RNA–Protein interactions for RNA: YHL023C

NPR3, Transcript of Subunit of SEA (Seh1-associated), Npr2/3, and Iml1p complexes, yeast

Gene NPR3, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPR3	YHL023C	SCY1	P53009	804 aa		4.22	□□□□□ -1.73
NPR3	YHL023C	COQ8	P27697	501 aa		4.21	□□□□□ -1.73
NPR3	YHL023C	UBP10	P53874	792 aa	Predicted RBP	4.21	□□□□□ -1.73
NPR3	YHL023C	BDF1	P35817	686 aa		4.2	□□□□□ -1.74
NPR3	YHL023C	MAK21	Q12176	1025 aa	Known RBP	4.18	□□□□□ -1.74
NPR3	YHL023C	YGL015C	P33199	130 aa		4.18	□□□□□ -1.74
NPR3	YHL023C	AIM7	Q12156	149 aa		4.18	□□□□□ -1.74
NPR3	YHL023C	ABP1	P15891	592 aa	Known RBP	4.17	□□□□□ -1.74
NPR3	YHL023C	ESP1	Q03018	1630 aa		4.17	□□□□□ -1.74
NPR3	YHL023C	BRL1	P38770	471 aa		4.17	□□□□□ -1.74
NPR3	YHL023C	RPA190	P10964	1664 aa	Known RBP	4.16	□□□□□ -1.74
NPR3	YHL023C	DIT2	P21595	489 aa		4.16	□□□□□ -1.74
NPR3	YHL023C	KIC1	P38692	1080 aa		4.15	□□□□□ -1.74
NPR3	YHL023C	RPL34B	P40525	121 aa	Known RBP	4.15	□□□□□ -1.74
NPR3	YHL023C	GUA1	P38625	525 aa	Known RBP	4.15	□□□□□ -1.75
NPR3	YHL023C	YFR006W	P43590	535 aa		4.15	□□□□□ -1.75
NPR3	YHL023C	ECM5	Q03214	1411 aa		4.15	□□□□□ -1.75
NPR3	YHL023C	CDC25	P04821	1589 aa		4.14	□□□□□ -1.75
NPR3	YHL023C	RKR1	Q04781	1562 aa		4.13	□□□□□ -1.75
NPR3	YHL023C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
NPR3	YHL023C	SGS1	P35187	1447 aa		4.13	□□□□□ -1.75
NPR3	YHL023C	NOP53	Q12080	455 aa	Known RBP	4.13	□□□□□ -1.75
NPR3	YHL023C	VPS29	P38759	282 aa		4.12	□□□□□ -1.75
NPR3	YHL023C	TFB3	Q03290	321 aa		4.12	□□□□□ -1.75
NPR3	YHL023C	DBP1	P24784	617 aa	Known RBP	4.11	□□□□□ -1.75
NPR3	YHL023C	SLX5	P32828	619 aa	Known RBP	4.11	□□□□□ -1.75
NPR3	YHL023C	AIM44	Q99299	758 aa		4.11	□□□□□ -1.75
NPR3	YHL023C	BNI1	P41832	1953 aa		4.11	□□□□□ -1.75
NPR3	YHL023C	HPC2	Q01448	625 aa		4.1	□□□□□ -1.75
NPR3	YHL023C	SSA2	P10592	639 aa	Known RBP	4.1	□□□□□ -1.75
NPR3	YHL023C	VHR2	P40041	505 aa		4.1	□□□□□ -1.75
NPR3	YHL023C	NUP42	P49686	430 aa	Known RBP	4.1	□□□□□ -1.75
NPR3	YHL023C	MAP2	P38174	421 aa	Known RBP	4.09	□□□□□ -1.75
NPR3	YHL023C	COX6	P00427	148 aa		4.09	□□□□□ -1.75
NPR3	YHL023C	YJL007C	P47080	104 aa		4.09	□□□□□ -1.75
NPR3	YHL023C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
NPR3	YHL023C	EDS1	P38073	919 aa		4.09	□□□□□ -1.76
NPR3	YHL023C	SSA1	P10591	642 aa	Known RBP	4.08	□□□□□ -1.76
NPR3	YHL023C	ATH1	P48016	1211 aa		4.08	□□□□□ -1.76
NPR3	YHL023C	YOR238W	Q08634	303 aa		4.08	□□□□□ -1.76
NPR3	YHL023C	YML020W	Q03722	664 aa		4.08	□□□□□ -1.76
NPR3	YHL023C	PTC3	P34221	468 aa	Known RBP	4.08	□□□□□ -1.76
NPR3	YHL023C	PIB1	Q06651	286 aa		4.07	□□□□□ -1.76
NPR3	YHL023C	CSN12	P47130	423 aa		4.07	□□□□□ -1.76
NPR3	YHL023C	GEA2	P39993	1459 aa	Known RBP	4.07	□□□□□ -1.76
NPR3	YHL023C	YOR093C	Q12275	1648 aa		4.07	□□□□□ -1.76
NPR3	YHL023C	STS1	P38637	319 aa		4.07	□□□□□ -1.76
NPR3	YHL023C	GEF1	P37020	779 aa		4.06	□□□□□ -1.76
NPR3	YHL023C	SLX8	P40072	274 aa		4.06	□□□□□ -1.76
NPR3	YHL023C	TY1B-BR	Q12193	1756 aa		4.06	□□□□□ -1.76
NPR3	YHL023C	TY1B-GR3	Q12316	1755 aa		4.06	□□□□□ -1.76
NPR3	YHL023C	TY1B-OR	Q92393	1755 aa		4.06	□□□□□ -1.76
NPR3	YHL023C	RPO31	P04051	1460 aa		4.05	□□□□□ -1.76
NPR3	YHL023C	UBP14	P38237	781 aa	Known RBP	4.05	□□□□□ -1.76
NPR3	YHL023C	SSA4	P22202	642 aa	Known RBP	4.05	□□□□□ -1.76
NPR3	YHL023C	RAD54	P32863	898 aa		4.05	□□□□□ -1.76
NPR3	YHL023C	YBL036C	P38197	257 aa		4.05	□□□□□ -1.76
NPR3	YHL023C	RPL34A	P87262	121 aa	Predicted RBP	4.05	□□□□□ -1.76
NPR3	YHL023C	PKC1	P24583	1151 aa		4.04	□□□□□ -1.76
NPR3	YHL023C	BIM1	P40013	344 aa		4.04	□□□□□ -1.76
NPR3	YHL023C	TGL3	P40308	642 aa		4.04	□□□□□ -1.76
NPR3	YHL023C	GRE2	Q12068	342 aa	Known RBP	4.04	□□□□□ -1.76
NPR3	YHL023C	SLD2	P34252	453 aa		4.04	□□□□□ -1.76
NPR3	YHL023C	YMR196W	Q04336	1088 aa		4.03	□□□□□ -1.76
NPR3	YHL023C	DNF2	Q12675	1612 aa		4.02	□□□□□ -1.77
NPR3	YHL023C	YPR204W	Q08995	1032 aa		4.02	□□□□□ -1.77
NPR3	YHL023C	NOP7	P53261	605 aa	Known RBP	4.02	□□□□□ -1.77
NPR3	YHL023C	YPK9	Q12697	1472 aa		4.02	□□□□□ -1.77
NPR3	YHL023C	MST1	P07236	462 aa		4.02	□□□□□ -1.77
NPR3	YHL023C	TEA1	P47988	759 aa		4.01	□□□□□ -1.77
NPR3	YHL023C	SUB2	Q07478	446 aa	Known RBP	4.01	□□□□□ -1.77
NPR3	YHL023C	HAP1	P0CE41	1502 aa		4.01	□□□□□ -1.77
NPR3	YHL023C	ATG32	P40458	529 aa		4	□□□□□ -1.77
NPR3	YHL023C	PSE1	P32337	1089 aa	Known RBP	4	□□□□□ -1.77
NPR3	YHL023C	GTT3	P39996	337 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	GUT1	P32190	709 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TIF4632	P39936	914 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-H	O13535	1793 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-DR5	P0C2I2	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-DR6	P0C2I3	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-LR2	P0C2I5	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-PR2	P0C2J0	1756 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-JR1	P47098	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-ML2	Q03434	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-ER1	Q03612	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-ML1	Q04711	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-GR2	Q12269	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-OL	Q12273	1755 aa		3.99	□□□□□ -1.77
NPR3	YHL023C	TY1B-PL	Q12414	1755 aa	Known RBP	3.99	□□□□□ -1.77
NPR3	YHL023C	RPP1B	P10622	106 aa	Known RBP	3.98	□□□□□ -1.77
NPR3	YHL023C	CPS1	P27614	576 aa		3.98	□□□□□ -1.77
NPR3	YHL023C	YAP5	P40574	245 aa		3.98	□□□□□ -1.77
NPR3	YHL023C	TYW1	Q08960	810 aa	Known RBP	3.98	□□□□□ -1.77
NPR3	YHL023C	TAF2	P23255	1407 aa		3.98	□□□□□ -1.77
NPR3	YHL023C	TRM3	Q07527	1436 aa		3.98	□□□□□ -1.77
NPR3	YHL023C	YLR326W	Q06170	240 aa	Known RBP	3.98	□□□□□ -1.77
NPR3	YHL023C	TY2B-LR1	P0C2J3	1770 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms