013W

UBX2, Transcript of Bridging factor involved in ER-associated protein degradation (ERAD), yeastyeast

Gene UBX2, Length 1,755 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX2YML013W NUP42P49686 430 aaKnown RBP7.18□□□□□ -1.26
UBX2YML013W ATF2P53296 535 aa7.18□□□□□ -1.26
UBX2YML013W SPC42P36094 363 aa7.16□□□□□ -1.26
UBX2YML013W FAR11P53917 953 aa7.16□□□□□ -1.26
UBX2YML013W PKC1P24583 1151 aa7.15□□□□□ -1.26
UBX2YML013W HEM3P28789 327 aa7.15□□□□□ -1.26
UBX2YML013W BIM1P40013 344 aa7.15□□□□□ -1.27
UBX2YML013W DOS2P54858 310 aa7.15□□□□□ -1.27
UBX2YML013W ATG36P46983 293 aa7.14□□□□□ -1.27
UBX2YML013W RPL34AP87262 121 aaPredicted RBP7.14□□□□□ -1.27
UBX2YML013W AI2P03876 854 aa7.13□□□□□ -1.27
UBX2YML013W RTS3P53289 263 aa7.13□□□□□ -1.27
UBX2YML013W SUB1P54000 292 aaKnown RBP7.13□□□□□ -1.27
UBX2YML013W LAM6Q08001 693 aa7.13□□□□□ -1.27
UBX2YML013W HIR3P47171 1648 aa7.12□□□□□ -1.27
UBX2YML013W ENP1P38333 483 aaKnown RBP7.12□□□□□ -1.27
UBX2YML013W YJL007CP47080 104 aa7.12□□□□□ -1.27
UBX2YML013W GLN1P32288 370 aaKnown RBP7.11□□□□□ -1.27
UBX2YML013W CDC3P32457 520 aaKnown RBP7.11□□□□□ -1.27
UBX2YML013W SWE1P32944 819 aa7.11□□□□□ -1.27
UBX2YML013W SEN54Q02825 467 aaPredicted RBP7.11□□□□□ -1.27
UBX2YML013W ASF1P32447 279 aa7.1□□□□□ -1.27
UBX2YML013W OCA5P38738 679 aa7.1□□□□□ -1.27
UBX2YML013W SSF1P38789 453 aaPredicted RBP7.1□□□□□ -1.27
UBX2YML013W ATG32P40458 529 aa7.1□□□□□ -1.27
UBX2YML013W YKR023WP36119 530 aaKnown RBP7.1□□□□□ -1.27
UBX2YML013W MMS22Q06164 1454 aa7.08□□□□□ -1.28
UBX2YML013W REF2P42073 533 aaPredicted RBP7.08□□□□□ -1.28
UBX2YML013W YJR008WP47085 338 aa7.08□□□□□ -1.28
UBX2YML013W VPS72Q03388 795 aa7.08□□□□□ -1.28
UBX2YML013W CPS1P27614 576 aa7.08□□□□□ -1.28
UBX2YML013W RCR1P38212 213 aa7.07□□□□□ -1.28
UBX2YML013W ITT1Q04638 464 aa7.07□□□□□ -1.28
UBX2YML013W MAK11P20484 414 aaKnown RBP7.06□□□□□ -1.28
UBX2YML013W RPL34BP40525 121 aaKnown RBP7.05□□□□□ -1.28
UBX2YML013W CHD1P32657 1468 aa7.05□□□□□ -1.28
UBX2YML013W SSA2P10592 639 aaKnown RBP7.04□□□□□ -1.28
UBX2YML013W FPR4Q06205 392 aaPredicted RBP7.04□□□□□ -1.28
UBX2YML013W XRN1P22147 1528 aaKnown RBP7.04□□□□□ -1.28
UBX2YML013W ALD4P46367 519 aaKnown RBP7.03□□□□□ -1.28
UBX2YML013W YAF9P53930 226 aa7.03□□□□□ -1.28
UBX2YML013W ERG12P07277 443 aa7.03□□□□□ -1.28
UBX2YML013W NOB1Q08444 459 aaKnown RBP7.03□□□□□ -1.28
UBX2YML013W UFD4P33202 1483 aa7.02□□□□□ -1.29
UBX2YML013W TIF1P10081 395 aaKnown RBP7.02□□□□□ -1.29
UBX2YML013W HAT1Q12341 374 aa7.02□□□□□ -1.29
UBX2YML013W ECM5Q03214 1411 aa7□□□□□ -1.29
UBX2YML013W TTI1P36097 1038 aa7□□□□□ -1.29
UBX2YML013W NMD2P38798 1089 aaKnown RBP7□□□□□ -1.29
UBX2YML013W OSW7P43611 510 aa7□□□□□ -1.29
UBX2YML013W MRM1P25270 412 aa6.99□□□□□ -1.29
UBX2YML013W BBC1P47068 1157 aa6.99□□□□□ -1.29
UBX2YML013W CSN12P47130 423 aa6.99□□□□□ -1.29
UBX2YML013W GIN4Q12263 1142 aa6.99□□□□□ -1.29
UBX2YML013W COX6P00427 148 aa6.98□□□□□ -1.29
UBX2YML013W HOP09932 586 aa6.98□□□□□ -1.29
UBX2YML013W NNF1P47149 201 aa6.98□□□□□ -1.29
UBX2YML013W YPR204WQ08995 1032 aa6.98□□□□□ -1.29
UBX2YML013W BUD4P47136 1447 aa6.98□□□□□ -1.29
UBX2YML013W THO2P53552 1597 aaKnown RBP6.98□□□□□ -1.29
UBX2YML013W KEX1P09620 729 aa6.97□□□□□ -1.29
UBX2YML013W COQ8P27697 501 aa6.97□□□□□ -1.29
UBX2YML013W STH1P32597 1359 aa6.96□□□□□ -1.3
UBX2YML013W CST6P40535 587 aa6.96□□□□□ -1.3
UBX2YML013W MNN4P36044 1178 aa6.95□□□□□ -1.3
UBX2YML013W RTG3P38165 486 aa6.95□□□□□ -1.3
UBX2YML013W IPL1P38991 367 aa6.95□□□□□ -1.3
UBX2YML013W TPO2P53283 614 aa6.95□□□□□ -1.3
UBX2YML013W TFC8Q12308 588 aa6.95□□□□□ -1.3
UBX2YML013W ALD2P47771 506 aa6.95□□□□□ -1.3
UBX2YML013W MDG1P53885 366 aa6.95□□□□□ -1.3
UBX2YML013W BUD21Q08492 214 aaPredicted RBP6.95□□□□□ -1.3
UBX2YML013W RTG2P32608 588 aaKnown RBP6.94□□□□□ -1.3
UBX2YML013W TCB2P48231 1178 aa6.94□□□□□ -1.3
UBX2YML013W SPP41P38904 1435 aa6.93□□□□□ -1.3
UBX2YML013W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
UBX2YML013W YML083CQ04526 418 aa6.93□□□□□ -1.3
UBX2YML013W TSR3Q12094 313 aaKnown RBP6.93□□□□□ -1.3
UBX2YML013W STM1P39015 273 aaKnown RBP6.92□□□□□ -1.3
UBX2YML013W POL5P39985 1022 aaKnown RBP6.92□□□□□ -1.3
UBX2YML013W UBX5Q06682 500 aa6.92□□□□□ -1.3
UBX2YML013W NOP53Q12080 455 aaKnown RBP6.92□□□□□ -1.3
UBX2YML013W TOM20P35180 183 aa6.91□□□□□ -1.3
UBX2YML013W RNH70P53331 553 aa6.91□□□□□ -1.3
UBX2YML013W REV3P14284 1504 aa6.91□□□□□ -1.3
UBX2YML013W SPT7P35177 1332 aa6.91□□□□□ -1.3
UBX2YML013W DCD1P06773 312 aa6.9□□□□□ -1.3
UBX2YML013W SEC20P28791 383 aa6.9□□□□□ -1.3
UBX2YML013W YBL036CP38197 257 aa6.9□□□□□ -1.3
UBX2YML013W UBP14P38237 781 aaKnown RBP6.9□□□□□ -1.3
UBX2YML013W AAD16Q02895 342 aa6.9□□□□□ -1.3
UBX2YML013W PDR1P12383 1068 aa6.89□□□□□ -1.31
UBX2YML013W PUP1P25043 261 aa6.89□□□□□ -1.31
UBX2YML013W NAB3P38996 802 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
UBX2YML013W BIO2P32451 375 aa6.88□□□□□ -1.31
UBX2YML013W SEC3P33332 1336 aaKnown RBP6.88□□□□□ -1.31
UBX2YML013W CLC1P17891 233 aa6.87□□□□□ -1.31
UBX2YML013W SVF1Q05515 481 aa6.87□□□□□ -1.31
UBX2YML013W TRM732Q03496 1420 aa6.87□□□□□ -1.31
UBX2YML013W RRP14P36080 434 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms