RNA–Protein interactions for RNA: YLR245C

CDD1, Transcript of Cytidine deaminase, yeastyeast

Gene CDD1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDD1YLR245C TSC11P40061 1430 aa13.76□□□□□ -0.21
CDD1YLR245C MLP2P40457 1679 aa13.75□□□□□ -0.21
CDD1YLR245C SNQ2P32568 1501 aaKnown RBP13.71□□□□□ -0.21
CDD1YLR245C MYO4P32492 1471 aa13.71□□□□□ -0.21
CDD1YLR245C ULS1Q08562 1619 aa13.68□□□□□ -0.22
CDD1YLR245C VPS15P22219 1454 aa13.66□□□□□ -0.22
CDD1YLR245C LTE1P07866 1435 aa13.65□□□□□ -0.22
CDD1YLR245C SPO14P36126 1683 aa13.63□□□□□ -0.23
CDD1YLR245C YTA7P40340 1379 aa13.62□□□□□ -0.23
CDD1YLR245C GEA2P39993 1459 aaKnown RBP13.61□□□□□ -0.23
CDD1YLR245C PDR15Q04182 1529 aaKnown RBP13.56□□□□□ -0.24
CDD1YLR245C ITT1Q04638 464 aa13.54□□□□□ -0.24
CDD1YLR245C DOP1Q03921 1698 aa13.53□□□□□ -0.24
CDD1YLR245C SNT2P53127 1403 aa13.52□□□□□ -0.25
CDD1YLR245C SAS10Q12136 610 aaPredicted RBP13.51□□□□□ -0.25
CDD1YLR245C STH1P32597 1359 aa13.46□□□□□ -0.25
CDD1YLR245C NUP170P38181 1502 aa13.44□□□□□ -0.26
CDD1YLR245C IRC20Q06554 1556 aa13.43□□□□□ -0.26
CDD1YLR245C MMS1Q06211 1407 aa13.41□□□□□ -0.26
CDD1YLR245C GDB1Q06625 1536 aa13.4□□□□□ -0.26
CDD1YLR245C DRS2P39524 1355 aa13.39□□□□□ -0.27
CDD1YLR245C YBT1P32386 1661 aa13.38□□□□□ -0.27
CDD1YLR245C DNF2Q12675 1612 aa13.38□□□□□ -0.27
CDD1YLR245C PDR12Q02785 1511 aa13.35□□□□□ -0.27
CDD1YLR245C RTT106P40161 455 aa13.34□□□□□ -0.27
CDD1YLR245C BUD3P25558 1636 aa13.33□□□□□ -0.28
CDD1YLR245C IFH1P39520 1085 aa13.33□□□□□ -0.28
CDD1YLR245C TY3B-GQ99315 1547 aa13.32□□□□□ -0.28
CDD1YLR245C NUP157P40064 1391 aaKnown RBP13.29□□□□□ -0.28
CDD1YLR245C MET10P39692 1035 aa13.28□□□□□ -0.28
CDD1YLR245C PDR10P51533 1564 aa13.27□□□□□ -0.29
CDD1YLR245C CHC1P22137 1653 aaKnown RBP13.24□□□□□ -0.29
CDD1YLR245C IQG1Q12280 1495 aa13.23□□□□□ -0.29
CDD1YLR245C GEA1P47102 1408 aaPredicted RBP13.22□□□□□ -0.29
CDD1YLR245C ABP1P15891 592 aaKnown RBP13.2□□□□□ -0.3
CDD1YLR245C ARO1P08566 1588 aaKnown RBP13.18□□□□□ -0.3
CDD1YLR245C MIF2P35201 549 aa13.11□□□□□ -0.31
CDD1YLR245C SEC7P11075 2009 aaKnown RBP13.07□□□□□ -0.32
CDD1YLR245C YOR093CQ12275 1648 aa13.06□□□□□ -0.32
CDD1YLR245C TRM3Q07527 1436 aa13.05□□□□□ -0.32
CDD1YLR245C TAF7Q05021 590 aa13.04□□□□□ -0.32
CDD1YLR245C CAT8P39113 1433 aa13□□□□□ -0.33
CDD1YLR245C CKB1P43639 278 aa13□□□□□ -0.33
CDD1YLR245C YSP2Q06681 1438 aa12.96□□□□□ -0.34
CDD1YLR245C DNF3Q12674 1656 aa12.95□□□□□ -0.34
CDD1YLR245C USO1P25386 1790 aa12.87□□□□□ -0.35
CDD1YLR245C BNR1P40450 1375 aa12.85□□□□□ -0.35
CDD1YLR245C YFR006WP43590 535 aa12.81□□□□□ -0.36
CDD1YLR245C VMR1P38735 1592 aa12.77□□□□□ -0.36
CDD1YLR245C SRB8P25648 1427 aa12.77□□□□□ -0.37
CDD1YLR245C NUP188P52593 1655 aaKnown RBP12.74□□□□□ -0.37
CDD1YLR245C SSM4P40318 1319 aa12.7□□□□□ -0.38
CDD1YLR245C IML1P47170 1584 aa12.69□□□□□ -0.38
CDD1YLR245C BUD21Q08492 214 aaPredicted RBP12.62□□□□□ -0.39
CDD1YLR245C YAP3P38749 330 aa12.61□□□□□ -0.39
CDD1YLR245C IKI3Q06706 1349 aaKnown RBP12.61□□□□□ -0.39
CDD1YLR245C PDR5P33302 1511 aaKnown RBP12.58□□□□□ -0.4
CDD1YLR245C GCN2P15442 1659 aa12.57□□□□□ -0.4
CDD1YLR245C TYS1P36421 394 aaKnown RBP12.56□□□□□ -0.4
CDD1YLR245C MAK10Q02197 733 aa12.5□□□□□ -0.41
CDD1YLR245C PDR11P40550 1411 aa12.5□□□□□ -0.41
CDD1YLR245C IPL1P38991 367 aa12.46□□□□□ -0.41
CDD1YLR245C URN1Q06525 465 aaKnown RBP12.38□□□□□ -0.43
CDD1YLR245C NUP192P47054 1683 aa12.37□□□□□ -0.43
CDD1YLR245C TY1B-NL2Q99337 1749 aaKnown RBP12.37□□□□□ -0.43
CDD1YLR245C HAP1P0CE41 1502 aa12.28□□□□□ -0.44
CDD1YLR245C KRE5P22023 1365 aa12.28□□□□□ -0.44
CDD1YLR245C THI12P42883 340 aa12.27□□□□□ -0.45
CDD1YLR245C THI5P43534 340 aa12.27□□□□□ -0.45
CDD1YLR245C THI11P47183 340 aa12.27□□□□□ -0.45
CDD1YLR245C THI13Q07748 340 aa12.27□□□□□ -0.45
CDD1YLR245C RIA1P53893 1110 aa12.18□□□□□ -0.46
CDD1YLR245C RAD9P14737 1309 aa12.16□□□□□ -0.46
CDD1YLR245C BCK1Q01389 1478 aa12.16□□□□□ -0.46
CDD1YLR245C RAV1P47104 1357 aa12.16□□□□□ -0.46
CDD1YLR245C CAB1Q04430 367 aa12.12□□□□□ -0.47
CDD1YLR245C TY3B-IQ7LHG5 1498 aaKnown RBP12.1□□□□□ -0.47
CDD1YLR245C TY4B-HP0C2J7 1802 aa12.1□□□□□ -0.47
CDD1YLR245C TY4B-JP47024 1803 aa12.1□□□□□ -0.47
CDD1YLR245C CFT1Q06632 1357 aaKnown RBP12.09□□□□□ -0.47
CDD1YLR245C PAF1P38351 445 aa12.09□□□□□ -0.47
CDD1YLR245C MRX12P47084 519 aa12.09□□□□□ -0.47
CDD1YLR245C YMR196WQ04336 1088 aa12.07□□□□□ -0.48
CDD1YLR245C BFR2Q06631 534 aaKnown RBP12.07□□□□□ -0.48
CDD1YLR245C RTC1Q08281 1341 aa12.05□□□□□ -0.48
CDD1YLR245C NOP7P53261 605 aaKnown RBP12.04□□□□□ -0.48
CDD1YLR245C YNR029CP53729 429 aaKnown RBP12.04□□□□□ -0.48
CDD1YLR245C TAF5P38129 798 aa12.01□□□□□ -0.49
CDD1YLR245C RRP5Q05022 1729 aaKnown RBP11.99□□□□□ -0.49
CDD1YLR245C ALD4P46367 519 aaKnown RBP11.98□□□□□ -0.49
CDD1YLR245C APP1P53933 587 aa11.96□□□□□ -0.49
CDD1YLR245C ORC1P54784 914 aaPredicted RBP11.94□□□□□ -0.5
CDD1YLR245C YIL177CP40434 1758 aa11.92□□□□□ -0.5
CDD1YLR245C YJL225CP40889 1758 aa11.92□□□□□ -0.5
CDD1YLR245C YRF1-2P40105 1681 aa11.92□□□□□ -0.5
CDD1YLR245C TAF8Q03750 510 aa11.92□□□□□ -0.5
CDD1YLR245C RCM1P53972 490 aa11.89□□□□□ -0.51
CDD1YLR245C PTP3P40048 928 aa11.88□□□□□ -0.51
CDD1YLR245C PPH3P32345 308 aa11.85□□□□□ -0.51
CDD1YLR245C REB1P21538 810 aa11.84□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms