RNA–Protein interactions for RNA: YFL018C

LPD1, Transcript of Dihydrolipoamide dehydrogenase, yeastyeast

Gene LPD1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LPD1YFL018C YIR014WP40570 242 aa9.67□□□□□ -0.86
LPD1YFL018C YNL011CP53980 444 aa9.67□□□□□ -0.86
LPD1YFL018C RAD26P40352 1085 aa9.66□□□□□ -0.86
LPD1YFL018C PIL1P53252 339 aaKnown RBP9.66□□□□□ -0.86
LPD1YFL018C EDE1P34216 1381 aa9.66□□□□□ -0.86
LPD1YFL018C VPS4P52917 437 aa9.65□□□□□ -0.86
LPD1YFL018C MSH4P40965 878 aaPredicted RBP9.62□□□□□ -0.87
LPD1YFL018C PAN1P32521 1480 aa9.61□□□□□ -0.87
LPD1YFL018C NOT3P06102 836 aaKnown RBP9.61□□□□□ -0.87
LPD1YFL018C YPP1P46951 817 aa9.61□□□□□ -0.87
LPD1YFL018C PSD2P53037 1138 aaKnown RBP9.61□□□□□ -0.87
LPD1YFL018C SPT6P23615 1451 aaKnown RBP9.6□□□□□ -0.87
LPD1YFL018C GCN2P15442 1659 aa9.59□□□□□ -0.87
LPD1YFL018C SCC2Q04002 1493 aa9.59□□□□□ -0.87
LPD1YFL018C RPN1P38764 993 aaKnown RBP9.59□□□□□ -0.87
LPD1YFL018C ABP1P15891 592 aaKnown RBP9.58□□□□□ -0.88
LPD1YFL018C DNA2P38859 1522 aa9.58□□□□□ -0.88
LPD1YFL018C TAF2P23255 1407 aa9.58□□□□□ -0.88
LPD1YFL018C DJP1P40564 432 aa9.57□□□□□ -0.88
LPD1YFL018C RLP24Q07915 199 aaKnown RBP9.57□□□□□ -0.88
LPD1YFL018C PRP3Q03338 469 aaPredicted RBP9.56□□□□□ -0.88
LPD1YFL018C BPT1P14772 1559 aa9.56□□□□□ -0.88
LPD1YFL018C SIC1P38634 284 aa9.56□□□□□ -0.88
LPD1YFL018C MSH3P25336 1018 aa9.55□□□□□ -0.88
LPD1YFL018C SWE1P32944 819 aa9.55□□□□□ -0.88
LPD1YFL018C NNF2P53253 936 aa9.55□□□□□ -0.88
LPD1YFL018C SSK2P53599 1579 aa9.54□□□□□ -0.88
LPD1YFL018C DOS2P54858 310 aa9.54□□□□□ -0.88
LPD1YFL018C IOC4Q04213 475 aa9.54□□□□□ -0.88
LPD1YFL018C ETT1Q08421 412 aaKnown RBP9.54□□□□□ -0.88
LPD1YFL018C REV3P14284 1504 aa9.53□□□□□ -0.88
LPD1YFL018C SIN3P22579 1536 aa9.53□□□□□ -0.88
LPD1YFL018C SWR1Q05471 1514 aa9.53□□□□□ -0.88
LPD1YFL018C BYE1P36106 594 aa9.53□□□□□ -0.88
LPD1YFL018C DSN1P40568 576 aa9.53□□□□□ -0.88
LPD1YFL018C MHP1P43638 1398 aa9.53□□□□□ -0.88
LPD1YFL018C PCT1P13259 424 aa9.52□□□□□ -0.88
LPD1YFL018C POL1P13382 1468 aa9.52□□□□□ -0.89
LPD1YFL018C HSL1P34244 1518 aa9.51□□□□□ -0.89
LPD1YFL018C LTV1P34078 463 aa9.51□□□□□ -0.89
LPD1YFL018C TAN1P53072 289 aaPredicted RBP9.51□□□□□ -0.89
LPD1YFL018C TY1B-DR4Q07793 1604 aa9.5□□□□□ -0.89
LPD1YFL018C MSP1P28737 362 aa9.5□□□□□ -0.89
LPD1YFL018C VPS24P36095 224 aaKnown RBP9.5□□□□□ -0.89
LPD1YFL018C CLB5P30283 435 aa9.49□□□□□ -0.89
LPD1YFL018C NST1P53935 1240 aa9.49□□□□□ -0.89
LPD1YFL018C GRX3Q03835 250 aa9.49□□□□□ -0.89
LPD1YFL018C IFH1P39520 1085 aa9.48□□□□□ -0.89
LPD1YFL018C CHZ1P40019 153 aaPredicted RBP9.47□□□□□ -0.89
LPD1YFL018C ARL1P38116 183 aaKnown RBP9.46□□□□□ -0.89
LPD1YFL018C TRM3Q07527 1436 aa9.46□□□□□ -0.89
LPD1YFL018C ESP1Q03018 1630 aa9.46□□□□□ -0.9
LPD1YFL018C YCF1P39109 1515 aaKnown RBP9.46□□□□□ -0.9
LPD1YFL018C KNS1P32350 737 aaPredicted RBP9.46□□□□□ -0.9
LPD1YFL018C CBF5P33322 483 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
LPD1YFL018C MED8P38304 223 aa9.46□□□□□ -0.9
LPD1YFL018C RPN7Q06103 429 aaKnown RBP9.46□□□□□ -0.9
LPD1YFL018C ECM1P39715 212 aa9.44□□□□□ -0.9
LPD1YFL018C NUP159P40477 1460 aa9.43□□□□□ -0.9
LPD1YFL018C SRP54P20424 541 aaKnown RBP9.43□□□□□ -0.9
LPD1YFL018C TPM2P40414 161 aa9.43□□□□□ -0.9
LPD1YFL018C ECM16Q04217 1267 aaKnown RBP9.43□□□□□ -0.9
LPD1YFL018C YSH1Q06224 779 aaPredicted RBP9.43□□□□□ -0.9
LPD1YFL018C NOP8Q08287 484 aaPredicted RBP9.43□□□□□ -0.9
LPD1YFL018C BMS1Q08965 1183 aaKnown RBP9.43□□□□□ -0.9
LPD1YFL018C RPS0AP32905 252 aaKnown RBP9.42□□□□□ -0.9
LPD1YFL018C HIR3P47171 1648 aa9.42□□□□□ -0.9
LPD1YFL018C GEA1P47102 1408 aaPredicted RBP9.42□□□□□ -0.9
LPD1YFL018C KIP3P53086 805 aaKnown RBP9.41□□□□□ -0.9
LPD1YFL018C TCD1P38756 429 aa9.41□□□□□ -0.9
LPD1YFL018C VPS60Q03390 229 aa9.41□□□□□ -0.9
LPD1YFL018C KOG1P38873 1557 aa9.4□□□□□ -0.9
LPD1YFL018C CLB1P24868 471 aa9.4□□□□□ -0.91
LPD1YFL018C CIN4P39110 191 aa9.4□□□□□ -0.91
LPD1YFL018C TSC11P40061 1430 aa9.4□□□□□ -0.91
LPD1YFL018C RNT1Q02555 471 aa9.39□□□□□ -0.91
LPD1YFL018C ESC1Q03661 1658 aaKnown RBP9.39□□□□□ -0.91
LPD1YFL018C RAD2P07276 1031 aa9.38□□□□□ -0.91
LPD1YFL018C ESC2Q06340 456 aa9.38□□□□□ -0.91
LPD1YFL018C DEP1P31385 405 aa9.37□□□□□ -0.91
LPD1YFL018C SWI3P32591 825 aa9.37□□□□□ -0.91
LPD1YFL018C CDC45Q08032 650 aa9.37□□□□□ -0.91
LPD1YFL018C LSP1Q12230 341 aaKnown RBP9.37□□□□□ -0.91
LPD1YFL018C SAP190P36123 1033 aa9.36□□□□□ -0.91
LPD1YFL018C PDR5P33302 1511 aaKnown RBP9.36□□□□□ -0.91
LPD1YFL018C NOP14Q99207 810 aaKnown RBP9.36□□□□□ -0.91
LPD1YFL018C SNQ2P32568 1501 aaKnown RBP9.35□□□□□ -0.91
LPD1YFL018C TIF4632P39936 914 aaKnown RBP9.35□□□□□ -0.91
LPD1YFL018C RAD9P14737 1309 aa9.34□□□□□ -0.91
LPD1YFL018C RAD51P25454 400 aa9.33□□□□□ -0.92
LPD1YFL018C TEA1P47988 759 aa9.33□□□□□ -0.92
LPD1YFL018C HOS3Q02959 697 aaKnown RBP9.33□□□□□ -0.92
LPD1YFL018C RRP15Q06511 250 aaPredicted RBP9.33□□□□□ -0.92
LPD1YFL018C RVB2Q12464 471 aaKnown RBP9.33□□□□□ -0.92
LPD1YFL018C RPP0P05317 312 aaKnown RBP9.32□□□□□ -0.92
LPD1YFL018C PET111P08468 800 aa9.32□□□□□ -0.92
LPD1YFL018C VPS27P40343 622 aaKnown RBP9.32□□□□□ -0.92
LPD1YFL018C SNU71P53207 620 aaKnown RBP9.32□□□□□ -0.92
LPD1YFL018C PAP2P53632 584 aaKnown RBP9.32□□□□□ -0.92
LPD1YFL018C VPS72Q03388 795 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms