RNA–Protein interactions for RNA: YIL022W

TIM44, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM44, Length 1,296 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM44YIL022W TY1B-ER2Q03619 1755 aa14.49□□□□□ -0.09
TIM44YIL022W TY1B-MR1Q04214 1755 aa14.49□□□□□ -0.09
TIM44YIL022W TY1B-MR2Q04670 1755 aaKnown RBP14.49□□□□□ -0.09
TIM44YIL022W TY1B-LR1Q12088 1755 aaKnown RBP14.49□□□□□ -0.09
TIM44YIL022W TY1B-NL1Q12112 1755 aa14.49□□□□□ -0.09
TIM44YIL022W TY1B-GR1Q12141 1755 aa14.49□□□□□ -0.09
TIM44YIL022W TY1B-BLQ12490 1755 aa14.49□□□□□ -0.09
TIM44YIL022W YOR1P53049 1477 aa14.49□□□□□ -0.09
TIM44YIL022W NUP170P38181 1502 aa14.48□□□□□ -0.09
TIM44YIL022W VTH1P40438 1549 aa14.47□□□□□ -0.09
TIM44YIL022W VTH2P40890 1549 aa14.47□□□□□ -0.09
TIM44YIL022W RPO21P04050 1733 aaKnown RBP14.46□□□□□ -0.09
TIM44YIL022W STU1P38198 1513 aa14.41□□□□□ -0.1
TIM44YIL022W YOR093CQ12275 1648 aa14.4□□□□□ -0.1
TIM44YIL022W MYO4P32492 1471 aa14.35□□□□□ -0.11
TIM44YIL022W SNT2P53127 1403 aa14.34□□□□□ -0.11
TIM44YIL022W SPO14P36126 1683 aa14.32□□□□□ -0.12
TIM44YIL022W MET10P39692 1035 aa14.29□□□□□ -0.12
TIM44YIL022W ULS1Q08562 1619 aa14.29□□□□□ -0.12
TIM44YIL022W DOP1Q03921 1698 aa14.23□□□□□ -0.13
TIM44YIL022W SNQ2P32568 1501 aaKnown RBP14.21□□□□□ -0.13
TIM44YIL022W TRM3Q07527 1436 aa14.21□□□□□ -0.13
TIM44YIL022W RTT106P40161 455 aa14.13□□□□□ -0.15
TIM44YIL022W PDR10P51533 1564 aa14.13□□□□□ -0.15
TIM44YIL022W STH1P32597 1359 aa14.12□□□□□ -0.15
TIM44YIL022W PDR12Q02785 1511 aa14.11□□□□□ -0.15
TIM44YIL022W IQG1Q12280 1495 aa14.11□□□□□ -0.15
TIM44YIL022W GDB1Q06625 1536 aa14.03□□□□□ -0.16
TIM44YIL022W YTA7P40340 1379 aa14.01□□□□□ -0.17
TIM44YIL022W BUD3P25558 1636 aa14.01□□□□□ -0.17
TIM44YIL022W NUP157P40064 1391 aaKnown RBP13.99□□□□□ -0.17
TIM44YIL022W PDR15Q04182 1529 aaKnown RBP13.98□□□□□ -0.17
TIM44YIL022W MLP2P40457 1679 aa13.92□□□□□ -0.18
TIM44YIL022W DNF3Q12674 1656 aa13.91□□□□□ -0.18
TIM44YIL022W CHC1P22137 1653 aaKnown RBP13.87□□□□□ -0.19
TIM44YIL022W ARO1P08566 1588 aaKnown RBP13.87□□□□□ -0.19
TIM44YIL022W YAP3P38749 330 aa13.77□□□□□ -0.21
TIM44YIL022W MAK10Q02197 733 aa13.72□□□□□ -0.21
TIM44YIL022W BNR1P40450 1375 aa13.7□□□□□ -0.22
TIM44YIL022W TY3B-GQ99315 1547 aa13.69□□□□□ -0.22
TIM44YIL022W URN1Q06525 465 aaKnown RBP13.57□□□□□ -0.24
TIM44YIL022W SEC7P11075 2009 aaKnown RBP13.57□□□□□ -0.24
TIM44YIL022W USO1P25386 1790 aa13.55□□□□□ -0.24
TIM44YIL022W YSP2Q06681 1438 aa13.54□□□□□ -0.24
TIM44YIL022W TAF7Q05021 590 aa13.51□□□□□ -0.25
TIM44YIL022W CAT8P39113 1433 aa13.5□□□□□ -0.25
TIM44YIL022W SAS10Q12136 610 aaPredicted RBP13.5□□□□□ -0.25
TIM44YIL022W IFH1P39520 1085 aa13.49□□□□□ -0.25
TIM44YIL022W YMR196WQ04336 1088 aa13.47□□□□□ -0.25
TIM44YIL022W CKB1P43639 278 aa13.45□□□□□ -0.26
TIM44YIL022W THI12P42883 340 aa13.43□□□□□ -0.26
TIM44YIL022W THI5P43534 340 aa13.43□□□□□ -0.26
TIM44YIL022W THI11P47183 340 aa13.43□□□□□ -0.26
TIM44YIL022W THI13Q07748 340 aa13.43□□□□□ -0.26
TIM44YIL022W TY1B-NL2Q99337 1749 aaKnown RBP13.36□□□□□ -0.27
TIM44YIL022W YBT1P32386 1661 aa13.34□□□□□ -0.27
TIM44YIL022W GLN1P32288 370 aaKnown RBP13.32□□□□□ -0.28
TIM44YIL022W GEA1P47102 1408 aaPredicted RBP13.3□□□□□ -0.28
TIM44YIL022W IML1P47170 1584 aa13.28□□□□□ -0.28
TIM44YIL022W HAP1P0CE41 1502 aa13.28□□□□□ -0.28
TIM44YIL022W YAH1Q12184 172 aaKnown RBP13.26□□□□□ -0.29
TIM44YIL022W IPL1P38991 367 aa13.25□□□□□ -0.29
TIM44YIL022W NUP188P52593 1655 aaKnown RBP13.24□□□□□ -0.29
TIM44YIL022W VMR1P38735 1592 aa13.19□□□□□ -0.3
TIM44YIL022W YIL055CP40523 627 aaKnown RBP13.16□□□□□ -0.3
TIM44YIL022W PRI1P10363 409 aa13.13□□□□□ -0.31
TIM44YIL022W FAP1P53971 965 aa13.13□□□□□ -0.31
TIM44YIL022W TYS1P36421 394 aaKnown RBP13.12□□□□□ -0.31
TIM44YIL022W SRB8P25648 1427 aa13.09□□□□□ -0.31
TIM44YIL022W APP1P53933 587 aa13.09□□□□□ -0.31
TIM44YIL022W BUD21Q08492 214 aaPredicted RBP13.03□□□□□ -0.32
TIM44YIL022W YMR074CQ04773 145 aa12.98□□□□□ -0.33
TIM44YIL022W PTP3P40048 928 aa12.97□□□□□ -0.33
TIM44YIL022W PDR5P33302 1511 aaKnown RBP12.92□□□□□ -0.34
TIM44YIL022W BCK1Q01389 1478 aa12.91□□□□□ -0.34
TIM44YIL022W PDR11P40550 1411 aa12.9□□□□□ -0.34
TIM44YIL022W REB1P21538 810 aa12.85□□□□□ -0.35
TIM44YIL022W MRX12P47084 519 aa12.84□□□□□ -0.35
TIM44YIL022W RIA1P53893 1110 aa12.83□□□□□ -0.36
TIM44YIL022W KRE5P22023 1365 aa12.82□□□□□ -0.36
TIM44YIL022W CFT1Q06632 1357 aaKnown RBP12.81□□□□□ -0.36
TIM44YIL022W ENT1Q12518 454 aa12.8□□□□□ -0.36
TIM44YIL022W BUD31P25337 157 aaPredicted RBP12.78□□□□□ -0.36
TIM44YIL022W YNR029CP53729 429 aaKnown RBP12.77□□□□□ -0.37
TIM44YIL022W ENV9Q08651 330 aa12.76□□□□□ -0.37
TIM44YIL022W IMH1Q06704 911 aaKnown RBP12.75□□□□□ -0.37
TIM44YIL022W UBP1P25037 809 aa12.64□□□□□ -0.39
TIM44YIL022W YRF1-2P40105 1681 aa12.62□□□□□ -0.39
TIM44YIL022W GCN2P15442 1659 aa12.61□□□□□ -0.39
TIM44YIL022W SSA1P10591 642 aaKnown RBP12.58□□□□□ -0.4
TIM44YIL022W LEU3P08638 886 aa12.56□□□□□ -0.4
TIM44YIL022W TY3B-IQ7LHG5 1498 aaKnown RBP12.53□□□□□ -0.4
TIM44YIL022W YBL086CP38177 466 aa12.52□□□□□ -0.41
TIM44YIL022W UGA2P38067 497 aa12.51□□□□□ -0.41
TIM44YIL022W NUP192P47054 1683 aa12.51□□□□□ -0.41
TIM44YIL022W CAB1Q04430 367 aa12.5□□□□□ -0.41
TIM44YIL022W RRP5Q05022 1729 aaKnown RBP12.5□□□□□ -0.41
TIM44YIL022W PRP45P28004 379 aaPredicted RBP12.48□□□□□ -0.41
TIM44YIL022W GTT3P39996 337 aa12.47□□□□□ -0.41
TIM44YIL022W RRD1P40454 393 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms