RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W GLC3P32775 704 aa9.6□□□□□ -0.87
SPO12YHR152W AIM7Q12156 149 aa9.6□□□□□ -0.87
SPO12YHR152W UBP14P38237 781 aaKnown RBP9.59□□□□□ -0.87
SPO12YHR152W VHR2P40041 505 aa9.59□□□□□ -0.87
SPO12YHR152W YDR090CQ03193 310 aa9.57□□□□□ -0.88
SPO12YHR152W YLR326WQ06170 240 aaKnown RBP9.56□□□□□ -0.88
SPO12YHR152W GYP5Q12344 894 aa9.56□□□□□ -0.88
SPO12YHR152W GTT3P39996 337 aa9.55□□□□□ -0.88
SPO12YHR152W YGR273CP53329 174 aa9.55□□□□□ -0.88
SPO12YHR152W SOL3P38858 249 aa9.52□□□□□ -0.89
SPO12YHR152W ATF2P53296 535 aa9.48□□□□□ -0.89
SPO12YHR152W YOL036WQ08206 761 aa9.48□□□□□ -0.89
SPO12YHR152W KEX1P09620 729 aa9.47□□□□□ -0.89
SPO12YHR152W ABP1P15891 592 aaKnown RBP9.47□□□□□ -0.89
SPO12YHR152W KIC1P38692 1080 aa9.47□□□□□ -0.89
SPO12YHR152W RAD54P32863 898 aa9.46□□□□□ -0.9
SPO12YHR152W DCW1P36091 449 aa9.46□□□□□ -0.9
SPO12YHR152W NST1P53935 1240 aa9.45□□□□□ -0.9
SPO12YHR152W PCS60P38137 543 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
SPO12YHR152W SET4P42948 560 aa9.43□□□□□ -0.9
SPO12YHR152W MSB4Q12317 492 aa9.41□□□□□ -0.9
SPO12YHR152W HTA1P04911 132 aaKnown RBP9.4□□□□□ -0.9
SPO12YHR152W HTA2P04912 132 aa9.4□□□□□ -0.9
SPO12YHR152W GUA1P38625 525 aaKnown RBP9.4□□□□□ -0.9
SPO12YHR152W PSE1P32337 1089 aaKnown RBP9.39□□□□□ -0.91
SPO12YHR152W AI4P03878 556 aa9.37□□□□□ -0.91
SPO12YHR152W HGH1P48362 394 aaKnown RBP9.37□□□□□ -0.91
SPO12YHR152W RLF2Q12495 606 aa9.37□□□□□ -0.91
SPO12YHR152W MPH3P0CE00 602 aa9.36□□□□□ -0.91
SPO12YHR152W ILV3P39522 585 aaKnown RBP9.36□□□□□ -0.91
SPO12YHR152W ORC6P38826 435 aa9.35□□□□□ -0.91
SPO12YHR152W HPC2Q01448 625 aa9.33□□□□□ -0.92
SPO12YHR152W WSC3Q12215 556 aa9.32□□□□□ -0.92
SPO12YHR152W YEL023CP39992 682 aa9.29□□□□□ -0.92
SPO12YHR152W EAP1P36041 632 aaKnown RBP9.28□□□□□ -0.92
SPO12YHR152W DAN4P47179 1161 aa9.28□□□□□ -0.92
SPO12YHR152W RGR1P19263 1082 aa9.25□□□□□ -0.93
SPO12YHR152W SLI15P38283 698 aa9.25□□□□□ -0.93
SPO12YHR152W TEA1P47988 759 aa9.25□□□□□ -0.93
SPO12YHR152W TRP5P00931 707 aaKnown RBP9.24□□□□□ -0.93
SPO12YHR152W PTC4P38089 393 aa9.24□□□□□ -0.93
SPO12YHR152W TFB3Q03290 321 aa9.24□□□□□ -0.93
SPO12YHR152W GAP1P19145 602 aaPredicted RBP9.23□□□□□ -0.93
SPO12YHR152W CSN12P47130 423 aa9.23□□□□□ -0.93
SPO12YHR152W SSA2P10592 639 aaKnown RBP9.22□□□□□ -0.93
SPO12YHR152W MVP1P40959 511 aaKnown RBP9.22□□□□□ -0.93
SPO12YHR152W VNX1P42839 908 aa9.22□□□□□ -0.93
SPO12YHR152W YBL029C-AQ3E756 94 aa9.22□□□□□ -0.93
SPO12YHR152W CLB5P30283 435 aa9.21□□□□□ -0.94
SPO12YHR152W RPP1BP10622 106 aaKnown RBP9.2□□□□□ -0.94
SPO12YHR152W JIP4Q03361 876 aa9.2□□□□□ -0.94
SPO12YHR152W CSC1Q06538 782 aa9.2□□□□□ -0.94
SPO12YHR152W BRL1P38770 471 aa9.19□□□□□ -0.94
SPO12YHR152W TIF11P38912 153 aaKnown RBP9.18□□□□□ -0.94
SPO12YHR152W ULI1P43604 169 aa9.18□□□□□ -0.94
SPO12YHR152W KTR1P27810 393 aaKnown RBP9.16□□□□□ -0.94
SPO12YHR152W CDC73Q06697 393 aa9.16□□□□□ -0.94
SPO12YHR152W PKC1P24583 1151 aa9.14□□□□□ -0.95
SPO12YHR152W YPR109WQ06104 294 aa9.14□□□□□ -0.95
SPO12YHR152W TFB4Q12004 338 aa9.14□□□□□ -0.95
SPO12YHR152W NIS1P53939 407 aa9.13□□□□□ -0.95
SPO12YHR152W IOC2Q12072 812 aa9.13□□□□□ -0.95
SPO12YHR152W SPP1Q03012 353 aa9.12□□□□□ -0.95
SPO12YHR152W TYW1Q08960 810 aaKnown RBP9.12□□□□□ -0.95
SPO12YHR152W UBP9P39967 754 aa9.1□□□□□ -0.95
SPO12YHR152W HST2P53686 357 aa9.1□□□□□ -0.95
SPO12YHR152W FPK1P53739 893 aa9.1□□□□□ -0.95
SPO12YHR152W YNL035CP53962 389 aaKnown RBP9.1□□□□□ -0.95
SPO12YHR152W GLN1P32288 370 aaKnown RBP9.08□□□□□ -0.96
SPO12YHR152W PEX21P50091 288 aa9.08□□□□□ -0.96
SPO12YHR152W YMR196WQ04336 1088 aa9.08□□□□□ -0.96
SPO12YHR152W MID1P41821 548 aa9.07□□□□□ -0.96
SPO12YHR152W PML39Q03760 334 aa9.07□□□□□ -0.96
SPO12YHR152W DPL1Q05567 589 aa9.07□□□□□ -0.96
SPO12YHR152W SIT4P20604 311 aa9.05□□□□□ -0.96
SPO12YHR152W MPC54Q08550 464 aa9.05□□□□□ -0.96
SPO12YHR152W TUM1Q08686 304 aaKnown RBP9.05□□□□□ -0.96
SPO12YHR152W MMP1Q12372 583 aa9.04□□□□□ -0.96
SPO12YHR152W BIM1P40013 344 aa9.03□□□□□ -0.96
SPO12YHR152W YJL007CP47080 104 aa9.03□□□□□ -0.96
SPO12YHR152W SCJ1P25303 377 aa9.02□□□□□ -0.97
SPO12YHR152W BUD31P25337 157 aaPredicted RBP9.02□□□□□ -0.97
SPO12YHR152W ESS1P22696 170 aa9.01□□□□□ -0.97
SPO12YHR152W RTG1P32607 177 aa9.01□□□□□ -0.97
SPO12YHR152W SEC61P32915 480 aa9.01□□□□□ -0.97
SPO12YHR152W LDB19Q12502 818 aa9.01□□□□□ -0.97
SPO12YHR152W ATG32P40458 529 aa9□□□□□ -0.97
SPO12YHR152W PKH3Q03306 898 aaPredicted RBP9□□□□□ -0.97
SPO12YHR152W ISU2Q12056 156 aa9□□□□□ -0.97
SPO12YHR152W YRR1Q12172 810 aa9□□□□□ -0.97
SPO12YHR152W YBL036CP38197 257 aa8.99□□□□□ -0.97
SPO12YHR152W RAD59Q12223 238 aa8.99□□□□□ -0.97
SPO12YHR152W PEX29Q03370 554 aa8.98□□□□□ -0.97
SPO12YHR152W YJU3P28321 313 aa8.96□□□□□ -0.98
SPO12YHR152W NMA111P53920 997 aa8.96□□□□□ -0.98
SPO12YHR152W CSE4P36012 229 aa8.94□□□□□ -0.98
SPO12YHR152W BIO2P32451 375 aa8.93□□□□□ -0.98
SPO12YHR152W TFG1P41895 735 aaPredicted RBP8.93□□□□□ -0.98
SPO12YHR152W RTF1P53064 558 aa8.93□□□□□ -0.98
SPO12YHR152W YNL115CP53925 644 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms