RNA–Protein interactions for RNA: YLR133W

CKI1, Transcript of Choline kinase, yeast

Gene CKI1, Length 1,749 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKI1	YLR133W	YRF1-8	P0CX22	1796 aa		11.58	□□□□□ -0.56
CKI1	YLR133W	GEA2	P39993	1459 aa	Known RBP	11.57	□□□□□ -0.56
CKI1	YLR133W	NTE1	Q04958	1679 aa		11.56	□□□□□ -0.56
CKI1	YLR133W	BNI1	P41832	1953 aa		11.53	□□□□□ -0.56
CKI1	YLR133W	RPO21	P04050	1733 aa	Known RBP	11.53	□□□□□ -0.56
CKI1	YLR133W	ITT1	Q04638	464 aa		11.52	□□□□□ -0.56
CKI1	YLR133W	VPS15	P22219	1454 aa		11.52	□□□□□ -0.57
CKI1	YLR133W	STH1	P32597	1359 aa		11.51	□□□□□ -0.57
CKI1	YLR133W	SNQ2	P32568	1501 aa	Known RBP	11.51	□□□□□ -0.57
CKI1	YLR133W	SNT2	P53127	1403 aa		11.49	□□□□□ -0.57
CKI1	YLR133W	MET10	P39692	1035 aa		11.43	□□□□□ -0.58
CKI1	YLR133W	DRS2	P39524	1355 aa		11.43	□□□□□ -0.58
CKI1	YLR133W	RTT106	P40161	455 aa		11.4	□□□□□ -0.58
CKI1	YLR133W	SAS10	Q12136	610 aa	Predicted RBP	11.38	□□□□□ -0.59
CKI1	YLR133W	MMS1	Q06211	1407 aa		11.37	□□□□□ -0.59
CKI1	YLR133W	PDR12	Q02785	1511 aa		11.33	□□□□□ -0.6
CKI1	YLR133W	SPO14	P36126	1683 aa		11.33	□□□□□ -0.6
CKI1	YLR133W	MLP2	P40457	1679 aa		11.33	□□□□□ -0.6
CKI1	YLR133W	TAF7	Q05021	590 aa		11.32	□□□□□ -0.6
CKI1	YLR133W	ULS1	Q08562	1619 aa		11.32	□□□□□ -0.6
CKI1	YLR133W	MIF2	P35201	549 aa		11.32	□□□□□ -0.6
CKI1	YLR133W	NUP170	P38181	1502 aa		11.31	□□□□□ -0.6
CKI1	YLR133W	PDR15	Q04182	1529 aa	Known RBP	11.3	□□□□□ -0.6
CKI1	YLR133W	ABP1	P15891	592 aa	Known RBP	11.29	□□□□□ -0.6
CKI1	YLR133W	BFR2	Q06631	534 aa	Known RBP	11.26	□□□□□ -0.61
CKI1	YLR133W	IRC20	Q06554	1556 aa		11.25	□□□□□ -0.61
CKI1	YLR133W	GDB1	Q06625	1536 aa		11.25	□□□□□ -0.61
CKI1	YLR133W	NUP157	P40064	1391 aa	Known RBP	11.24	□□□□□ -0.61
CKI1	YLR133W	IQG1	Q12280	1495 aa		11.22	□□□□□ -0.61
CKI1	YLR133W	IFH1	P39520	1085 aa		11.21	□□□□□ -0.61
CKI1	YLR133W	DNF2	Q12675	1612 aa		11.16	□□□□□ -0.62
CKI1	YLR133W	PDR10	P51533	1564 aa		11.16	□□□□□ -0.62
CKI1	YLR133W	BUD3	P25558	1636 aa		11.15	□□□□□ -0.62
CKI1	YLR133W	GEA1	P47102	1408 aa	Predicted RBP	11.15	□□□□□ -0.62
CKI1	YLR133W	TRM3	Q07527	1436 aa		11.15	□□□□□ -0.62
CKI1	YLR133W	DOP1	Q03921	1698 aa		11.13	□□□□□ -0.63
CKI1	YLR133W	CAT8	P39113	1433 aa		11.11	□□□□□ -0.63
CKI1	YLR133W	TY3B-G	Q99315	1547 aa		11.07	□□□□□ -0.64
CKI1	YLR133W	YBT1	P32386	1661 aa		11.03	□□□□□ -0.64
CKI1	YLR133W	ARO1	P08566	1588 aa	Known RBP	11.02	□□□□□ -0.65
CKI1	YLR133W	CKB1	P43639	278 aa		11.01	□□□□□ -0.65
CKI1	YLR133W	SEC7	P11075	2009 aa	Known RBP	11.01	□□□□□ -0.65
CKI1	YLR133W	YSP2	Q06681	1438 aa		10.99	□□□□□ -0.65
CKI1	YLR133W	CHC1	P22137	1653 aa	Known RBP	10.98	□□□□□ -0.65
CKI1	YLR133W	YFR006W	P43590	535 aa		10.97	□□□□□ -0.65
CKI1	YLR133W	BNR1	P40450	1375 aa		10.93	□□□□□ -0.66
CKI1	YLR133W	YOR093C	Q12275	1648 aa		10.9	□□□□□ -0.66
CKI1	YLR133W	YAP3	P38749	330 aa		10.87	□□□□□ -0.67
CKI1	YLR133W	SRB8	P25648	1427 aa		10.87	□□□□□ -0.67
CKI1	YLR133W	URN1	Q06525	465 aa	Known RBP	10.81	□□□□□ -0.68
CKI1	YLR133W	DNF3	Q12674	1656 aa		10.8	□□□□□ -0.68
CKI1	YLR133W	BUD21	Q08492	214 aa	Predicted RBP	10.78	□□□□□ -0.68
CKI1	YLR133W	IKI3	Q06706	1349 aa	Known RBP	10.75	□□□□□ -0.69
CKI1	YLR133W	MAK10	Q02197	733 aa		10.72	□□□□□ -0.69
CKI1	YLR133W	IPL1	P38991	367 aa		10.7	□□□□□ -0.7
CKI1	YLR133W	NUP188	P52593	1655 aa	Known RBP	10.64	□□□□□ -0.71
CKI1	YLR133W	SSM4	P40318	1319 aa		10.64	□□□□□ -0.71
CKI1	YLR133W	TYS1	P36421	394 aa	Known RBP	10.63	□□□□□ -0.71
CKI1	YLR133W	HAP1	P0CE41	1502 aa		10.61	□□□□□ -0.71
CKI1	YLR133W	VMR1	P38735	1592 aa		10.59	□□□□□ -0.71
CKI1	YLR133W	IML1	P47170	1584 aa		10.56	□□□□□ -0.72
CKI1	YLR133W	PDR5	P33302	1511 aa	Known RBP	10.54	□□□□□ -0.72
CKI1	YLR133W	USO1	P25386	1790 aa		10.54	□□□□□ -0.72
CKI1	YLR133W	GCN2	P15442	1659 aa		10.5	□□□□□ -0.73
CKI1	YLR133W	YMR196W	Q04336	1088 aa		10.5	□□□□□ -0.73
CKI1	YLR133W	PDR11	P40550	1411 aa		10.48	□□□□□ -0.73
CKI1	YLR133W	TY1B-NL2	Q99337	1749 aa	Known RBP	10.47	□□□□□ -0.73
CKI1	YLR133W	THI12	P42883	340 aa		10.44	□□□□□ -0.74
CKI1	YLR133W	THI5	P43534	340 aa		10.44	□□□□□ -0.74
CKI1	YLR133W	THI11	P47183	340 aa		10.44	□□□□□ -0.74
CKI1	YLR133W	THI13	Q07748	340 aa		10.44	□□□□□ -0.74
CKI1	YLR133W	PAF1	P38351	445 aa		10.38	□□□□□ -0.75
CKI1	YLR133W	RAV1	P47104	1357 aa		10.36	□□□□□ -0.75
CKI1	YLR133W	TFA1	P36100	482 aa		10.34	□□□□□ -0.75
CKI1	YLR133W	MRX12	P47084	519 aa		10.34	□□□□□ -0.75
CKI1	YLR133W	KRE5	P22023	1365 aa		10.34	□□□□□ -0.75
CKI1	YLR133W	CFT1	Q06632	1357 aa	Known RBP	10.33	□□□□□ -0.76
CKI1	YLR133W	RIA1	P53893	1110 aa		10.33	□□□□□ -0.76
CKI1	YLR133W	RTC1	Q08281	1341 aa		10.31	□□□□□ -0.76
CKI1	YLR133W	BCK1	Q01389	1478 aa		10.3	□□□□□ -0.76
CKI1	YLR133W	NOP7	P53261	605 aa	Known RBP	10.28	□□□□□ -0.76
CKI1	YLR133W	ALD4	P46367	519 aa	Known RBP	10.27	□□□□□ -0.76
CKI1	YLR133W	YNR029C	P53729	429 aa	Known RBP	10.27	□□□□□ -0.76
CKI1	YLR133W	CAB1	Q04430	367 aa		10.27	□□□□□ -0.77
CKI1	YLR133W	RAD9	P14737	1309 aa		10.25	□□□□□ -0.77
CKI1	YLR133W	NUP192	P47054	1683 aa		10.23	□□□□□ -0.77
CKI1	YLR133W	PTP3	P40048	928 aa		10.19	□□□□□ -0.78
CKI1	YLR133W	YAH1	Q12184	172 aa	Known RBP	10.19	□□□□□ -0.78
CKI1	YLR133W	ESL2	P36168	1195 aa		10.16	□□□□□ -0.78
CKI1	YLR133W	NAP1	P25293	417 aa	Known RBP	10.13	□□□□□ -0.79
CKI1	YLR133W	TAF5	P38129	798 aa		10.13	□□□□□ -0.79
CKI1	YLR133W	TY3B-I	Q7LHG5	1498 aa	Known RBP	10.12	□□□□□ -0.79
CKI1	YLR133W	TAF8	Q03750	510 aa		10.12	□□□□□ -0.79
CKI1	YLR133W	APP1	P53933	587 aa		10.1	□□□□□ -0.79
CKI1	YLR133W	POL5	P39985	1022 aa	Known RBP	10.07	□□□□□ -0.8
CKI1	YLR133W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.05	□□□□□ -0.8	not detected
CKI1	YLR133W	CPS1	P27614	576 aa		10.05	□□□□□ -0.8
CKI1	YLR133W	RCM1	P53972	490 aa		10.04	□□□□□ -0.8
CKI1	YLR133W	REB1	P21538	810 aa		10.04	□□□□□ -0.8
CKI1	YLR133W	YIL055C	P40523	627 aa	Known RBP	10.04	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms