RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W SAS10Q12136 610 aaPredicted RBP12.09□□□□□ -0.47
SHC1YER096W TRM732Q03496 1420 aa12.09□□□□□ -0.47
SHC1YER096W STH1P32597 1359 aa12.06□□□□□ -0.48
SHC1YER096W SNT2P53127 1403 aa12.06□□□□□ -0.48
SHC1YER096W YRF1-1P0CX20 1796 aa12.04□□□□□ -0.48
SHC1YER096W YRF1-5P0CX21 1796 aa12.04□□□□□ -0.48
SHC1YER096W YRF1-8P0CX22 1796 aa12.04□□□□□ -0.48
SHC1YER096W NUP159P40477 1460 aa12□□□□□ -0.49
SHC1YER096W MET5P47169 1442 aa11.97□□□□□ -0.49
SHC1YER096W TY3B-GQ99315 1547 aa11.95□□□□□ -0.5
SHC1YER096W IRC20Q06554 1556 aa11.95□□□□□ -0.5
SHC1YER096W GEA1P47102 1408 aaPredicted RBP11.91□□□□□ -0.5
SHC1YER096W YBT1P32386 1661 aa11.91□□□□□ -0.5
SHC1YER096W FAP1P53971 965 aa11.91□□□□□ -0.5
SHC1YER096W GEA2P39993 1459 aaKnown RBP11.9□□□□□ -0.51
SHC1YER096W SPO14P36126 1683 aa11.89□□□□□ -0.51
SHC1YER096W TAF7Q05021 590 aa11.86□□□□□ -0.51
SHC1YER096W IFH1P39520 1085 aa11.84□□□□□ -0.51
SHC1YER096W VPS15P22219 1454 aa11.83□□□□□ -0.52
SHC1YER096W PDR12Q02785 1511 aa11.81□□□□□ -0.52
SHC1YER096W GDB1Q06625 1536 aa11.81□□□□□ -0.52
SHC1YER096W NUP170P38181 1502 aa11.79□□□□□ -0.52
SHC1YER096W PDR10P51533 1564 aa11.75□□□□□ -0.53
SHC1YER096W RTT106P40161 455 aa11.74□□□□□ -0.53
SHC1YER096W ARO1P08566 1588 aaKnown RBP11.71□□□□□ -0.54
SHC1YER096W LTE1P07866 1435 aa11.71□□□□□ -0.54
SHC1YER096W CAT8P39113 1433 aa11.69□□□□□ -0.54
SHC1YER096W NUP157P40064 1391 aaKnown RBP11.68□□□□□ -0.54
SHC1YER096W IKI3Q06706 1349 aaKnown RBP11.67□□□□□ -0.54
SHC1YER096W MET10P39692 1035 aa11.67□□□□□ -0.54
SHC1YER096W BNI1P41832 1953 aa11.66□□□□□ -0.54
SHC1YER096W BUD3P25558 1636 aa11.66□□□□□ -0.54
SHC1YER096W SSM4P40318 1319 aa11.63□□□□□ -0.55
SHC1YER096W IQG1Q12280 1495 aa11.6□□□□□ -0.55
SHC1YER096W DOP1Q03921 1698 aa11.57□□□□□ -0.56
SHC1YER096W YSP2Q06681 1438 aa11.54□□□□□ -0.56
SHC1YER096W CHC1P22137 1653 aaKnown RBP11.52□□□□□ -0.57
SHC1YER096W DRS2P39524 1355 aa11.51□□□□□ -0.57
SHC1YER096W SRB8P25648 1427 aa11.51□□□□□ -0.57
SHC1YER096W CKB1P43639 278 aa11.48□□□□□ -0.57
SHC1YER096W ITT1Q04638 464 aa11.47□□□□□ -0.57
SHC1YER096W SEC7P11075 2009 aaKnown RBP11.47□□□□□ -0.57
SHC1YER096W TRM3Q07527 1436 aa11.45□□□□□ -0.58
SHC1YER096W GCN2P15442 1659 aa11.38□□□□□ -0.59
SHC1YER096W DNF2Q12675 1612 aa11.37□□□□□ -0.59
SHC1YER096W MMS1Q06211 1407 aa11.37□□□□□ -0.59
SHC1YER096W BNR1P40450 1375 aa11.36□□□□□ -0.59
SHC1YER096W YOR093CQ12275 1648 aa11.34□□□□□ -0.59
SHC1YER096W VMR1P38735 1592 aa11.32□□□□□ -0.6
SHC1YER096W BUD21Q08492 214 aaPredicted RBP11.28□□□□□ -0.6
SHC1YER096W NUP188P52593 1655 aaKnown RBP11.27□□□□□ -0.61
SHC1YER096W PRY3P47033 881 aa11.26□□□□□ -0.61
SHC1YER096W PDR5P33302 1511 aaKnown RBP11.26□□□□□ -0.61
SHC1YER096W BFR2Q06631 534 aaKnown RBP11.25□□□□□ -0.61
SHC1YER096W IML1P47170 1584 aa11.17□□□□□ -0.62
SHC1YER096W PDR11P40550 1411 aa11.17□□□□□ -0.62
SHC1YER096W DNF3Q12674 1656 aa11.14□□□□□ -0.63
SHC1YER096W NUP192P47054 1683 aa11.06□□□□□ -0.64
SHC1YER096W TYS1P36421 394 aaKnown RBP11.02□□□□□ -0.65
SHC1YER096W RAV1P47104 1357 aa11.02□□□□□ -0.65
SHC1YER096W ABP1P15891 592 aaKnown RBP10.99□□□□□ -0.65
SHC1YER096W TFA1P36100 482 aa10.99□□□□□ -0.65
SHC1YER096W IPL1P38991 367 aa10.99□□□□□ -0.65
SHC1YER096W YAP3P38749 330 aa10.98□□□□□ -0.65
SHC1YER096W NOP7P53261 605 aaKnown RBP10.96□□□□□ -0.65
SHC1YER096W HAP1P0CE41 1502 aa10.95□□□□□ -0.66
SHC1YER096W PAF1P38351 445 aa10.93□□□□□ -0.66
SHC1YER096W RTC1Q08281 1341 aa10.93□□□□□ -0.66
SHC1YER096W URN1Q06525 465 aaKnown RBP10.91□□□□□ -0.66
SHC1YER096W USO1P25386 1790 aa10.91□□□□□ -0.66
SHC1YER096W TY3B-IQ7LHG5 1498 aaKnown RBP10.86□□□□□ -0.67
SHC1YER096W BCK1Q01389 1478 aa10.83□□□□□ -0.68
SHC1YER096W RAD9P14737 1309 aa10.81□□□□□ -0.68
SHC1YER096W TAF5P38129 798 aa10.8□□□□□ -0.68
SHC1YER096W MAK10Q02197 733 aa10.8□□□□□ -0.68
SHC1YER096W KRE5P22023 1365 aa10.76□□□□□ -0.69
SHC1YER096W YLR419WQ06698 1435 aaKnown RBP10.75□□□□□ -0.69
SHC1YER096W TY1B-NL2Q99337 1749 aaKnown RBP10.75□□□□□ -0.69
SHC1YER096W POL5P39985 1022 aaKnown RBP10.74□□□□□ -0.69
SHC1YER096W ORC1P54784 914 aaPredicted RBP10.74□□□□□ -0.69
SHC1YER096W AVT3P36062 692 aa10.74□□□□□ -0.69
SHC1YER096W CAB1Q04430 367 aa10.73□□□□□ -0.69
SHC1YER096W CFT1Q06632 1357 aaKnown RBP10.72□□□□□ -0.69
SHC1YER096W ESL2P36168 1195 aa10.72□□□□□ -0.69
SHC1YER096W ALD4P46367 519 aaKnown RBP10.72□□□□□ -0.69
SHC1YER096W MIF2P35201 549 aa10.71□□□□□ -0.69
SHC1YER096W KIP3P53086 805 aaKnown RBP10.68□□□□□ -0.7
SHC1YER096W TAF8Q03750 510 aa10.67□□□□□ -0.7
SHC1YER096W DIP2Q12220 943 aaPredicted RBP10.67□□□□□ -0.7
SHC1YER096W RIA1P53893 1110 aa10.66□□□□□ -0.7
SHC1YER096W MHP1P43638 1398 aa10.63□□□□□ -0.71
SHC1YER096W SPE2P21182 396 aa10.63□□□□□ -0.71
SHC1YER096W MRX12P47084 519 aa10.62□□□□□ -0.71
SHC1YER096W MLP1Q02455 1875 aaKnown RBP10.59□□□□□ -0.71
SHC1YER096W YNR029CP53729 429 aaKnown RBP10.58□□□□□ -0.72
SHC1YER096W YML133CQ03099 1374 aa10.56□□□□□ -0.72
SHC1YER096W YLL067CQ07888 1374 aa10.56□□□□□ -0.72
SHC1YER096W YLL066CQ99208 1374 aa10.56□□□□□ -0.72
SHC1YER096W YCK3P39962 524 aa10.55□□□□□ -0.72
SHC1YER096W TY4B-HP0C2J7 1802 aa10.54□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms