RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	EDS1	P38073	919 aa		7.74	□□□□□ -1.17
DBP9	YLR276C	ATF2	P53296	535 aa		7.74	□□□□□ -1.17
DBP9	YLR276C	AIM44	Q99299	758 aa		7.73	□□□□□ -1.17
DBP9	YLR276C	SIS2	P36024	562 aa		7.71	□□□□□ -1.17
DBP9	YLR276C	PKC1	P24583	1151 aa		7.69	□□□□□ -1.18
DBP9	YLR276C	MIF2	P35201	549 aa		7.67	□□□□□ -1.18
DBP9	YLR276C	STS1	P38637	319 aa		7.66	□□□□□ -1.18
DBP9	YLR276C	BRL1	P38770	471 aa		7.66	□□□□□ -1.18
DBP9	YLR276C	GLN1	P32288	370 aa	Known RBP	7.65	□□□□□ -1.18
DBP9	YLR276C	SGS1	P35187	1447 aa		7.65	□□□□□ -1.19
DBP9	YLR276C	BIM1	P40013	344 aa		7.63	□□□□□ -1.19
DBP9	YLR276C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	not detected
DBP9	YLR276C	YDR090C	Q03193	310 aa		7.62	□□□□□ -1.19
DBP9	YLR276C	NAP1	P25293	417 aa	Known RBP	7.61	□□□□□ -1.19
DBP9	YLR276C	ATG32	P40458	529 aa		7.61	□□□□□ -1.19
DBP9	YLR276C	SCY1	P53009	804 aa		7.61	□□□□□ -1.19
DBP9	YLR276C	SSA2	P10592	639 aa	Known RBP	7.6	□□□□□ -1.19
DBP9	YLR276C	PTC3	P34221	468 aa	Known RBP	7.59	□□□□□ -1.19
DBP9	YLR276C	YJL007C	P47080	104 aa		7.59	□□□□□ -1.2
DBP9	YLR276C	MRX12	P47084	519 aa		7.58	□□□□□ -1.2
DBP9	YLR276C	CSN12	P47130	423 aa		7.58	□□□□□ -1.2
DBP9	YLR276C	UBP14	P38237	781 aa	Known RBP	7.57	□□□□□ -1.2
DBP9	YLR276C	SSA4	P22202	642 aa	Known RBP	7.56	□□□□□ -1.2
DBP9	YLR276C	DBP1	P24784	617 aa	Known RBP	7.56	□□□□□ -1.2
DBP9	YLR276C	YFR006W	P43590	535 aa		7.55	□□□□□ -1.2
DBP9	YLR276C	IOC4	Q04213	475 aa		7.55	□□□□□ -1.2
DBP9	YLR276C	VHR2	P40041	505 aa		7.54	□□□□□ -1.2
DBP9	YLR276C	KTR1	P27810	393 aa	Known RBP	7.53	□□□□□ -1.2
DBP9	YLR276C	PSE1	P32337	1089 aa	Known RBP	7.53	□□□□□ -1.2
DBP9	YLR276C	TIF1	P10081	395 aa	Known RBP	7.52	□□□□□ -1.21
DBP9	YLR276C	ERG12	P07277	443 aa		7.51	□□□□□ -1.21
DBP9	YLR276C	BUD31	P25337	157 aa	Predicted RBP	7.51	□□□□□ -1.21
DBP9	YLR276C	YLR326W	Q06170	240 aa	Known RBP	7.51	□□□□□ -1.21
DBP9	YLR276C	CPS1	P27614	576 aa		7.48	□□□□□ -1.21
DBP9	YLR276C	NOB1	Q08444	459 aa	Known RBP	7.48	□□□□□ -1.21
DBP9	YLR276C	TTI1	P36097	1038 aa		7.48	□□□□□ -1.21
DBP9	YLR276C	NOP7	P53261	605 aa	Known RBP	7.48	□□□□□ -1.21
DBP9	YLR276C	TCB3	Q03640	1545 aa	Known RBP	7.47	□□□□□ -1.21
DBP9	YLR276C	SLD2	P34252	453 aa		7.47	□□□□□ -1.21
DBP9	YLR276C	MAP2	P38174	421 aa	Known RBP	7.47	□□□□□ -1.21
DBP9	YLR276C	BIO2	P32451	375 aa		7.45	□□□□□ -1.22
DBP9	YLR276C	RPL34B	P40525	121 aa	Known RBP	7.45	□□□□□ -1.22
DBP9	YLR276C	UBP10	P53874	792 aa	Predicted RBP	7.45	□□□□□ -1.22
DBP9	YLR276C	YOR238W	Q08634	303 aa		7.45	□□□□□ -1.22
DBP9	YLR276C	SNU71	P53207	620 aa	Known RBP	7.44	□□□□□ -1.22
DBP9	YLR276C	SEN54	Q02825	467 aa	Predicted RBP	7.44	□□□□□ -1.22
DBP9	YLR276C	CDC3	P32457	520 aa	Known RBP	7.43	□□□□□ -1.22
DBP9	YLR276C	PAM1	P37304	830 aa	Known RBP	7.43	□□□□□ -1.22
DBP9	YLR276C	SSF1	P38789	453 aa	Predicted RBP	7.43	□□□□□ -1.22
DBP9	YLR276C	TYW1	Q08960	810 aa	Known RBP	7.43	□□□□□ -1.22
DBP9	YLR276C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.43	□□□□□ -1.22	not detected
DBP9	YLR276C	YBL036C	P38197	257 aa		7.42	□□□□□ -1.22
DBP9	YLR276C	ENP1	P38333	483 aa	Known RBP	7.42	□□□□□ -1.22
DBP9	YLR276C	KIC1	P38692	1080 aa		7.42	□□□□□ -1.22
DBP9	YLR276C	TEA1	P47988	759 aa		7.42	□□□□□ -1.22
DBP9	YLR276C	RPL34A	P87262	121 aa	Predicted RBP	7.42	□□□□□ -1.22
DBP9	YLR276C	YPR204W	Q08995	1032 aa		7.42	□□□□□ -1.22
DBP9	YLR276C	RTG2	P32608	588 aa	Known RBP	7.41	□□□□□ -1.22
DBP9	YLR276C	ORC6	P38826	435 aa		7.41	□□□□□ -1.22
DBP9	YLR276C	YGR273C	P53329	174 aa		7.41	□□□□□ -1.22
DBP9	YLR276C	RAD54	P32863	898 aa		7.39	□□□□□ -1.23
DBP9	YLR276C	YFR016C	P43597	1233 aa	Known RBP	7.39	□□□□□ -1.23
DBP9	YLR276C	KEX1	P09620	729 aa		7.38	□□□□□ -1.23
DBP9	YLR276C	HEM3	P28789	327 aa		7.38	□□□□□ -1.23
DBP9	YLR276C	GUT1	P32190	709 aa		7.38	□□□□□ -1.23
DBP9	YLR276C	RRN6	P32786	894 aa		7.38	□□□□□ -1.23
DBP9	YLR276C	SLX5	P32828	619 aa	Known RBP	7.38	□□□□□ -1.23
DBP9	YLR276C	YML083C	Q04526	418 aa		7.38	□□□□□ -1.23
DBP9	YLR276C	VMA1	P17255	1071 aa	Known RBP	7.37	□□□□□ -1.23
DBP9	YLR276C	PUP1	P25043	261 aa		7.37	□□□□□ -1.23
DBP9	YLR276C	ATH1	P48016	1211 aa		7.37	□□□□□ -1.23
DBP9	YLR276C	SUP45	P12385	437 aa	Known RBP	7.36	□□□□□ -1.23
DBP9	YLR276C	SOL3	P38858	249 aa		7.36	□□□□□ -1.23
DBP9	YLR276C	YNL108C	P53929	270 aa		7.36	□□□□□ -1.23
DBP9	YLR276C	GRE2	Q12068	342 aa	Known RBP	7.36	□□□□□ -1.23
DBP9	YLR276C	RGR1	P19263	1082 aa		7.36	□□□□□ -1.23
DBP9	YLR276C	CSE4	P36012	229 aa		7.36	□□□□□ -1.23
DBP9	YLR276C	MET10	P39692	1035 aa		7.36	□□□□□ -1.23
DBP9	YLR276C	TCB2	P48231	1178 aa		7.34	□□□□□ -1.23
DBP9	YLR276C	HST2	P53686	357 aa		7.34	□□□□□ -1.23
DBP9	YLR276C	NIS1	P53939	407 aa		7.34	□□□□□ -1.23
DBP9	YLR276C	RAD59	Q12223	238 aa		7.33	□□□□□ -1.24
DBP9	YLR276C	HAT1	Q12341	374 aa		7.33	□□□□□ -1.24
DBP9	YLR276C	MMS22	Q06164	1454 aa		7.33	□□□□□ -1.24
DBP9	YLR276C	CHD1	P32657	1468 aa		7.32	□□□□□ -1.24
DBP9	YLR276C	FPK1	P53739	893 aa		7.32	□□□□□ -1.24
DBP9	YLR276C	STH1	P32597	1359 aa		7.31	□□□□□ -1.24
DBP9	YLR276C	MRX10	Q05648	414 aa		7.31	□□□□□ -1.24
DBP9	YLR276C	PIB1	Q06651	286 aa		7.31	□□□□□ -1.24
DBP9	YLR276C	UFD4	P33202	1483 aa		7.31	□□□□□ -1.24
DBP9	YLR276C	CLB5	P30283	435 aa		7.31	□□□□□ -1.24
DBP9	YLR276C	MVP1	P40959	511 aa	Known RBP	7.31	□□□□□ -1.24
DBP9	YLR276C	ENO1	P00924	437 aa	Known RBP	7.3	□□□□□ -1.24
DBP9	YLR276C	NST1	P53935	1240 aa		7.3	□□□□□ -1.24
DBP9	YLR276C	PKH3	Q03306	898 aa	Predicted RBP	7.29	□□□□□ -1.24
DBP9	YLR276C	ENO2	P00925	437 aa	Known RBP	7.28	□□□□□ -1.24
DBP9	YLR276C	ESS1	P22696	170 aa		7.28	□□□□□ -1.24
DBP9	YLR276C	GAP1	P19145	602 aa	Predicted RBP	7.28	□□□□□ -1.24
DBP9	YLR276C	SCJ1	P25303	377 aa		7.28	□□□□□ -1.24
DBP9	YLR276C	SAM3	Q08986	587 aa		7.28	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms