RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W SNQ2P32568 1501 aaKnown RBP10.71□□□□□ -0.69
APE4YHR113W SAS10Q12136 610 aaPredicted RBP10.71□□□□□ -0.69
APE4YHR113W MLP2P40457 1679 aa10.71□□□□□ -0.7
APE4YHR113W STH1P32597 1359 aa10.66□□□□□ -0.7
APE4YHR113W YRF1-1P0CX20 1796 aa10.64□□□□□ -0.71
APE4YHR113W YRF1-5P0CX21 1796 aa10.64□□□□□ -0.71
APE4YHR113W YRF1-8P0CX22 1796 aa10.64□□□□□ -0.71
APE4YHR113W LTE1P07866 1435 aa10.64□□□□□ -0.71
APE4YHR113W VPS15P22219 1454 aa10.63□□□□□ -0.71
APE4YHR113W PDR15Q04182 1529 aaKnown RBP10.63□□□□□ -0.71
APE4YHR113W ULS1Q08562 1619 aa10.62□□□□□ -0.71
APE4YHR113W GEA2P39993 1459 aaKnown RBP10.62□□□□□ -0.71
APE4YHR113W RTT106P40161 455 aa10.59□□□□□ -0.71
APE4YHR113W SNT2P53127 1403 aa10.58□□□□□ -0.72
APE4YHR113W TAF7Q05021 590 aa10.54□□□□□ -0.72
APE4YHR113W IFH1P39520 1085 aa10.53□□□□□ -0.72
APE4YHR113W SPO14P36126 1683 aa10.51□□□□□ -0.73
APE4YHR113W DRS2P39524 1355 aa10.48□□□□□ -0.73
APE4YHR113W IRC20Q06554 1556 aa10.47□□□□□ -0.73
APE4YHR113W MET10P39692 1035 aa10.47□□□□□ -0.73
APE4YHR113W NUP170P38181 1502 aa10.46□□□□□ -0.73
APE4YHR113W PDR12Q02785 1511 aa10.45□□□□□ -0.74
APE4YHR113W GDB1Q06625 1536 aa10.45□□□□□ -0.74
APE4YHR113W GEA1P47102 1408 aaPredicted RBP10.44□□□□□ -0.74
APE4YHR113W BNI1P41832 1953 aa10.44□□□□□ -0.74
APE4YHR113W ITT1Q04638 464 aa10.42□□□□□ -0.74
APE4YHR113W NUP157P40064 1391 aaKnown RBP10.41□□□□□ -0.74
APE4YHR113W TFA1P36100 482 aa10.39□□□□□ -0.75
APE4YHR113W YBT1P32386 1661 aa10.38□□□□□ -0.75
APE4YHR113W MMS1Q06211 1407 aa10.37□□□□□ -0.75
APE4YHR113W TY3B-GQ99315 1547 aa10.37□□□□□ -0.75
APE4YHR113W PDR10P51533 1564 aa10.37□□□□□ -0.75
APE4YHR113W IQG1Q12280 1495 aa10.36□□□□□ -0.75
APE4YHR113W DOP1Q03921 1698 aa10.34□□□□□ -0.75
APE4YHR113W CAT8P39113 1433 aa10.33□□□□□ -0.76
APE4YHR113W BUD3P25558 1636 aa10.31□□□□□ -0.76
APE4YHR113W DIP2Q12220 943 aaPredicted RBP10.3□□□□□ -0.76
APE4YHR113W ARO1P08566 1588 aaKnown RBP10.29□□□□□ -0.76
APE4YHR113W TRM3Q07527 1436 aa10.29□□□□□ -0.76
APE4YHR113W AVT3P36062 692 aa10.26□□□□□ -0.77
APE4YHR113W CKB1P43639 278 aa10.26□□□□□ -0.77
APE4YHR113W DNF2Q12675 1612 aa10.25□□□□□ -0.77
APE4YHR113W CHC1P22137 1653 aaKnown RBP10.24□□□□□ -0.77
APE4YHR113W ABP1P15891 592 aaKnown RBP10.21□□□□□ -0.78
APE4YHR113W SRB8P25648 1427 aa10.15□□□□□ -0.79
APE4YHR113W YSP2Q06681 1438 aa10.15□□□□□ -0.79
APE4YHR113W BNR1P40450 1375 aa10.14□□□□□ -0.79
APE4YHR113W IKI3Q06706 1349 aaKnown RBP10.14□□□□□ -0.79
APE4YHR113W MIF2P35201 549 aa10.08□□□□□ -0.8
APE4YHR113W YOR093CQ12275 1648 aa10.07□□□□□ -0.8
APE4YHR113W SEC7P11075 2009 aaKnown RBP10.07□□□□□ -0.8
APE4YHR113W SSM4P40318 1319 aa10.05□□□□□ -0.8
APE4YHR113W BUD21Q08492 214 aaPredicted RBP10.04□□□□□ -0.8
APE4YHR113W DNF3Q12674 1656 aa9.99□□□□□ -0.81
APE4YHR113W NUP188P52593 1655 aaKnown RBP9.94□□□□□ -0.82
APE4YHR113W GCN2P15442 1659 aa9.92□□□□□ -0.82
APE4YHR113W VMR1P38735 1592 aa9.92□□□□□ -0.82
APE4YHR113W YAP3P38749 330 aa9.91□□□□□ -0.82
APE4YHR113W URN1Q06525 465 aaKnown RBP9.91□□□□□ -0.82
APE4YHR113W IML1P47170 1584 aa9.89□□□□□ -0.83
APE4YHR113W PDR5P33302 1511 aaKnown RBP9.86□□□□□ -0.83
APE4YHR113W IPL1P38991 367 aa9.81□□□□□ -0.84
APE4YHR113W TYS1P36421 394 aaKnown RBP9.79□□□□□ -0.84
APE4YHR113W YFR006WP43590 535 aa9.79□□□□□ -0.84
APE4YHR113W MAK10Q02197 733 aa9.78□□□□□ -0.84
APE4YHR113W PAF1P38351 445 aa9.76□□□□□ -0.85
APE4YHR113W USO1P25386 1790 aa9.75□□□□□ -0.85
APE4YHR113W PDR11P40550 1411 aa9.74□□□□□ -0.85
APE4YHR113W NOP7P53261 605 aaKnown RBP9.73□□□□□ -0.85
APE4YHR113W HAP1P0CE41 1502 aa9.71□□□□□ -0.85
APE4YHR113W RAV1P47104 1357 aa9.67□□□□□ -0.86
APE4YHR113W TY1B-NL2Q99337 1749 aaKnown RBP9.65□□□□□ -0.87
APE4YHR113W KRE5P22023 1365 aa9.61□□□□□ -0.87
APE4YHR113W MRX12P47084 519 aa9.6□□□□□ -0.87
APE4YHR113W ISW2Q08773 1120 aa9.6□□□□□ -0.87
APE4YHR113W NUP192P47054 1683 aa9.6□□□□□ -0.87
APE4YHR113W RTC1Q08281 1341 aa9.6□□□□□ -0.87
APE4YHR113W BCK1Q01389 1478 aa9.59□□□□□ -0.87
APE4YHR113W RIA1P53893 1110 aa9.57□□□□□ -0.88
APE4YHR113W THI12P42883 340 aa9.55□□□□□ -0.88
APE4YHR113W THI5P43534 340 aa9.55□□□□□ -0.88
APE4YHR113W THI11P47183 340 aa9.55□□□□□ -0.88
APE4YHR113W THI13Q07748 340 aa9.55□□□□□ -0.88
APE4YHR113W RAD9P14737 1309 aa9.55□□□□□ -0.88
APE4YHR113W YMR196WQ04336 1088 aa9.54□□□□□ -0.88
APE4YHR113W CAB1Q04430 367 aa9.54□□□□□ -0.88
APE4YHR113W TAF5P38129 798 aa9.53□□□□□ -0.88
APE4YHR113W CFT1Q06632 1357 aaKnown RBP9.51□□□□□ -0.89
APE4YHR113W ALD4P46367 519 aaKnown RBP9.5□□□□□ -0.89
APE4YHR113W ESL2P36168 1195 aa9.49□□□□□ -0.89
APE4YHR113W NAP1P25293 417 aaKnown RBP9.47□□□□□ -0.89
APE4YHR113W YNR029CP53729 429 aaKnown RBP9.46□□□□□ -0.9
APE4YHR113W TAF8Q03750 510 aa9.46□□□□□ -0.9
APE4YHR113W ORC1P54784 914 aaPredicted RBP9.45□□□□□ -0.9
APE4YHR113W KIP3P53086 805 aaKnown RBP9.42□□□□□ -0.9
APE4YHR113W TY3B-IQ7LHG5 1498 aaKnown RBP9.41□□□□□ -0.9
APE4YHR113W RPG1P38249 964 aaKnown RBP9.4□□□□□ -0.91
APE4YHR113W RCM1P53972 490 aa9.38□□□□□ -0.91
APE4YHR113W SPE2P21182 396 aa9.37□□□□□ -0.91
APE4YHR113W YLR419WQ06698 1435 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms