RNA–Protein interactions for RNA: YFR013W

IOC3, Transcript of Subunit of the Isw1a complex, yeast

Gene IOC3, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC3	YFR013W	NUP42	P49686	430 aa	Known RBP	4.72	□□□□□ -1.65
IOC3	YFR013W	YGR273C	P53329	174 aa		4.72	□□□□□ -1.65
IOC3	YFR013W	YDR090C	Q03193	310 aa		4.72	□□□□□ -1.65
IOC3	YFR013W	YOL036W	Q08206	761 aa		4.72	□□□□□ -1.65
IOC3	YFR013W	VHR2	P40041	505 aa		4.71	□□□□□ -1.65
IOC3	YFR013W	YLR326W	Q06170	240 aa	Known RBP	4.71	□□□□□ -1.65
IOC3	YFR013W	URN1	Q06525	465 aa	Known RBP	4.71	□□□□□ -1.65
IOC3	YFR013W	ABP1	P15891	592 aa	Known RBP	4.7	□□□□□ -1.66
IOC3	YFR013W	NST1	P53935	1240 aa		4.7	□□□□□ -1.66
IOC3	YFR013W	DIT2	P21595	489 aa		4.69	□□□□□ -1.66
IOC3	YFR013W	MSB4	Q12317	492 aa		4.69	□□□□□ -1.66
IOC3	YFR013W	SET4	P42948	560 aa		4.69	□□□□□ -1.66
IOC3	YFR013W	DCW1	P36091	449 aa		4.68	□□□□□ -1.66
IOC3	YFR013W	AIM44	Q99299	758 aa		4.68	□□□□□ -1.66
IOC3	YFR013W	GLC3	P32775	704 aa		4.68	□□□□□ -1.66
IOC3	YFR013W	AIM7	Q12156	149 aa		4.68	□□□□□ -1.66
IOC3	YFR013W	KEX1	P09620	729 aa		4.67	□□□□□ -1.66
IOC3	YFR013W	HTA1	P04911	132 aa	Known RBP	4.67	□□□□□ -1.66
IOC3	YFR013W	HTA2	P04912	132 aa		4.67	□□□□□ -1.66
IOC3	YFR013W	KIN1	P13185	1064 aa		4.67	□□□□□ -1.66
IOC3	YFR013W	RAD54	P32863	898 aa		4.65	□□□□□ -1.66
IOC3	YFR013W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
IOC3	YFR013W	DMA2	P53924	522 aa		4.65	□□□□□ -1.67
IOC3	YFR013W	ILV3	P39522	585 aa	Known RBP	4.64	□□□□□ -1.67
IOC3	YFR013W	WSC3	Q12215	556 aa		4.64	□□□□□ -1.67
IOC3	YFR013W	AI4	P03878	556 aa		4.64	□□□□□ -1.67
IOC3	YFR013W	MPH3	P0CE00	602 aa		4.64	□□□□□ -1.67
IOC3	YFR013W	KIC1	P38692	1080 aa		4.64	□□□□□ -1.67
IOC3	YFR013W	YBL029C-A	Q3E756	94 aa		4.63	□□□□□ -1.67
IOC3	YFR013W	EAP1	P36041	632 aa	Known RBP	4.62	□□□□□ -1.67
IOC3	YFR013W	VNX1	P42839	908 aa		4.62	□□□□□ -1.67
IOC3	YFR013W	YEL023C	P39992	682 aa		4.62	□□□□□ -1.67
IOC3	YFR013W	PSE1	P32337	1089 aa	Known RBP	4.61	□□□□□ -1.67
IOC3	YFR013W	ORC6	P38826	435 aa		4.61	□□□□□ -1.67
IOC3	YFR013W	TRP5	P00931	707 aa	Known RBP	4.61	□□□□□ -1.67
IOC3	YFR013W	NAP1	P25293	417 aa	Known RBP	4.61	□□□□□ -1.67
IOC3	YFR013W	ATF2	P53296	535 aa		4.61	□□□□□ -1.67
IOC3	YFR013W	IOC4	Q04213	475 aa		4.6	□□□□□ -1.67
IOC3	YFR013W	TIF11	P38912	153 aa	Known RBP	4.59	□□□□□ -1.67
IOC3	YFR013W	DAN4	P47179	1161 aa		4.59	□□□□□ -1.67
IOC3	YFR013W	PTC4	P38089	393 aa		4.58	□□□□□ -1.68
IOC3	YFR013W	SLI15	P38283	698 aa		4.58	□□□□□ -1.68
IOC3	YFR013W	ULI1	P43604	169 aa		4.57	□□□□□ -1.68
IOC3	YFR013W	JIP4	Q03361	876 aa		4.57	□□□□□ -1.68
IOC3	YFR013W	GAP1	P19145	602 aa	Predicted RBP	4.57	□□□□□ -1.68
IOC3	YFR013W	GUA1	P38625	525 aa	Known RBP	4.57	□□□□□ -1.68
IOC3	YFR013W	UBP9	P39967	754 aa		4.57	□□□□□ -1.68
IOC3	YFR013W	IOC2	Q12072	812 aa		4.57	□□□□□ -1.68
IOC3	YFR013W	SPP1	Q03012	353 aa		4.56	□□□□□ -1.68
IOC3	YFR013W	RGR1	P19263	1082 aa		4.55	□□□□□ -1.68
IOC3	YFR013W	YRB30	P53107	440 aa	Predicted RBP	4.55	□□□□□ -1.68
IOC3	YFR013W	MVP1	P40959	511 aa	Known RBP	4.54	□□□□□ -1.68
IOC3	YFR013W	ORC1	P54784	914 aa	Predicted RBP	4.54	□□□□□ -1.68
IOC3	YFR013W	YNL035C	P53962	389 aa	Known RBP	4.53	□□□□□ -1.68
IOC3	YFR013W	HPC2	Q01448	625 aa		4.53	□□□□□ -1.68
IOC3	YFR013W	CSC1	Q06538	782 aa		4.53	□□□□□ -1.68
IOC3	YFR013W	TEA1	P47988	759 aa		4.53	□□□□□ -1.68
IOC3	YFR013W	CDC73	Q06697	393 aa		4.53	□□□□□ -1.68
IOC3	YFR013W	CLB5	P30283	435 aa		4.52	□□□□□ -1.69
IOC3	YFR013W	RPP1B	P10622	106 aa	Known RBP	4.51	□□□□□ -1.69
IOC3	YFR013W	LDB19	Q12502	818 aa		4.51	□□□□□ -1.69
IOC3	YFR013W	HGH1	P48362	394 aa	Known RBP	4.5	□□□□□ -1.69
IOC3	YFR013W	TFB4	Q12004	338 aa		4.5	□□□□□ -1.69
IOC3	YFR013W	MID1	P41821	548 aa		4.5	□□□□□ -1.69
IOC3	YFR013W	PML39	Q03760	334 aa		4.5	□□□□□ -1.69
IOC3	YFR013W	RTG1	P32607	177 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	SEC61	P32915	480 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	CSN12	P47130	423 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	SSA2	P10592	639 aa	Known RBP	4.49	□□□□□ -1.69
IOC3	YFR013W	DPL1	Q05567	589 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	YPR109W	Q06104	294 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	MPC54	Q08550	464 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	RLF2	Q12495	606 aa		4.49	□□□□□ -1.69
IOC3	YFR013W	KTR1	P27810	393 aa	Known RBP	4.48	□□□□□ -1.69
IOC3	YFR013W	NIS1	P53939	407 aa		4.48	□□□□□ -1.69
IOC3	YFR013W	TFB3	Q03290	321 aa		4.48	□□□□□ -1.69
IOC3	YFR013W	BUD31	P25337	157 aa	Predicted RBP	4.46	□□□□□ -1.7
IOC3	YFR013W	PEX21	P50091	288 aa		4.46	□□□□□ -1.7
IOC3	YFR013W	BRL1	P38770	471 aa		4.46	□□□□□ -1.7
IOC3	YFR013W	HST2	P53686	357 aa		4.46	□□□□□ -1.7
IOC3	YFR013W	FPK1	P53739	893 aa		4.46	□□□□□ -1.7
IOC3	YFR013W	TUM1	Q08686	304 aa	Known RBP	4.46	□□□□□ -1.7
IOC3	YFR013W	SIT4	P20604	311 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	TYW1	Q08960	810 aa	Known RBP	4.45	□□□□□ -1.7
IOC3	YFR013W	PKC1	P24583	1151 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	PEX29	Q03370	554 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	YDL129W	Q07555	291 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	ISU2	Q12056	156 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	NCR1	Q12200	1170 aa		4.45	□□□□□ -1.7
IOC3	YFR013W	FKH1	P40466	484 aa		4.44	□□□□□ -1.7
IOC3	YFR013W	YMR196W	Q04336	1088 aa		4.44	□□□□□ -1.7
IOC3	YFR013W	GLN1	P32288	370 aa	Known RBP	4.43	□□□□□ -1.7
IOC3	YFR013W	NMA111	P53920	997 aa		4.43	□□□□□ -1.7
IOC3	YFR013W	YRR1	Q12172	810 aa		4.43	□□□□□ -1.7
IOC3	YFR013W	TFG1	P41895	735 aa	Predicted RBP	4.43	□□□□□ -1.7
IOC3	YFR013W	MMP1	Q12372	583 aa		4.42	□□□□□ -1.7
IOC3	YFR013W	SCJ1	P25303	377 aa		4.41	□□□□□ -1.7
IOC3	YFR013W	ESS1	P22696	170 aa		4.41	□□□□□ -1.7
IOC3	YFR013W	ARH1	P48360	493 aa		4.4	□□□□□ -1.71
IOC3	YFR013W	RTF1	P53064	558 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms