RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeastyeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF3YLL013C YRF1-8P0CX22 1796 aa9.29□□□□□ -0.92
PUF3YLL013C RPO21P04050 1733 aaKnown RBP9.27□□□□□ -0.93
PUF3YLL013C YTA7P40340 1379 aa9.26□□□□□ -0.93
PUF3YLL013C BNI1P41832 1953 aa9.26□□□□□ -0.93
PUF3YLL013C VPS15P22219 1454 aa9.25□□□□□ -0.93
PUF3YLL013C MYO4P32492 1471 aa9.25□□□□□ -0.93
PUF3YLL013C ITT1Q04638 464 aa9.22□□□□□ -0.93
PUF3YLL013C DRS2P39524 1355 aa9.18□□□□□ -0.94
PUF3YLL013C SNQ2P32568 1501 aaKnown RBP9.18□□□□□ -0.94
PUF3YLL013C STH1P32597 1359 aa9.15□□□□□ -0.95
PUF3YLL013C MIF2P35201 549 aa9.15□□□□□ -0.95
PUF3YLL013C MMS1Q06211 1407 aa9.14□□□□□ -0.95
PUF3YLL013C SNT2P53127 1403 aa9.12□□□□□ -0.95
PUF3YLL013C RTT106P40161 455 aa9.1□□□□□ -0.95
PUF3YLL013C ABP1P15891 592 aaKnown RBP9.1□□□□□ -0.95
PUF3YLL013C MLP2P40457 1679 aa9.1□□□□□ -0.95
PUF3YLL013C NUP170P38181 1502 aa9.09□□□□□ -0.95
PUF3YLL013C MET10P39692 1035 aa9.09□□□□□ -0.95
PUF3YLL013C ULS1Q08562 1619 aa9.08□□□□□ -0.96
PUF3YLL013C SPO14P36126 1683 aa9.08□□□□□ -0.96
PUF3YLL013C SAS10Q12136 610 aaPredicted RBP9.04□□□□□ -0.96
PUF3YLL013C PDR12Q02785 1511 aa9.03□□□□□ -0.96
PUF3YLL013C PDR15Q04182 1529 aaKnown RBP9.03□□□□□ -0.96
PUF3YLL013C DNF2Q12675 1612 aa9.01□□□□□ -0.97
PUF3YLL013C IRC20Q06554 1556 aa9□□□□□ -0.97
PUF3YLL013C GDB1Q06625 1536 aa8.99□□□□□ -0.97
PUF3YLL013C DOP1Q03921 1698 aa8.97□□□□□ -0.97
PUF3YLL013C NUP157P40064 1391 aaKnown RBP8.97□□□□□ -0.97
PUF3YLL013C TAF7Q05021 590 aa8.97□□□□□ -0.97
PUF3YLL013C IQG1Q12280 1495 aa8.96□□□□□ -0.97
PUF3YLL013C PDR10P51533 1564 aa8.95□□□□□ -0.98
PUF3YLL013C IFH1P39520 1085 aa8.93□□□□□ -0.98
PUF3YLL013C TRM3Q07527 1436 aa8.93□□□□□ -0.98
PUF3YLL013C BUD3P25558 1636 aa8.93□□□□□ -0.98
PUF3YLL013C YFR006WP43590 535 aa8.85□□□□□ -0.99
PUF3YLL013C GEA1P47102 1408 aaPredicted RBP8.85□□□□□ -0.99
PUF3YLL013C CHC1P22137 1653 aaKnown RBP8.85□□□□□ -0.99
PUF3YLL013C CAT8P39113 1433 aa8.83□□□□□ -1
PUF3YLL013C YBT1P32386 1661 aa8.83□□□□□ -1
PUF3YLL013C ARO1P08566 1588 aaKnown RBP8.81□□□□□ -1
PUF3YLL013C TY3B-GQ99315 1547 aa8.8□□□□□ -1
PUF3YLL013C SEC7P11075 2009 aaKnown RBP8.79□□□□□ -1
PUF3YLL013C YOR093CQ12275 1648 aa8.78□□□□□ -1
PUF3YLL013C CKB1P43639 278 aa8.77□□□□□ -1.01
PUF3YLL013C BNR1P40450 1375 aa8.72□□□□□ -1.01
PUF3YLL013C YSP2Q06681 1438 aa8.72□□□□□ -1.01
PUF3YLL013C DNF3Q12674 1656 aa8.7□□□□□ -1.02
PUF3YLL013C YAP3P38749 330 aa8.66□□□□□ -1.02
PUF3YLL013C SRB8P25648 1427 aa8.64□□□□□ -1.03
PUF3YLL013C URN1Q06525 465 aaKnown RBP8.6□□□□□ -1.03
PUF3YLL013C BUD21Q08492 214 aaPredicted RBP8.57□□□□□ -1.04
PUF3YLL013C MAK10Q02197 733 aa8.56□□□□□ -1.04
PUF3YLL013C USO1P25386 1790 aa8.53□□□□□ -1.04
PUF3YLL013C NUP188P52593 1655 aaKnown RBP8.52□□□□□ -1.05
PUF3YLL013C IPL1P38991 367 aa8.49□□□□□ -1.05
PUF3YLL013C IML1P47170 1584 aa8.49□□□□□ -1.05
PUF3YLL013C IKI3Q06706 1349 aaKnown RBP8.47□□□□□ -1.05
PUF3YLL013C VMR1P38735 1592 aa8.47□□□□□ -1.05
PUF3YLL013C TYS1P36421 394 aaKnown RBP8.45□□□□□ -1.06
PUF3YLL013C HAP1P0CE41 1502 aa8.44□□□□□ -1.06
PUF3YLL013C TY1B-NL2Q99337 1749 aaKnown RBP8.42□□□□□ -1.06
PUF3YLL013C PDR5P33302 1511 aaKnown RBP8.41□□□□□ -1.06
PUF3YLL013C SSM4P40318 1319 aa8.39□□□□□ -1.07
PUF3YLL013C YMR196WQ04336 1088 aa8.38□□□□□ -1.07
PUF3YLL013C GCN2P15442 1659 aa8.37□□□□□ -1.07
PUF3YLL013C THI12P42883 340 aa8.35□□□□□ -1.07
PUF3YLL013C THI5P43534 340 aa8.35□□□□□ -1.07
PUF3YLL013C THI11P47183 340 aa8.35□□□□□ -1.07
PUF3YLL013C THI13Q07748 340 aa8.35□□□□□ -1.07
PUF3YLL013C PDR11P40550 1411 aa8.3□□□□□ -1.08
PUF3YLL013C PAF1P38351 445 aa8.26□□□□□ -1.09
PUF3YLL013C MRX12P47084 519 aa8.26□□□□□ -1.09
PUF3YLL013C KRE5P22023 1365 aa8.26□□□□□ -1.09
PUF3YLL013C RIA1P53893 1110 aa8.24□□□□□ -1.09
PUF3YLL013C RAV1P47104 1357 aa8.21□□□□□ -1.1
PUF3YLL013C CFT1Q06632 1357 aaKnown RBP8.21□□□□□ -1.1
PUF3YLL013C BCK1Q01389 1478 aa8.21□□□□□ -1.1
PUF3YLL013C NUP192P47054 1683 aa8.19□□□□□ -1.1
PUF3YLL013C BFR2Q06631 534 aaKnown RBP8.18□□□□□ -1.1
PUF3YLL013C YNR029CP53729 429 aaKnown RBP8.17□□□□□ -1.1
PUF3YLL013C NOP7P53261 605 aaKnown RBP8.16□□□□□ -1.1
PUF3YLL013C CAB1Q04430 367 aa8.16□□□□□ -1.1
PUF3YLL013C RTC1Q08281 1341 aa8.15□□□□□ -1.1
PUF3YLL013C RAD9P14737 1309 aa8.15□□□□□ -1.11
PUF3YLL013C ALD4P46367 519 aaKnown RBP8.14□□□□□ -1.11
PUF3YLL013C YAH1Q12184 172 aaKnown RBP8.14□□□□□ -1.11
PUF3YLL013C PTP3P40048 928 aa8.11□□□□□ -1.11
PUF3YLL013C APP1P53933 587 aa8.1□□□□□ -1.11
PUF3YLL013C TY3B-IQ7LHG5 1498 aaKnown RBP8.08□□□□□ -1.12
PUF3YLL013C NAP1P25293 417 aaKnown RBP8.08□□□□□ -1.12
PUF3YLL013C ESL2P36168 1195 aa8.04□□□□□ -1.12
PUF3YLL013C YIL055CP40523 627 aaKnown RBP8.04□□□□□ -1.12
PUF3YLL013C TAF5P38129 798 aa8.04□□□□□ -1.12
PUF3YLL013C REB1P21538 810 aa8.03□□□□□ -1.12
PUF3YLL013C GLN1P32288 370 aaKnown RBP8.03□□□□□ -1.12
PUF3YLL013C TAF8Q03750 510 aa8.03□□□□□ -1.12
PUF3YLL013C ENT1Q12518 454 aa8.01□□□□□ -1.13
PUF3YLL013C RRP5Q05022 1729 aaKnown RBP8□□□□□ -1.13
PUF3YLL013C RCM1P53972 490 aa7.99□□□□□ -1.13
PUF3YLL013C YRF1-2P40105 1681 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms