RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W TIF4632P39936 914 aaKnown RBP3.79□□□□□ -1.8
HRD3YLR207W ATH1P48016 1211 aa3.79□□□□□ -1.8
HRD3YLR207W VHR2P40041 505 aa3.78□□□□□ -1.8
HRD3YLR207W HPC2Q01448 625 aa3.78□□□□□ -1.8
HRD3YLR207W PIB1Q06651 286 aa3.77□□□□□ -1.81
HRD3YLR207W SSA2P10592 639 aaKnown RBP3.77□□□□□ -1.81
HRD3YLR207W YAP5P40574 245 aa3.76□□□□□ -1.81
HRD3YLR207W GRE2Q12068 342 aaKnown RBP3.76□□□□□ -1.81
HRD3YLR207W TFB3Q03290 321 aa3.76□□□□□ -1.81
HRD3YLR207W AIM44Q99299 758 aa3.76□□□□□ -1.81
HRD3YLR207W GUT1P32190 709 aa3.74□□□□□ -1.81
HRD3YLR207W RAD54P32863 898 aa3.74□□□□□ -1.81
HRD3YLR207W UBP14P38237 781 aaKnown RBP3.74□□□□□ -1.81
HRD3YLR207W CSN12P47130 423 aa3.74□□□□□ -1.81
HRD3YLR207W VMA1P17255 1071 aaKnown RBP3.73□□□□□ -1.81
HRD3YLR207W RPL34BP40525 121 aaKnown RBP3.73□□□□□ -1.81
HRD3YLR207W MON2P48563 1636 aaPredicted RBP3.73□□□□□ -1.81
HRD3YLR207W PSE1P32337 1089 aaKnown RBP3.73□□□□□ -1.81
HRD3YLR207W NSR1P27476 414 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
HRD3YLR207W GTT3P39996 337 aa3.71□□□□□ -1.82
HRD3YLR207W YJL007CP47080 104 aa3.71□□□□□ -1.82
HRD3YLR207W YDR090CQ03193 310 aa3.71□□□□□ -1.82
HRD3YLR207W YLR326WQ06170 240 aaKnown RBP3.71□□□□□ -1.82
HRD3YLR207W TEA1P47988 759 aa3.71□□□□□ -1.82
HRD3YLR207W GYP5Q12344 894 aa3.71□□□□□ -1.82
HRD3YLR207W YGR273CP53329 174 aa3.7□□□□□ -1.82
HRD3YLR207W SSA1P10591 642 aaKnown RBP3.7□□□□□ -1.82
HRD3YLR207W RPP1BP10622 106 aaKnown RBP3.69□□□□□ -1.82
HRD3YLR207W PKC1P24583 1151 aa3.69□□□□□ -1.82
HRD3YLR207W TGL3P40308 642 aa3.69□□□□□ -1.82
HRD3YLR207W KEX1P09620 729 aa3.69□□□□□ -1.82
HRD3YLR207W BIM1P40013 344 aa3.68□□□□□ -1.82
HRD3YLR207W YMR196WQ04336 1088 aa3.68□□□□□ -1.82
HRD3YLR207W SSA4P22202 642 aaKnown RBP3.68□□□□□ -1.82
HRD3YLR207W CLB5P30283 435 aa3.68□□□□□ -1.82
HRD3YLR207W YBL036CP38197 257 aa3.68□□□□□ -1.82
HRD3YLR207W GEF1P37020 779 aa3.67□□□□□ -1.82
HRD3YLR207W PCS60P38137 543 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
HRD3YLR207W DCW1P36091 449 aa3.67□□□□□ -1.82
HRD3YLR207W TCB3Q03640 1545 aaKnown RBP3.66□□□□□ -1.82
HRD3YLR207W SLX8P40072 274 aa3.66□□□□□ -1.82
HRD3YLR207W SAM3Q08986 587 aa3.66□□□□□ -1.82
HRD3YLR207W YML020WQ03722 664 aa3.66□□□□□ -1.82
HRD3YLR207W SUB2Q07478 446 aaKnown RBP3.66□□□□□ -1.82
HRD3YLR207W DNA2P38859 1522 aa3.65□□□□□ -1.82
HRD3YLR207W ATG32P40458 529 aa3.65□□□□□ -1.83
HRD3YLR207W SWR1Q05471 1514 aa3.65□□□□□ -1.83
HRD3YLR207W GLN1P32288 370 aaKnown RBP3.65□□□□□ -1.83
HRD3YLR207W TYW1Q08960 810 aaKnown RBP3.65□□□□□ -1.83
HRD3YLR207W HTA1P04911 132 aaKnown RBP3.64□□□□□ -1.83
HRD3YLR207W HTA2P04912 132 aa3.64□□□□□ -1.83
HRD3YLR207W RPL34AP87262 121 aaPredicted RBP3.64□□□□□ -1.83
HRD3YLR207W ORC6P38826 435 aa3.64□□□□□ -1.83
HRD3YLR207W PEX21P50091 288 aa3.64□□□□□ -1.83
HRD3YLR207W YPR204WQ08995 1032 aa3.64□□□□□ -1.83
HRD3YLR207W PKH3Q03306 898 aaPredicted RBP3.63□□□□□ -1.83
HRD3YLR207W TIF1P10081 395 aaKnown RBP3.63□□□□□ -1.83
HRD3YLR207W MMP1Q12372 583 aa3.63□□□□□ -1.83
HRD3YLR207W RGR1P19263 1082 aa3.62□□□□□ -1.83
HRD3YLR207W RTG2P32608 588 aaKnown RBP3.62□□□□□ -1.83
HRD3YLR207W SLD2P34252 453 aa3.62□□□□□ -1.83
HRD3YLR207W SET4P42948 560 aa3.62□□□□□ -1.83
HRD3YLR207W SOL3P38858 249 aa3.62□□□□□ -1.83
HRD3YLR207W CSC1Q06538 782 aa3.62□□□□□ -1.83
HRD3YLR207W YOL036WQ08206 761 aa3.62□□□□□ -1.83
HRD3YLR207W CSE4P36012 229 aa3.61□□□□□ -1.83
HRD3YLR207W MVP1P40959 511 aaKnown RBP3.61□□□□□ -1.83
HRD3YLR207W YPR109WQ06104 294 aa3.61□□□□□ -1.83
HRD3YLR207W TY1B-DR4Q07793 1604 aa3.61□□□□□ -1.83
HRD3YLR207W AI4P03878 556 aa3.61□□□□□ -1.83
HRD3YLR207W MPH3P0CE00 602 aa3.61□□□□□ -1.83
HRD3YLR207W ARG8P18544 423 aa3.61□□□□□ -1.83
HRD3YLR207W SPA2P23201 1466 aaKnown RBP3.61□□□□□ -1.83
HRD3YLR207W CPS1P27614 576 aa3.61□□□□□ -1.83
HRD3YLR207W KTR1P27810 393 aaKnown RBP3.61□□□□□ -1.83
HRD3YLR207W HST2P53686 357 aa3.61□□□□□ -1.83
HRD3YLR207W FPK1P53739 893 aa3.61□□□□□ -1.83
HRD3YLR207W RAD59Q12223 238 aa3.6□□□□□ -1.83
HRD3YLR207W SPT6P23615 1451 aaKnown RBP3.6□□□□□ -1.83
HRD3YLR207W ERG12P07277 443 aa3.6□□□□□ -1.83
HRD3YLR207W ESS1P22696 170 aa3.6□□□□□ -1.83
HRD3YLR207W YNL108CP53929 270 aa3.6□□□□□ -1.83
HRD3YLR207W NIS1P53939 407 aa3.6□□□□□ -1.83
HRD3YLR207W NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.83
HRD3YLR207W BIO2P32451 375 aa3.59□□□□□ -1.84
HRD3YLR207W TFB4Q12004 338 aa3.59□□□□□ -1.84
HRD3YLR207W MSB4Q12317 492 aa3.59□□□□□ -1.84
HRD3YLR207W TTI1P36097 1038 aa3.58□□□□□ -1.84
HRD3YLR207W HSL1P34244 1518 aa3.58□□□□□ -1.84
HRD3YLR207W SCJ1P25303 377 aa3.58□□□□□ -1.84
HRD3YLR207W SIS2P36024 562 aa3.58□□□□□ -1.84
HRD3YLR207W NOP8Q08287 484 aaPredicted RBP3.58□□□□□ -1.84
HRD3YLR207W SPT5P27692 1063 aaKnown RBP3.57□□□□□ -1.84
HRD3YLR207W CDC3P32457 520 aaKnown RBP3.57□□□□□ -1.84
HRD3YLR207W SLI15P38283 698 aa3.57□□□□□ -1.84
HRD3YLR207W YEL023CP39992 682 aa3.57□□□□□ -1.84
HRD3YLR207W DAN4P47179 1161 aa3.57□□□□□ -1.84
HRD3YLR207W NOP7P53261 605 aaKnown RBP3.57□□□□□ -1.84
HRD3YLR207W WSC3Q12215 556 aa3.57□□□□□ -1.84
HRD3YLR207W MST1P07236 462 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms