RNA–Protein interactions for RNA: YLR388W

RPS29A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29A, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29A	YLR388W	LAM6	Q08001	693 aa		3.3	□□□□□ -1.88
RPS29A	YLR388W	SSA1	P10591	642 aa	Known RBP	3.29	□□□□□ -1.88
RPS29A	YLR388W	KIN1	P13185	1064 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	RTG1	P32607	177 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	GEF1	P37020	779 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	YJR008W	P47085	338 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	RSM7	P47150	247 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	HGH1	P48362	394 aa	Known RBP	3.29	□□□□□ -1.88
RPS29A	YLR388W	VPS72	Q03388	795 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	NCR1	Q12200	1170 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	GIN4	Q12263	1142 aa		3.29	□□□□□ -1.88
RPS29A	YLR388W	EAP1	P36041	632 aa	Known RBP	3.28	□□□□□ -1.88
RPS29A	YLR388W	MRX12	P47084	519 aa		3.28	□□□□□ -1.88
RPS29A	YLR388W	PIB1	Q06651	286 aa		3.28	□□□□□ -1.88
RPS29A	YLR388W	YAH1	Q12184	172 aa	Known RBP	3.28	□□□□□ -1.88
RPS29A	YLR388W	MSB4	Q12317	492 aa		3.28	□□□□□ -1.88
RPS29A	YLR388W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.28	□□□□□ -1.88	not detected
RPS29A	YLR388W	ASF1	P32447	279 aa		3.27	□□□□□ -1.89
RPS29A	YLR388W	MNN4	P36044	1178 aa		3.27	□□□□□ -1.89
RPS29A	YLR388W	SPC42	P36094	363 aa		3.27	□□□□□ -1.89
RPS29A	YLR388W	TPO2	P53283	614 aa		3.26	□□□□□ -1.89
RPS29A	YLR388W	FAR11	P53917	953 aa		3.26	□□□□□ -1.89
RPS29A	YLR388W	SUB2	Q07478	446 aa	Known RBP	3.26	□□□□□ -1.89
RPS29A	YLR388W	MAM3	Q12296	706 aa		3.26	□□□□□ -1.89
RPS29A	YLR388W	YTA7	P40340	1379 aa		3.25	□□□□□ -1.89
RPS29A	YLR388W	PAM1	P37304	830 aa	Known RBP	3.25	□□□□□ -1.89
RPS29A	YLR388W	VPS70	P47161	811 aa		3.25	□□□□□ -1.89
RPS29A	YLR388W	TRP5	P00931	707 aa	Known RBP	3.24	□□□□□ -1.89
RPS29A	YLR388W	SLD2	P34252	453 aa		3.24	□□□□□ -1.89
RPS29A	YLR388W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
RPS29A	YLR388W	YNL035C	P53962	389 aa	Known RBP	3.24	□□□□□ -1.89
RPS29A	YLR388W	BUD21	Q08492	214 aa	Predicted RBP	3.24	□□□□□ -1.89
RPS29A	YLR388W	RRN6	P32786	894 aa		3.23	□□□□□ -1.89
RPS29A	YLR388W	SEC61	P32915	480 aa		3.23	□□□□□ -1.89
RPS29A	YLR388W	BCK2	P33306	851 aa		3.23	□□□□□ -1.89
RPS29A	YLR388W	SSF1	P38789	453 aa	Predicted RBP	3.23	□□□□□ -1.89
RPS29A	YLR388W	RPS0B	P46654	252 aa	Known RBP	3.23	□□□□□ -1.89
RPS29A	YLR388W	YLR271W	Q06152	274 aa		3.23	□□□□□ -1.89
RPS29A	YLR388W	GLC3	P32775	704 aa		3.22	□□□□□ -1.89
RPS29A	YLR388W	GUA1	P38625	525 aa	Known RBP	3.22	□□□□□ -1.89
RPS29A	YLR388W	MGA2	P40578	1113 aa		3.22	□□□□□ -1.89
RPS29A	YLR388W	SET4	P42948	560 aa		3.22	□□□□□ -1.89
RPS29A	YLR388W	OSW7	P43611	510 aa		3.22	□□□□□ -1.89
RPS29A	YLR388W	YOL036W	Q08206	761 aa		3.22	□□□□□ -1.89
RPS29A	YLR388W	TFG1	P41895	735 aa	Predicted RBP	3.21	□□□□□ -1.9
RPS29A	YLR388W	YNR021W	P53723	404 aa	Known RBP	3.21	□□□□□ -1.9
RPS29A	YLR388W	DOS2	P54858	310 aa		3.21	□□□□□ -1.9
RPS29A	YLR388W	PDR1	P12383	1068 aa		3.19	□□□□□ -1.9
RPS29A	YLR388W	CHL1	P22516	861 aa	Predicted RBP	3.19	□□□□□ -1.9
RPS29A	YLR388W	DSF2	P38213	736 aa		3.19	□□□□□ -1.9
RPS29A	YLR388W	SAP30	P38429	201 aa		3.19	□□□□□ -1.9
RPS29A	YLR388W	OCA5	P38738	679 aa		3.19	□□□□□ -1.9
RPS29A	YLR388W	SET1	P38827	1080 aa	Known RBP	3.19	□□□□□ -1.9
RPS29A	YLR388W	ALD4	P46367	519 aa	Known RBP	3.19	□□□□□ -1.9
RPS29A	YLR388W	ZDS1	P50111	915 aa	Known RBP	3.18	□□□□□ -1.9
RPS29A	YLR388W	YAF9	P53930	226 aa		3.18	□□□□□ -1.9
RPS29A	YLR388W	TFB3	Q03290	321 aa		3.18	□□□□□ -1.9
RPS29A	YLR388W	CST9	Q06032	482 aa		3.18	□□□□□ -1.9
RPS29A	YLR388W	PBS2	P08018	668 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	HEM3	P28789	327 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	TOA1	P32773	286 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
RPS29A	YLR388W	AIM21	P40563	679 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	KIP3	P53086	805 aa	Known RBP	3.17	□□□□□ -1.9
RPS29A	YLR388W	YPR148C	Q06523	435 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	AIM7	Q12156	149 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	HIF1	Q12373	385 aa		3.17	□□□□□ -1.9
RPS29A	YLR388W	SSA4	P22202	642 aa	Known RBP	3.16	□□□□□ -1.9
RPS29A	YLR388W	MRM1	P25270	412 aa		3.16	□□□□□ -1.9
RPS29A	YLR388W	PRE3	P38624	215 aa		3.16	□□□□□ -1.9
RPS29A	YLR388W	CWC22	P53333	577 aa	Known RBP	3.16	□□□□□ -1.9
RPS29A	YLR388W	ITT1	Q04638	464 aa		3.16	□□□□□ -1.9
RPS29A	YLR388W	RGA2	Q06407	1009 aa		3.16	□□□□□ -1.9
RPS29A	YLR388W	UBX5	Q06682	500 aa		3.16	□□□□□ -1.9
RPS29A	YLR388W	TOM20	P35180	183 aa		3.15	□□□□□ -1.91
RPS29A	YLR388W	EBP2	P36049	427 aa	Known RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	NMD2	P38798	1089 aa	Known RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	CST6	P40535	587 aa		3.15	□□□□□ -1.91
RPS29A	YLR388W	DAN4	P47179	1161 aa		3.15	□□□□□ -1.91
RPS29A	YLR388W	PSD2	P53037	1138 aa	Known RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	RPL34A	P87262	121 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	SEN54	Q02825	467 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	FPR4	Q06205	392 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS29A	YLR388W	PKC1	P24583	1151 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	TSR4	P25040	408 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	CDC3	P32457	520 aa	Known RBP	3.14	□□□□□ -1.91
RPS29A	YLR388W	ISW1	P38144	1129 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	BIM1	P40013	344 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	RNH70	P53331	553 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	HPC2	Q01448	625 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	YDL129W	Q07555	291 aa		3.14	□□□□□ -1.91
RPS29A	YLR388W	GAL11	P19659	1081 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	DIT2	P21595	489 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	DBP1	P24784	617 aa	Known RBP	3.13	□□□□□ -1.91
RPS29A	YLR388W	TY4A-J	P47023	414 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	YJL007C	P47080	104 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
RPS29A	YLR388W	JIP4	Q03361	876 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	SAM3	Q08986	587 aa		3.13	□□□□□ -1.91
RPS29A	YLR388W	KEX1	P09620	729 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms