RNA–Protein interactions for RNA: YJL052W

TDH1, Transcript of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1, yeastyeast

Gene TDH1, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDH1YJL052W TY1B-ER2Q03619 1755 aa12.52□□□□□ -0.41
TDH1YJL052W TY1B-MR1Q04214 1755 aa12.52□□□□□ -0.41
TDH1YJL052W TY1B-MR2Q04670 1755 aaKnown RBP12.52□□□□□ -0.41
TDH1YJL052W TY1B-LR1Q12088 1755 aaKnown RBP12.52□□□□□ -0.41
TDH1YJL052W TY1B-NL1Q12112 1755 aa12.52□□□□□ -0.41
TDH1YJL052W TY1B-GR1Q12141 1755 aa12.52□□□□□ -0.41
TDH1YJL052W TY1B-BLQ12490 1755 aa12.52□□□□□ -0.41
TDH1YJL052W VTH1P40438 1549 aa12.51□□□□□ -0.41
TDH1YJL052W VTH2P40890 1549 aa12.51□□□□□ -0.41
TDH1YJL052W TSC11P40061 1430 aa12.5□□□□□ -0.41
TDH1YJL052W NTE1Q04958 1679 aa12.5□□□□□ -0.41
TDH1YJL052W YTA7P40340 1379 aa12.49□□□□□ -0.41
TDH1YJL052W MYO4P32492 1471 aa12.47□□□□□ -0.41
TDH1YJL052W NUP159P40477 1460 aa12.47□□□□□ -0.41
TDH1YJL052W GEA2P39993 1459 aaKnown RBP12.46□□□□□ -0.41
TDH1YJL052W MRPL32P25348 183 aa12.45□□□□□ -0.42
TDH1YJL052W YRF1-1P0CX20 1796 aa12.45□□□□□ -0.42
TDH1YJL052W YRF1-5P0CX21 1796 aa12.45□□□□□ -0.42
TDH1YJL052W YRF1-8P0CX22 1796 aa12.45□□□□□ -0.42
TDH1YJL052W RPO21P04050 1733 aaKnown RBP12.44□□□□□ -0.42
TDH1YJL052W HAA1Q12753 694 aaKnown RBP12.39□□□□□ -0.43
TDH1YJL052W VPS15P22219 1454 aa12.39□□□□□ -0.43
TDH1YJL052W BNI1P41832 1953 aa12.38□□□□□ -0.43
TDH1YJL052W YCK3P39962 524 aa12.37□□□□□ -0.43
TDH1YJL052W SNQ2P32568 1501 aaKnown RBP12.35□□□□□ -0.43
TDH1YJL052W RIM101P33400 625 aa12.34□□□□□ -0.43
TDH1YJL052W STH1P32597 1359 aa12.31□□□□□ -0.44
TDH1YJL052W ITT1Q04638 464 aa12.3□□□□□ -0.44
TDH1YJL052W DRS2P39524 1355 aa12.28□□□□□ -0.44
TDH1YJL052W SNT2P53127 1403 aa12.27□□□□□ -0.45
TDH1YJL052W MLP2P40457 1679 aa12.22□□□□□ -0.45
TDH1YJL052W MMS1Q06211 1407 aa12.2□□□□□ -0.46
TDH1YJL052W MET10P39692 1035 aa12.19□□□□□ -0.46
TDH1YJL052W RTT106P40161 455 aa12.19□□□□□ -0.46
TDH1YJL052W NUP170P38181 1502 aa12.18□□□□□ -0.46
TDH1YJL052W SPO14P36126 1683 aa12.18□□□□□ -0.46
TDH1YJL052W ULS1Q08562 1619 aa12.18□□□□□ -0.46
TDH1YJL052W YKR023WP36119 530 aaKnown RBP12.17□□□□□ -0.46
TDH1YJL052W PDR12Q02785 1511 aa12.16□□□□□ -0.46
TDH1YJL052W MIF2P35201 549 aa12.15□□□□□ -0.46
TDH1YJL052W PDR15Q04182 1529 aaKnown RBP12.13□□□□□ -0.47
TDH1YJL052W SAS10Q12136 610 aaPredicted RBP12.12□□□□□ -0.47
TDH1YJL052W ABP1P15891 592 aaKnown RBP12.1□□□□□ -0.47
TDH1YJL052W GDB1Q06625 1536 aa12.09□□□□□ -0.47
TDH1YJL052W TAF7Q05021 590 aa12.08□□□□□ -0.48
TDH1YJL052W IRC20Q06554 1556 aa12.07□□□□□ -0.48
TDH1YJL052W DNF2Q12675 1612 aa12.05□□□□□ -0.48
TDH1YJL052W IQG1Q12280 1495 aa12.03□□□□□ -0.48
TDH1YJL052W DOP1Q03921 1698 aa12.03□□□□□ -0.48
TDH1YJL052W NUP157P40064 1391 aaKnown RBP12.03□□□□□ -0.48
TDH1YJL052W BUD3P25558 1636 aa12□□□□□ -0.49
TDH1YJL052W TRM3Q07527 1436 aa12□□□□□ -0.49
TDH1YJL052W PDR10P51533 1564 aa12□□□□□ -0.49
TDH1YJL052W CDC27P38042 758 aa11.97□□□□□ -0.49
TDH1YJL052W IFH1P39520 1085 aa11.96□□□□□ -0.49
TDH1YJL052W HOP09932 586 aa11.94□□□□□ -0.5
TDH1YJL052W OXP1P28273 1286 aa11.94□□□□□ -0.5
TDH1YJL052W TFC8Q12308 588 aa11.94□□□□□ -0.5
TDH1YJL052W GEA1P47102 1408 aaPredicted RBP11.92□□□□□ -0.5
TDH1YJL052W CAT8P39113 1433 aa11.9□□□□□ -0.5
TDH1YJL052W YBT1P32386 1661 aa11.88□□□□□ -0.51
TDH1YJL052W CHC1P22137 1653 aaKnown RBP11.87□□□□□ -0.51
TDH1YJL052W TY3B-GQ99315 1547 aa11.86□□□□□ -0.51
TDH1YJL052W DCD1P06773 312 aa11.84□□□□□ -0.51
TDH1YJL052W ARO1P08566 1588 aaKnown RBP11.83□□□□□ -0.52
TDH1YJL052W YIL055CP40523 627 aaKnown RBP11.82□□□□□ -0.52
TDH1YJL052W PTP3P40048 928 aa11.81□□□□□ -0.52
TDH1YJL052W SEC7P11075 2009 aaKnown RBP11.78□□□□□ -0.52
TDH1YJL052W YFR006WP43590 535 aa11.76□□□□□ -0.53
TDH1YJL052W YAH1Q12184 172 aaKnown RBP11.76□□□□□ -0.53
TDH1YJL052W YOR093CQ12275 1648 aa11.75□□□□□ -0.53
TDH1YJL052W CKB1P43639 278 aa11.74□□□□□ -0.53
TDH1YJL052W YSP2Q06681 1438 aa11.72□□□□□ -0.53
TDH1YJL052W SSP1P38871 571 aa11.72□□□□□ -0.53
TDH1YJL052W BNR1P40450 1375 aa11.7□□□□□ -0.54
TDH1YJL052W DNF3Q12674 1656 aa11.65□□□□□ -0.54
TDH1YJL052W YGL015CP33199 130 aa11.65□□□□□ -0.54
TDH1YJL052W SRB8P25648 1427 aa11.62□□□□□ -0.55
TDH1YJL052W RSM7P47150 247 aa11.62□□□□□ -0.55
TDH1YJL052W YAP3P38749 330 aa11.6□□□□□ -0.55
TDH1YJL052W BCH2P36122 765 aa11.59□□□□□ -0.55
TDH1YJL052W YLR271WQ06152 274 aa11.59□□□□□ -0.55
TDH1YJL052W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
TDH1YJL052W URN1Q06525 465 aaKnown RBP11.55□□□□□ -0.56
TDH1YJL052W UBP10P53874 792 aaPredicted RBP11.52□□□□□ -0.57
TDH1YJL052W BUD21Q08492 214 aaPredicted RBP11.5□□□□□ -0.57
TDH1YJL052W MAP2P38174 421 aaKnown RBP11.48□□□□□ -0.57
TDH1YJL052W NUP188P52593 1655 aaKnown RBP11.46□□□□□ -0.58
TDH1YJL052W IKI3Q06706 1349 aaKnown RBP11.45□□□□□ -0.58
TDH1YJL052W SCY1P53009 804 aa11.45□□□□□ -0.58
TDH1YJL052W MAK10Q02197 733 aa11.45□□□□□ -0.58
TDH1YJL052W AI2P03876 854 aa11.43□□□□□ -0.58
TDH1YJL052W HAP1P0CE41 1502 aa11.4□□□□□ -0.59
TDH1YJL052W IPL1P38991 367 aa11.39□□□□□ -0.59
TDH1YJL052W BBC1P47068 1157 aa11.39□□□□□ -0.59
TDH1YJL052W USO1P25386 1790 aa11.39□□□□□ -0.59
TDH1YJL052W VMR1P38735 1592 aa11.38□□□□□ -0.59
TDH1YJL052W IML1P47170 1584 aa11.38□□□□□ -0.59
TDH1YJL052W EPS1P40557 701 aa11.38□□□□□ -0.59
TDH1YJL052W MGA2P40578 1113 aa11.34□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms