RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeastyeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN3YKL125W XRN1P22147 1528 aaKnown RBP6.61□□□□□ -1.35
RRN3YKL125W SPT2P06843 333 aaPredicted RBP6.6□□□□□ -1.35
RRN3YKL125W RNA1P11745 407 aaKnown RBP6.6□□□□□ -1.35
RRN3YKL125W SPB4P25808 606 aaPredicted RBP6.6□□□□□ -1.35
RRN3YKL125W VPS70P47161 811 aa6.6□□□□□ -1.35
RRN3YKL125W SPP41P38904 1435 aa6.6□□□□□ -1.35
RRN3YKL125W MON2P48563 1636 aaPredicted RBP6.59□□□□□ -1.35
RRN3YKL125W SPC110P32380 944 aa6.59□□□□□ -1.35
RRN3YKL125W RCR1P38212 213 aa6.59□□□□□ -1.35
RRN3YKL125W EAF7P53911 425 aaKnown RBP6.59□□□□□ -1.35
RRN3YKL125W DMA2P53924 522 aa6.59□□□□□ -1.35
RRN3YKL125W SNF7P39929 240 aaKnown RBP6.58□□□□□ -1.36
RRN3YKL125W YTA7P40340 1379 aa6.57□□□□□ -1.36
RRN3YKL125W NAP1P25293 417 aaKnown RBP6.57□□□□□ -1.36
RRN3YKL125W BDF1P35817 686 aa6.57□□□□□ -1.36
RRN3YKL125W RIX1P38883 763 aaPredicted RBP6.56□□□□□ -1.36
RRN3YKL125W RPC31P17890 251 aa6.56□□□□□ -1.36
RRN3YKL125W RTG3P38165 486 aa6.56□□□□□ -1.36
RRN3YKL125W MAK11P20484 414 aaKnown RBP6.55□□□□□ -1.36
RRN3YKL125W PAF1P38351 445 aa6.55□□□□□ -1.36
RRN3YKL125W BUD31P25337 157 aaPredicted RBP6.54□□□□□ -1.36
RRN3YKL125W NMD2P38798 1089 aaKnown RBP6.53□□□□□ -1.36
RRN3YKL125W TRM732Q03496 1420 aa6.52□□□□□ -1.37
RRN3YKL125W FUN12P39730 1002 aaKnown RBP6.52□□□□□ -1.37
RRN3YKL125W PLP2Q12017 286 aa6.52□□□□□ -1.37
RRN3YKL125W INO80P53115 1489 aa6.52□□□□□ -1.37
RRN3YKL125W HSP82P02829 709 aaKnown RBP6.51□□□□□ -1.37
RRN3YKL125W DSF2P38213 736 aa6.51□□□□□ -1.37
RRN3YKL125W VPS4P52917 437 aa6.51□□□□□ -1.37
RRN3YKL125W RAD26P40352 1085 aa6.5□□□□□ -1.37
RRN3YKL125W CTR9P89105 1077 aa6.5□□□□□ -1.37
RRN3YKL125W PEP1P32319 1579 aa6.5□□□□□ -1.37
RRN3YKL125W ROX1P25042 368 aa6.49□□□□□ -1.37
RRN3YKL125W YNL011CP53980 444 aa6.49□□□□□ -1.37
RRN3YKL125W SCY1P53009 804 aa6.49□□□□□ -1.37
RRN3YKL125W RLP24Q07915 199 aaKnown RBP6.49□□□□□ -1.37
RRN3YKL125W IKI3Q06706 1349 aaKnown RBP6.48□□□□□ -1.37
RRN3YKL125W SWE1P32944 819 aa6.48□□□□□ -1.37
RRN3YKL125W TOP2P06786 1428 aaKnown RBP6.48□□□□□ -1.37
RRN3YKL125W SRB8P25648 1427 aa6.47□□□□□ -1.37
RRN3YKL125W PBS2P08018 668 aa6.47□□□□□ -1.37
RRN3YKL125W SIC1P38634 284 aa6.47□□□□□ -1.37
RRN3YKL125W PIL1P53252 339 aaKnown RBP6.47□□□□□ -1.37
RRN3YKL125W GRX3Q03835 250 aa6.47□□□□□ -1.37
RRN3YKL125W SLN1P39928 1220 aaPredicted RBP6.46□□□□□ -1.38
RRN3YKL125W NOP58Q12499 511 aaKnown RBP6.46□□□□□ -1.38
RRN3YKL125W BUD4P47136 1447 aa6.46□□□□□ -1.38
RRN3YKL125W VPS29P38759 282 aa6.45□□□□□ -1.38
RRN3YKL125W ETT1Q08421 412 aaKnown RBP6.45□□□□□ -1.38
RRN3YKL125W COQ8P27697 501 aa6.45□□□□□ -1.38
RRN3YKL125W YNR021WP53723 404 aaKnown RBP6.44□□□□□ -1.38
RRN3YKL125W UBP10P53874 792 aaPredicted RBP6.44□□□□□ -1.38
RRN3YKL125W MSH3P25336 1018 aa6.43□□□□□ -1.38
RRN3YKL125W SMC3P47037 1230 aa6.43□□□□□ -1.38
RRN3YKL125W MMS1Q06211 1407 aa6.43□□□□□ -1.38
RRN3YKL125W ABP1P15891 592 aaKnown RBP6.43□□□□□ -1.38
RRN3YKL125W TIF4632P39936 914 aaKnown RBP6.43□□□□□ -1.38
RRN3YKL125W SSM4P40318 1319 aa6.42□□□□□ -1.38
RRN3YKL125W YLR419WQ06698 1435 aaKnown RBP6.42□□□□□ -1.38
RRN3YKL125W PDR10P51533 1564 aa6.41□□□□□ -1.38
RRN3YKL125W BYE1P36106 594 aa6.41□□□□□ -1.38
RRN3YKL125W MAP2P38174 421 aaKnown RBP6.41□□□□□ -1.38
RRN3YKL125W MSH4P40965 878 aaPredicted RBP6.41□□□□□ -1.38
RRN3YKL125W YPP1P46951 817 aa6.41□□□□□ -1.38
RRN3YKL125W KIN1P13185 1064 aa6.4□□□□□ -1.39
RRN3YKL125W YIR014WP40570 242 aa6.4□□□□□ -1.39
RRN3YKL125W DOS2P54858 310 aa6.4□□□□□ -1.39
RRN3YKL125W BMS1Q08965 1183 aaKnown RBP6.39□□□□□ -1.39
RRN3YKL125W RTT106P40161 455 aa6.39□□□□□ -1.39
RRN3YKL125W DJP1P40564 432 aa6.39□□□□□ -1.39
RRN3YKL125W PRP3Q03338 469 aaPredicted RBP6.39□□□□□ -1.39
RRN3YKL125W CLB5P30283 435 aa6.38□□□□□ -1.39
RRN3YKL125W NNF2P53253 936 aa6.38□□□□□ -1.39
RRN3YKL125W ECM16Q04217 1267 aaKnown RBP6.38□□□□□ -1.39
RRN3YKL125W MAM3Q12296 706 aa6.38□□□□□ -1.39
RRN3YKL125W REF2P42073 533 aaPredicted RBP6.37□□□□□ -1.39
RRN3YKL125W YMR1P47147 688 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
RRN3YKL125W AIM7Q12156 149 aa6.37□□□□□ -1.39
RRN3YKL125W MYO4P32492 1471 aa6.37□□□□□ -1.39
RRN3YKL125W NOT3P06102 836 aaKnown RBP6.36□□□□□ -1.39
RRN3YKL125W SNU71P53207 620 aaKnown RBP6.36□□□□□ -1.39
RRN3YKL125W EDS1P38073 919 aa6.36□□□□□ -1.39
RRN3YKL125W MED8P38304 223 aa6.36□□□□□ -1.39
RRN3YKL125W YPK9Q12697 1472 aa6.35□□□□□ -1.39
RRN3YKL125W GLC3P32775 704 aa6.35□□□□□ -1.39
RRN3YKL125W MIF2P35201 549 aa6.35□□□□□ -1.39
RRN3YKL125W IES2P40154 320 aa6.35□□□□□ -1.39
RRN3YKL125W DSN1P40568 576 aa6.35□□□□□ -1.39
RRN3YKL125W SPT6P23615 1451 aaKnown RBP6.35□□□□□ -1.39
RRN3YKL125W KNS1P32350 737 aaPredicted RBP6.34□□□□□ -1.39
RRN3YKL125W SLX5P32828 619 aaKnown RBP6.34□□□□□ -1.39
RRN3YKL125W STS1P38637 319 aa6.34□□□□□ -1.39
RRN3YKL125W MDG1P53885 366 aa6.34□□□□□ -1.39
RRN3YKL125W RPN7Q06103 429 aaKnown RBP6.34□□□□□ -1.39
RRN3YKL125W LTV1P34078 463 aa6.34□□□□□ -1.39
RRN3YKL125W EDE1P34216 1381 aa6.34□□□□□ -1.39
RRN3YKL125W NUP42P49686 430 aaKnown RBP6.33□□□□□ -1.4
RRN3YKL125W NOP8Q08287 484 aaPredicted RBP6.33□□□□□ -1.4
RRN3YKL125W NUP170P38181 1502 aa6.33□□□□□ -1.4
RRN3YKL125W ECM1P39715 212 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms