RNA–Protein interactions for RNA: YGR236C

SPG1, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG1, Length 288 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG1YGR236C TY1B-LR1Q12088 1755 aaKnown RBP12.29□□□□□ -0.44
SPG1YGR236C TY1B-NL1Q12112 1755 aa12.29□□□□□ -0.44
SPG1YGR236C TY1B-GR1Q12141 1755 aa12.29□□□□□ -0.44
SPG1YGR236C TY1B-BLQ12490 1755 aa12.29□□□□□ -0.44
SPG1YGR236C RPO21P04050 1733 aaKnown RBP12.25□□□□□ -0.45
SPG1YGR236C DOP1Q03921 1698 aa12.24□□□□□ -0.45
SPG1YGR236C SPO14P36126 1683 aa12.23□□□□□ -0.45
SPG1YGR236C SPP41P38904 1435 aa12.14□□□□□ -0.47
SPG1YGR236C PDR15Q04182 1529 aaKnown RBP12.08□□□□□ -0.48
SPG1YGR236C ULS1Q08562 1619 aa12.08□□□□□ -0.48
SPG1YGR236C VTH1P40438 1549 aa12.07□□□□□ -0.48
SPG1YGR236C VTH2P40890 1549 aa12.07□□□□□ -0.48
SPG1YGR236C TSC11P40061 1430 aa12.07□□□□□ -0.48
SPG1YGR236C SNT2P53127 1403 aa12.03□□□□□ -0.48
SPG1YGR236C TRM3Q07527 1436 aa12.03□□□□□ -0.48
SPG1YGR236C DNF3Q12674 1656 aa12□□□□□ -0.49
SPG1YGR236C SMC4Q12267 1418 aa11.99□□□□□ -0.49
SPG1YGR236C ARO1P08566 1588 aaKnown RBP11.91□□□□□ -0.5
SPG1YGR236C PDR10P51533 1564 aa11.91□□□□□ -0.5
SPG1YGR236C YOR1P53049 1477 aa11.9□□□□□ -0.5
SPG1YGR236C POL1P13382 1468 aa11.89□□□□□ -0.51
SPG1YGR236C MYO4P32492 1471 aa11.89□□□□□ -0.51
SPG1YGR236C MET10P39692 1035 aa11.89□□□□□ -0.51
SPG1YGR236C GDB1Q06625 1536 aa11.86□□□□□ -0.51
SPG1YGR236C PDR12Q02785 1511 aa11.85□□□□□ -0.51
SPG1YGR236C IQG1Q12280 1495 aa11.84□□□□□ -0.51
SPG1YGR236C DRS1P32892 752 aaKnown RBP11.83□□□□□ -0.52
SPG1YGR236C SNQ2P32568 1501 aaKnown RBP11.82□□□□□ -0.52
SPG1YGR236C CHC1P22137 1653 aaKnown RBP11.78□□□□□ -0.52
SPG1YGR236C BUD3P25558 1636 aa11.74□□□□□ -0.53
SPG1YGR236C USO1P25386 1790 aa11.74□□□□□ -0.53
SPG1YGR236C STU1P38198 1513 aa11.72□□□□□ -0.53
SPG1YGR236C GLN1P32288 370 aaKnown RBP11.7□□□□□ -0.54
SPG1YGR236C MLP2P40457 1679 aa11.68□□□□□ -0.54
SPG1YGR236C YTA7P40340 1379 aa11.66□□□□□ -0.54
SPG1YGR236C MAK10Q02197 733 aa11.64□□□□□ -0.55
SPG1YGR236C NUP157P40064 1391 aaKnown RBP11.61□□□□□ -0.55
SPG1YGR236C BNR1P40450 1375 aa11.61□□□□□ -0.55
SPG1YGR236C YAP3P38749 330 aa11.6□□□□□ -0.55
SPG1YGR236C TY3B-GQ99315 1547 aa11.6□□□□□ -0.55
SPG1YGR236C RTT106P40161 455 aa11.53□□□□□ -0.56
SPG1YGR236C STH1P32597 1359 aa11.53□□□□□ -0.56
SPG1YGR236C YSP2Q06681 1438 aa11.52□□□□□ -0.57
SPG1YGR236C PRI1P10363 409 aa11.45□□□□□ -0.58
SPG1YGR236C THI12P42883 340 aa11.44□□□□□ -0.58
SPG1YGR236C THI5P43534 340 aa11.44□□□□□ -0.58
SPG1YGR236C THI11P47183 340 aa11.44□□□□□ -0.58
SPG1YGR236C THI13Q07748 340 aa11.44□□□□□ -0.58
SPG1YGR236C YAH1Q12184 172 aaKnown RBP11.42□□□□□ -0.58
SPG1YGR236C YMR196WQ04336 1088 aa11.41□□□□□ -0.58
SPG1YGR236C SEC7P11075 2009 aaKnown RBP11.4□□□□□ -0.58
SPG1YGR236C TY1B-NL2Q99337 1749 aaKnown RBP11.4□□□□□ -0.58
SPG1YGR236C YIL055CP40523 627 aaKnown RBP11.38□□□□□ -0.59
SPG1YGR236C HAP1P0CE41 1502 aa11.3□□□□□ -0.6
SPG1YGR236C YBT1P32386 1661 aa11.27□□□□□ -0.6
SPG1YGR236C NUP188P52593 1655 aaKnown RBP11.25□□□□□ -0.61
SPG1YGR236C APP1P53933 587 aa11.23□□□□□ -0.61
SPG1YGR236C RRD1P40454 393 aaKnown RBP11.22□□□□□ -0.61
SPG1YGR236C YMR074CQ04773 145 aa11.21□□□□□ -0.61
SPG1YGR236C URN1Q06525 465 aaKnown RBP11.21□□□□□ -0.61
SPG1YGR236C IML1P47170 1584 aa11.2□□□□□ -0.62
SPG1YGR236C VMR1P38735 1592 aa11.11□□□□□ -0.63
SPG1YGR236C SSA1P10591 642 aaKnown RBP11.09□□□□□ -0.63
SPG1YGR236C BCK1Q01389 1478 aa11.03□□□□□ -0.64
SPG1YGR236C BUD31P25337 157 aaPredicted RBP11.02□□□□□ -0.65
SPG1YGR236C PTP3P40048 928 aa11.01□□□□□ -0.65
SPG1YGR236C CAT8P39113 1433 aa10.97□□□□□ -0.65
SPG1YGR236C IPL1P38991 367 aa10.96□□□□□ -0.65
SPG1YGR236C PDR11P40550 1411 aa10.92□□□□□ -0.66
SPG1YGR236C REB1P21538 810 aa10.9□□□□□ -0.66
SPG1YGR236C CKB1P43639 278 aa10.86□□□□□ -0.67
SPG1YGR236C TYS1P36421 394 aaKnown RBP10.82□□□□□ -0.68
SPG1YGR236C ENT1Q12518 454 aa10.81□□□□□ -0.68
SPG1YGR236C YRF1-2P40105 1681 aa10.8□□□□□ -0.68
SPG1YGR236C ENV9Q08651 330 aa10.79□□□□□ -0.68
SPG1YGR236C IMH1Q06704 911 aaKnown RBP10.78□□□□□ -0.68
SPG1YGR236C PDR5P33302 1511 aaKnown RBP10.77□□□□□ -0.69
SPG1YGR236C GEA1P47102 1408 aaPredicted RBP10.76□□□□□ -0.69
SPG1YGR236C YBL086CP38177 466 aa10.76□□□□□ -0.69
SPG1YGR236C UBP1P25037 809 aa10.72□□□□□ -0.69
SPG1YGR236C IFH1P39520 1085 aa10.71□□□□□ -0.69
SPG1YGR236C UGA2P38067 497 aa10.68□□□□□ -0.7
SPG1YGR236C GTT3P39996 337 aa10.67□□□□□ -0.7
SPG1YGR236C TAF7Q05021 590 aa10.63□□□□□ -0.71
SPG1YGR236C CFT1Q06632 1357 aaKnown RBP10.63□□□□□ -0.71
SPG1YGR236C GCN2P15442 1659 aa10.58□□□□□ -0.72
SPG1YGR236C KRE5P22023 1365 aa10.58□□□□□ -0.72
SPG1YGR236C SAS10Q12136 610 aaPredicted RBP10.58□□□□□ -0.72
SPG1YGR236C YNR029CP53729 429 aaKnown RBP10.57□□□□□ -0.72
SPG1YGR236C RRP5Q05022 1729 aaKnown RBP10.57□□□□□ -0.72
SPG1YGR236C RPN11P43588 306 aaKnown RBP10.53□□□□□ -0.72
SPG1YGR236C RIA1P53893 1110 aa10.53□□□□□ -0.72
SPG1YGR236C SSA2P10592 639 aaKnown RBP10.52□□□□□ -0.73
SPG1YGR236C EDE1P34216 1381 aa10.52□□□□□ -0.73
SPG1YGR236C SRB8P25648 1427 aa10.51□□□□□ -0.73
SPG1YGR236C ALD2P47771 506 aa10.51□□□□□ -0.73
SPG1YGR236C LEU3P08638 886 aa10.47□□□□□ -0.73
SPG1YGR236C MRX12P47084 519 aa10.46□□□□□ -0.73
SPG1YGR236C LYS4P49367 693 aaPredicted RBP10.46□□□□□ -0.73
SPG1YGR236C URB1P34241 1764 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms