RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C VTH1P40438 1549 aa14.21□□□□□ -0.13
SOD2YHR008C VTH2P40890 1549 aa14.21□□□□□ -0.13
SOD2YHR008C TY1B-JR2P47100 1755 aaKnown RBP14.21□□□□□ -0.13
SOD2YHR008C TY1B-ER2Q03619 1755 aa14.21□□□□□ -0.13
SOD2YHR008C TY1B-MR1Q04214 1755 aa14.21□□□□□ -0.13
SOD2YHR008C TY1B-MR2Q04670 1755 aaKnown RBP14.21□□□□□ -0.13
SOD2YHR008C TY1B-LR1Q12088 1755 aaKnown RBP14.21□□□□□ -0.13
SOD2YHR008C TY1B-NL1Q12112 1755 aa14.21□□□□□ -0.13
SOD2YHR008C TY1B-GR1Q12141 1755 aa14.21□□□□□ -0.13
SOD2YHR008C TY1B-BLQ12490 1755 aa14.21□□□□□ -0.13
SOD2YHR008C SNT2P53127 1403 aa14.18□□□□□ -0.14
SOD2YHR008C NUP170P38181 1502 aa14.17□□□□□ -0.14
SOD2YHR008C RPO21P04050 1733 aaKnown RBP14.16□□□□□ -0.14
SOD2YHR008C STU1P38198 1513 aa14.14□□□□□ -0.15
SOD2YHR008C MYO4P32492 1471 aa14.12□□□□□ -0.15
SOD2YHR008C YOR093CQ12275 1648 aa14.11□□□□□ -0.15
SOD2YHR008C MET10P39692 1035 aa14.08□□□□□ -0.16
SOD2YHR008C SPO14P36126 1683 aa14.01□□□□□ -0.17
SOD2YHR008C SNQ2P32568 1501 aaKnown RBP13.98□□□□□ -0.17
SOD2YHR008C TRM3Q07527 1436 aa13.97□□□□□ -0.17
SOD2YHR008C ULS1Q08562 1619 aa13.97□□□□□ -0.17
SOD2YHR008C PDR12Q02785 1511 aa13.92□□□□□ -0.18
SOD2YHR008C DOP1Q03921 1698 aa13.89□□□□□ -0.19
SOD2YHR008C STH1P32597 1359 aa13.88□□□□□ -0.19
SOD2YHR008C IQG1Q12280 1495 aa13.87□□□□□ -0.19
SOD2YHR008C PDR10P51533 1564 aa13.84□□□□□ -0.19
SOD2YHR008C RTT106P40161 455 aa13.83□□□□□ -0.2
SOD2YHR008C GDB1Q06625 1536 aa13.8□□□□□ -0.2
SOD2YHR008C YTA7P40340 1379 aa13.77□□□□□ -0.21
SOD2YHR008C NUP157P40064 1391 aaKnown RBP13.75□□□□□ -0.21
SOD2YHR008C BUD3P25558 1636 aa13.75□□□□□ -0.21
SOD2YHR008C PDR15Q04182 1529 aaKnown RBP13.73□□□□□ -0.21
SOD2YHR008C ARO1P08566 1588 aaKnown RBP13.66□□□□□ -0.22
SOD2YHR008C DNF3Q12674 1656 aa13.63□□□□□ -0.23
SOD2YHR008C MLP2P40457 1679 aa13.59□□□□□ -0.23
SOD2YHR008C YAP3P38749 330 aa13.57□□□□□ -0.24
SOD2YHR008C CHC1P22137 1653 aaKnown RBP13.55□□□□□ -0.24
SOD2YHR008C MAK10Q02197 733 aa13.5□□□□□ -0.25
SOD2YHR008C TY3B-GQ99315 1547 aa13.45□□□□□ -0.26
SOD2YHR008C BNR1P40450 1375 aa13.43□□□□□ -0.26
SOD2YHR008C SEC7P11075 2009 aaKnown RBP13.32□□□□□ -0.28
SOD2YHR008C URN1Q06525 465 aaKnown RBP13.31□□□□□ -0.28
SOD2YHR008C YSP2Q06681 1438 aa13.3□□□□□ -0.28
SOD2YHR008C CAT8P39113 1433 aa13.29□□□□□ -0.28
SOD2YHR008C YMR196WQ04336 1088 aa13.26□□□□□ -0.29
SOD2YHR008C TAF7Q05021 590 aa13.25□□□□□ -0.29
SOD2YHR008C THI12P42883 340 aa13.19□□□□□ -0.3
SOD2YHR008C THI5P43534 340 aa13.19□□□□□ -0.3
SOD2YHR008C THI11P47183 340 aa13.19□□□□□ -0.3
SOD2YHR008C THI13Q07748 340 aa13.19□□□□□ -0.3
SOD2YHR008C SAS10Q12136 610 aaPredicted RBP13.17□□□□□ -0.3
SOD2YHR008C USO1P25386 1790 aa13.17□□□□□ -0.3
SOD2YHR008C IFH1P39520 1085 aa13.16□□□□□ -0.3
SOD2YHR008C CKB1P43639 278 aa13.15□□□□□ -0.3
SOD2YHR008C HAP1P0CE41 1502 aa13.13□□□□□ -0.31
SOD2YHR008C GLN1P32288 370 aaKnown RBP13.12□□□□□ -0.31
SOD2YHR008C TY1B-NL2Q99337 1749 aaKnown RBP13.08□□□□□ -0.32
SOD2YHR008C GEA1P47102 1408 aaPredicted RBP13.08□□□□□ -0.32
SOD2YHR008C YAH1Q12184 172 aaKnown RBP13.07□□□□□ -0.32
SOD2YHR008C IPL1P38991 367 aa13.06□□□□□ -0.32
SOD2YHR008C YBT1P32386 1661 aa13.04□□□□□ -0.32
SOD2YHR008C IML1P47170 1584 aa13□□□□□ -0.33
SOD2YHR008C NUP188P52593 1655 aaKnown RBP12.96□□□□□ -0.33
SOD2YHR008C VMR1P38735 1592 aa12.94□□□□□ -0.34
SOD2YHR008C YIL055CP40523 627 aaKnown RBP12.94□□□□□ -0.34
SOD2YHR008C TYS1P36421 394 aaKnown RBP12.91□□□□□ -0.34
SOD2YHR008C SRB8P25648 1427 aa12.86□□□□□ -0.35
SOD2YHR008C PRI1P10363 409 aa12.85□□□□□ -0.35
SOD2YHR008C APP1P53933 587 aa12.85□□□□□ -0.35
SOD2YHR008C PTP3P40048 928 aa12.81□□□□□ -0.36
SOD2YHR008C YMR074CQ04773 145 aa12.76□□□□□ -0.37
SOD2YHR008C BUD21Q08492 214 aaPredicted RBP12.76□□□□□ -0.37
SOD2YHR008C BCK1Q01389 1478 aa12.71□□□□□ -0.38
SOD2YHR008C PDR5P33302 1511 aaKnown RBP12.67□□□□□ -0.38
SOD2YHR008C PDR11P40550 1411 aa12.65□□□□□ -0.38
SOD2YHR008C CFT1Q06632 1357 aaKnown RBP12.63□□□□□ -0.39
SOD2YHR008C REB1P21538 810 aa12.62□□□□□ -0.39
SOD2YHR008C KRE5P22023 1365 aa12.57□□□□□ -0.4
SOD2YHR008C YNR029CP53729 429 aaKnown RBP12.56□□□□□ -0.4
SOD2YHR008C ENT1Q12518 454 aa12.56□□□□□ -0.4
SOD2YHR008C RIA1P53893 1110 aa12.55□□□□□ -0.4
SOD2YHR008C BUD31P25337 157 aaPredicted RBP12.54□□□□□ -0.4
SOD2YHR008C MRX12P47084 519 aa12.53□□□□□ -0.4
SOD2YHR008C ENV9Q08651 330 aa12.53□□□□□ -0.4
SOD2YHR008C IMH1Q06704 911 aaKnown RBP12.49□□□□□ -0.41
SOD2YHR008C SSA1P10591 642 aaKnown RBP12.37□□□□□ -0.43
SOD2YHR008C UBP1P25037 809 aa12.34□□□□□ -0.43
SOD2YHR008C GCN2P15442 1659 aa12.33□□□□□ -0.44
SOD2YHR008C TY3B-IQ7LHG5 1498 aaKnown RBP12.29□□□□□ -0.44
SOD2YHR008C YBL086CP38177 466 aa12.28□□□□□ -0.44
SOD2YHR008C GTT3P39996 337 aa12.28□□□□□ -0.44
SOD2YHR008C CAB1Q04430 367 aa12.26□□□□□ -0.45
SOD2YHR008C UGA2P38067 497 aa12.25□□□□□ -0.45
SOD2YHR008C YRF1-2P40105 1681 aa12.25□□□□□ -0.45
SOD2YHR008C PRP45P28004 379 aaPredicted RBP12.22□□□□□ -0.45
SOD2YHR008C EDE1P34216 1381 aa12.21□□□□□ -0.45
SOD2YHR008C LEU3P08638 886 aa12.21□□□□□ -0.45
SOD2YHR008C NUP192P47054 1683 aa12.21□□□□□ -0.45
SOD2YHR008C RPN11P43588 306 aaKnown RBP12.2□□□□□ -0.46
SOD2YHR008C ALD4P46367 519 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms