RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C VPS4P52917 437 aa4.86□□□□□ -1.63
SPT23YKL020C BUD4P47136 1447 aa4.85□□□□□ -1.63
SPT23YKL020C MYO2P19524 1574 aaKnown RBP4.85□□□□□ -1.63
SPT23YKL020C RNA1P11745 407 aaKnown RBP4.85□□□□□ -1.63
SPT23YKL020C NMD2P38798 1089 aaKnown RBP4.85□□□□□ -1.63
SPT23YKL020C SWE1P32944 819 aa4.84□□□□□ -1.63
SPT23YKL020C SSA1P10591 642 aaKnown RBP4.83□□□□□ -1.64
SPT23YKL020C SSA2P10592 639 aaKnown RBP4.83□□□□□ -1.64
SPT23YKL020C EAF7P53911 425 aaKnown RBP4.83□□□□□ -1.64
SPT23YKL020C SUB1P54000 292 aaKnown RBP4.83□□□□□ -1.64
SPT23YKL020C GRX3Q03835 250 aa4.83□□□□□ -1.64
SPT23YKL020C SNF7P39929 240 aaKnown RBP4.83□□□□□ -1.64
SPT23YKL020C VPS72Q03388 795 aa4.82□□□□□ -1.64
SPT23YKL020C IRC20Q06554 1556 aa4.82□□□□□ -1.64
SPT23YKL020C SSM4P40318 1319 aa4.82□□□□□ -1.64
SPT23YKL020C MTC1P47018 478 aaKnown RBP4.82□□□□□ -1.64
SPT23YKL020C MYO4P32492 1471 aa4.82□□□□□ -1.64
SPT23YKL020C STU1P38198 1513 aa4.82□□□□□ -1.64
SPT23YKL020C MPP10P47083 593 aaKnown RBP4.82□□□□□ -1.64
SPT23YKL020C YPK9Q12697 1472 aa4.8□□□□□ -1.64
SPT23YKL020C MMS1Q06211 1407 aa4.8□□□□□ -1.64
SPT23YKL020C SSK2P53599 1579 aa4.8□□□□□ -1.64
SPT23YKL020C BRN1P38170 754 aa4.8□□□□□ -1.64
SPT23YKL020C RPC31P17890 251 aa4.79□□□□□ -1.64
SPT23YKL020C PAF1P38351 445 aa4.79□□□□□ -1.64
SPT23YKL020C HIR3P47171 1648 aa4.78□□□□□ -1.64
SPT23YKL020C YSH1Q06224 779 aaPredicted RBP4.78□□□□□ -1.64
SPT23YKL020C ETT1Q08421 412 aaKnown RBP4.78□□□□□ -1.64
SPT23YKL020C SPT6P23615 1451 aaKnown RBP4.77□□□□□ -1.65
SPT23YKL020C ROX1P25042 368 aa4.76□□□□□ -1.65
SPT23YKL020C PEA2P40091 420 aa4.76□□□□□ -1.65
SPT23YKL020C YIR014WP40570 242 aa4.76□□□□□ -1.65
SPT23YKL020C DMA2P53924 522 aa4.76□□□□□ -1.65
SPT23YKL020C NNF2P53253 936 aa4.75□□□□□ -1.65
SPT23YKL020C TPO2P53283 614 aa4.75□□□□□ -1.65
SPT23YKL020C ASF1P32447 279 aa4.75□□□□□ -1.65
SPT23YKL020C YMR196WQ04336 1088 aa4.75□□□□□ -1.65
SPT23YKL020C NST1P53935 1240 aa4.74□□□□□ -1.65
SPT23YKL020C PET111P08468 800 aa4.74□□□□□ -1.65
SPT23YKL020C SCC2Q04002 1493 aa4.74□□□□□ -1.65
SPT23YKL020C CDC11P32458 415 aa4.74□□□□□ -1.65
SPT23YKL020C ESP1Q03018 1630 aa4.73□□□□□ -1.65
SPT23YKL020C DNA2P38859 1522 aa4.73□□□□□ -1.65
SPT23YKL020C SMC4Q12267 1418 aa4.73□□□□□ -1.65
SPT23YKL020C EDE1P34216 1381 aa4.73□□□□□ -1.65
SPT23YKL020C BYE1P36106 594 aa4.73□□□□□ -1.65
SPT23YKL020C SLN1P39928 1220 aaPredicted RBP4.73□□□□□ -1.65
SPT23YKL020C SAP190P36123 1033 aa4.73□□□□□ -1.65
SPT23YKL020C APL5Q08951 932 aaKnown RBP4.73□□□□□ -1.65
SPT23YKL020C ISW1P38144 1129 aa4.72□□□□□ -1.65
SPT23YKL020C CTR9P89105 1077 aa4.72□□□□□ -1.65
SPT23YKL020C BPT1P14772 1559 aa4.72□□□□□ -1.65
SPT23YKL020C MSH4P40965 878 aaPredicted RBP4.72□□□□□ -1.65
SPT23YKL020C ATG36P46983 293 aa4.72□□□□□ -1.65
SPT23YKL020C REV3P14284 1504 aa4.72□□□□□ -1.65
SPT23YKL020C SWR1Q05471 1514 aa4.72□□□□□ -1.65
SPT23YKL020C SIC1P38634 284 aa4.72□□□□□ -1.65
SPT23YKL020C RTS3P53289 263 aa4.72□□□□□ -1.65
SPT23YKL020C GCN2P15442 1659 aa4.72□□□□□ -1.65
SPT23YKL020C POL1P13382 1468 aa4.71□□□□□ -1.66
SPT23YKL020C TAN1P53072 289 aaPredicted RBP4.71□□□□□ -1.66
SPT23YKL020C NOP58Q12499 511 aaKnown RBP4.71□□□□□ -1.66
SPT23YKL020C MCM1P11746 286 aa4.71□□□□□ -1.66
SPT23YKL020C ABP1P15891 592 aaKnown RBP4.71□□□□□ -1.66
SPT23YKL020C RTT106P40161 455 aa4.71□□□□□ -1.66
SPT23YKL020C HOS4P40480 1083 aa4.71□□□□□ -1.66
SPT23YKL020C KIP3P53086 805 aaKnown RBP4.71□□□□□ -1.66
SPT23YKL020C HSC82P15108 705 aaKnown RBP4.7□□□□□ -1.66
SPT23YKL020C TAF2P23255 1407 aa4.7□□□□□ -1.66
SPT23YKL020C SMC3P47037 1230 aa4.7□□□□□ -1.66
SPT23YKL020C NOT3P06102 836 aaKnown RBP4.69□□□□□ -1.66
SPT23YKL020C DAL5P15365 543 aa4.69□□□□□ -1.66
SPT23YKL020C MSH3P25336 1018 aa4.69□□□□□ -1.66
SPT23YKL020C RAD26P40352 1085 aa4.69□□□□□ -1.66
SPT23YKL020C ECM16Q04217 1267 aaKnown RBP4.69□□□□□ -1.66
SPT23YKL020C NOP8Q08287 484 aaPredicted RBP4.69□□□□□ -1.66
SPT23YKL020C TAF13P11747 167 aa4.69□□□□□ -1.66
SPT23YKL020C LTV1P34078 463 aa4.69□□□□□ -1.66
SPT23YKL020C CFT2Q12102 859 aaPredicted RBP4.69□□□□□ -1.66
SPT23YKL020C YCF1P39109 1515 aaKnown RBP4.69□□□□□ -1.66
SPT23YKL020C PSD2P53037 1138 aaKnown RBP4.68□□□□□ -1.66
SPT23YKL020C RPN7Q06103 429 aaKnown RBP4.68□□□□□ -1.66
SPT23YKL020C BUD21Q08492 214 aaPredicted RBP4.68□□□□□ -1.66
SPT23YKL020C NAB3P38996 802 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
SPT23YKL020C PAN1P32521 1480 aa4.68□□□□□ -1.66
SPT23YKL020C TY1B-AO13527 1196 aaKnown RBP4.68□□□□□ -1.66
SPT23YKL020C LEU3P08638 886 aa4.68□□□□□ -1.66
SPT23YKL020C LEM3P42838 414 aa4.68□□□□□ -1.66
SPT23YKL020C OSW7P43611 510 aa4.68□□□□□ -1.66
SPT23YKL020C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
SPT23YKL020C DOS2P54858 310 aa4.68□□□□□ -1.66
SPT23YKL020C LAM6Q08001 693 aa4.68□□□□□ -1.66
SPT23YKL020C RRP14P36080 434 aaKnown RBP4.67□□□□□ -1.66
SPT23YKL020C SEC9P40357 651 aa4.67□□□□□ -1.66
SPT23YKL020C MTR4P47047 1073 aaKnown RBP4.67□□□□□ -1.66
SPT23YKL020C CBF5P33322 483 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
SPT23YKL020C RSC8P43609 557 aaKnown RBP4.67□□□□□ -1.66
SPT23YKL020C YLL054CQ12244 843 aa4.67□□□□□ -1.66
SPT23YKL020C AIM21P40563 679 aa4.67□□□□□ -1.66
SPT23YKL020C ESC1Q03661 1658 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms