RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W YGL015CP33199 130 aa7.62□□□□□ -1.19
SIR1YKR101W TFB3Q03290 321 aa7.62□□□□□ -1.19
SIR1YKR101W YLR326WQ06170 240 aaKnown RBP7.6□□□□□ -1.19
SIR1YKR101W VMA1P17255 1071 aaKnown RBP7.59□□□□□ -1.2
SIR1YKR101W PKC1P24583 1151 aa7.58□□□□□ -1.2
SIR1YKR101W NSR1P27476 414 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
SIR1YKR101W ATH1P48016 1211 aa7.53□□□□□ -1.2
SIR1YKR101W GUT1P32190 709 aa7.52□□□□□ -1.21
SIR1YKR101W PCS60P38137 543 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
SIR1YKR101W SOL3P38858 249 aa7.52□□□□□ -1.21
SIR1YKR101W YGR273CP53329 174 aa7.52□□□□□ -1.21
SIR1YKR101W GRE2Q12068 342 aaKnown RBP7.52□□□□□ -1.21
SIR1YKR101W YAP5P40574 245 aa7.51□□□□□ -1.21
SIR1YKR101W PSE1P32337 1089 aaKnown RBP7.5□□□□□ -1.21
SIR1YKR101W KEX1P09620 729 aa7.5□□□□□ -1.21
SIR1YKR101W GLN1P32288 370 aaKnown RBP7.5□□□□□ -1.21
SIR1YKR101W BRL1P38770 471 aa7.5□□□□□ -1.21
SIR1YKR101W CSN12P47130 423 aa7.5□□□□□ -1.21
SIR1YKR101W KTR1P27810 393 aaKnown RBP7.48□□□□□ -1.21
SIR1YKR101W BIM1P40013 344 aa7.48□□□□□ -1.21
SIR1YKR101W RAD54P32863 898 aa7.47□□□□□ -1.21
SIR1YKR101W KIC1P38692 1080 aa7.47□□□□□ -1.21
SIR1YKR101W SSA2P10592 639 aaKnown RBP7.46□□□□□ -1.21
SIR1YKR101W SUB2Q07478 446 aaKnown RBP7.46□□□□□ -1.21
SIR1YKR101W SAM3Q08986 587 aa7.46□□□□□ -1.21
SIR1YKR101W ORC6P38826 435 aa7.46□□□□□ -1.22
SIR1YKR101W ATG32P40458 529 aa7.46□□□□□ -1.22
SIR1YKR101W YJL007CP47080 104 aa7.46□□□□□ -1.22
SIR1YKR101W TIF4632P39936 914 aaKnown RBP7.45□□□□□ -1.22
SIR1YKR101W NST1P53935 1240 aa7.45□□□□□ -1.22
SIR1YKR101W YML020WQ03722 664 aa7.44□□□□□ -1.22
SIR1YKR101W TGL3P40308 642 aa7.42□□□□□ -1.22
SIR1YKR101W TYW1Q08960 810 aaKnown RBP7.42□□□□□ -1.22
SIR1YKR101W SSA1P10591 642 aaKnown RBP7.42□□□□□ -1.22
SIR1YKR101W TEA1P47988 759 aa7.41□□□□□ -1.22
SIR1YKR101W GYP5Q12344 894 aa7.41□□□□□ -1.22
SIR1YKR101W RGR1P19263 1082 aa7.4□□□□□ -1.23
SIR1YKR101W GEF1P37020 779 aa7.4□□□□□ -1.23
SIR1YKR101W NOP8Q08287 484 aaPredicted RBP7.4□□□□□ -1.23
SIR1YKR101W ERG12P07277 443 aa7.39□□□□□ -1.23
SIR1YKR101W TIF1P10081 395 aaKnown RBP7.38□□□□□ -1.23
SIR1YKR101W ILV3P39522 585 aaKnown RBP7.38□□□□□ -1.23
SIR1YKR101W SLX8P40072 274 aa7.37□□□□□ -1.23
SIR1YKR101W BIO2P32451 375 aa7.35□□□□□ -1.23
SIR1YKR101W DCW1P36091 449 aa7.35□□□□□ -1.23
SIR1YKR101W MVP1P40959 511 aaKnown RBP7.35□□□□□ -1.23
SIR1YKR101W NIS1P53939 407 aa7.35□□□□□ -1.23
SIR1YKR101W MST1P07236 462 aa7.33□□□□□ -1.24
SIR1YKR101W GAP1P19145 602 aaPredicted RBP7.33□□□□□ -1.24
SIR1YKR101W FPK1P53739 893 aa7.32□□□□□ -1.24
SIR1YKR101W CPS1P27614 576 aa7.31□□□□□ -1.24
SIR1YKR101W YBL036CP38197 257 aa7.31□□□□□ -1.24
SIR1YKR101W YOL036WQ08206 761 aa7.31□□□□□ -1.24
SIR1YKR101W MPH3P0CE00 602 aa7.31□□□□□ -1.24
SIR1YKR101W SSA4P22202 642 aaKnown RBP7.31□□□□□ -1.24
SIR1YKR101W SCJ1P25303 377 aa7.31□□□□□ -1.24
SIR1YKR101W AI4P03878 556 aa7.3□□□□□ -1.24
SIR1YKR101W HST2P53686 357 aa7.3□□□□□ -1.24
SIR1YKR101W RPL34BP40525 121 aaKnown RBP7.29□□□□□ -1.24
SIR1YKR101W SET4P42948 560 aa7.29□□□□□ -1.24
SIR1YKR101W ESS1P22696 170 aa7.28□□□□□ -1.24
SIR1YKR101W CLB5P30283 435 aa7.28□□□□□ -1.24
SIR1YKR101W TTI1P36097 1038 aa7.28□□□□□ -1.24
SIR1YKR101W SLI15P38283 698 aa7.28□□□□□ -1.24
SIR1YKR101W YPR204WQ08995 1032 aa7.28□□□□□ -1.24
SIR1YKR101W RAD59Q12223 238 aa7.28□□□□□ -1.24
SIR1YKR101W RTG2P32608 588 aaKnown RBP7.28□□□□□ -1.24
SIR1YKR101W YNL108CP53929 270 aa7.28□□□□□ -1.24
SIR1YKR101W NOB1Q08444 459 aaKnown RBP7.28□□□□□ -1.24
SIR1YKR101W YJU3P28321 313 aa7.27□□□□□ -1.25
SIR1YKR101W PKH3Q03306 898 aaPredicted RBP7.27□□□□□ -1.25
SIR1YKR101W HTA1P04911 132 aaKnown RBP7.26□□□□□ -1.25
SIR1YKR101W HTA2P04912 132 aa7.26□□□□□ -1.25
SIR1YKR101W YPR109WQ06104 294 aa7.26□□□□□ -1.25
SIR1YKR101W GTT3P39996 337 aa7.26□□□□□ -1.25
SIR1YKR101W MMP1Q12372 583 aa7.26□□□□□ -1.25
SIR1YKR101W YMR196WQ04336 1088 aa7.24□□□□□ -1.25
SIR1YKR101W DAN4P47179 1161 aa7.24□□□□□ -1.25
SIR1YKR101W CSC1Q06538 782 aa7.24□□□□□ -1.25
SIR1YKR101W CDC73Q06697 393 aa7.24□□□□□ -1.25
SIR1YKR101W SUP45P12385 437 aaKnown RBP7.23□□□□□ -1.25
SIR1YKR101W SIT4P20604 311 aa7.22□□□□□ -1.25
SIR1YKR101W CSE4P36012 229 aa7.22□□□□□ -1.25
SIR1YKR101W YEL023CP39992 682 aa7.21□□□□□ -1.26
SIR1YKR101W YDJ1P25491 409 aaKnown RBP7.2□□□□□ -1.26
SIR1YKR101W YML083CQ04526 418 aa7.2□□□□□ -1.26
SIR1YKR101W ENO2P00925 437 aaKnown RBP7.19□□□□□ -1.26
SIR1YKR101W RSC30P38781 883 aa7.19□□□□□ -1.26
SIR1YKR101W ENO1P00924 437 aaKnown RBP7.19□□□□□ -1.26
SIR1YKR101W ARG8P18544 423 aa7.19□□□□□ -1.26
SIR1YKR101W PUP1P25043 261 aa7.19□□□□□ -1.26
SIR1YKR101W MRX12P47084 519 aa7.17□□□□□ -1.26
SIR1YKR101W MRX10Q05648 414 aa7.17□□□□□ -1.26
SIR1YKR101W TFB4Q12004 338 aa7.17□□□□□ -1.26
SIR1YKR101W RPL34AP87262 121 aaPredicted RBP7.17□□□□□ -1.26
SIR1YKR101W TUM1Q08686 304 aaKnown RBP7.17□□□□□ -1.26
SIR1YKR101W MSB4Q12317 492 aa7.16□□□□□ -1.26
SIR1YKR101W RIM21P48565 533 aa7.15□□□□□ -1.27
SIR1YKR101W RPP1BP10622 106 aaKnown RBP7.13□□□□□ -1.27
SIR1YKR101W MAK16P10962 306 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms