RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W SEC3P33332 1336 aaKnown RBP13.69□□□□□ -0.22
SNF1YDR477W YBT1P32386 1661 aa13.68□□□□□ -0.22
SNF1YDR477W VTH1P40438 1549 aa13.67□□□□□ -0.22
SNF1YDR477W VTH2P40890 1549 aa13.67□□□□□ -0.22
SNF1YDR477W DNF1P32660 1571 aa13.64□□□□□ -0.23
SNF1YDR477W SNT2P53127 1403 aa13.63□□□□□ -0.23
SNF1YDR477W ESC1Q03661 1658 aaKnown RBP13.61□□□□□ -0.23
SNF1YDR477W TY1B-JR2P47100 1755 aaKnown RBP13.57□□□□□ -0.24
SNF1YDR477W TY1B-ER2Q03619 1755 aa13.57□□□□□ -0.24
SNF1YDR477W TY1B-MR1Q04214 1755 aa13.57□□□□□ -0.24
SNF1YDR477W TY1B-MR2Q04670 1755 aaKnown RBP13.57□□□□□ -0.24
SNF1YDR477W TY1B-LR1Q12088 1755 aaKnown RBP13.57□□□□□ -0.24
SNF1YDR477W TY1B-NL1Q12112 1755 aa13.57□□□□□ -0.24
SNF1YDR477W TY1B-GR1Q12141 1755 aa13.57□□□□□ -0.24
SNF1YDR477W TY1B-BLQ12490 1755 aa13.57□□□□□ -0.24
SNF1YDR477W PRS1P32895 427 aaKnown RBP13.54□□□□□ -0.24
SNF1YDR477W NUP159P40477 1460 aa13.53□□□□□ -0.24
SNF1YDR477W RQC2Q12532 1038 aaKnown RBP13.52□□□□□ -0.24
SNF1YDR477W IRC20Q06554 1556 aa13.51□□□□□ -0.25
SNF1YDR477W CDC25P04821 1589 aa13.48□□□□□ -0.25
SNF1YDR477W CAT8P39113 1433 aa13.46□□□□□ -0.25
SNF1YDR477W GCN2P15442 1659 aa13.46□□□□□ -0.26
SNF1YDR477W LEU3P08638 886 aa13.44□□□□□ -0.26
SNF1YDR477W GEA2P39993 1459 aaKnown RBP13.44□□□□□ -0.26
SNF1YDR477W GDB1Q06625 1536 aa13.43□□□□□ -0.26
SNF1YDR477W BFR2Q06631 534 aaKnown RBP13.43□□□□□ -0.26
SNF1YDR477W SRB8P25648 1427 aa13.41□□□□□ -0.26
SNF1YDR477W ARO1P08566 1588 aaKnown RBP13.39□□□□□ -0.27
SNF1YDR477W YLR419WQ06698 1435 aaKnown RBP13.39□□□□□ -0.27
SNF1YDR477W PSD2P53037 1138 aaKnown RBP13.39□□□□□ -0.27
SNF1YDR477W NTE1Q04958 1679 aa13.36□□□□□ -0.27
SNF1YDR477W RPO21P04050 1733 aaKnown RBP13.35□□□□□ -0.27
SNF1YDR477W MHP1P43638 1398 aa13.33□□□□□ -0.27
SNF1YDR477W PDR5P33302 1511 aaKnown RBP13.32□□□□□ -0.28
SNF1YDR477W NOP7P53261 605 aaKnown RBP13.29□□□□□ -0.28
SNF1YDR477W RPA190P10964 1664 aaKnown RBP13.26□□□□□ -0.29
SNF1YDR477W CKB1P43639 278 aa13.26□□□□□ -0.29
SNF1YDR477W ORC1P54784 914 aaPredicted RBP13.25□□□□□ -0.29
SNF1YDR477W CFT1Q06632 1357 aaKnown RBP13.24□□□□□ -0.29
SNF1YDR477W PDR12Q02785 1511 aa13.22□□□□□ -0.29
SNF1YDR477W BUD3P25558 1636 aa13.22□□□□□ -0.29
SNF1YDR477W IQG1Q12280 1495 aa13.2□□□□□ -0.3
SNF1YDR477W TFA1P36100 482 aa13.19□□□□□ -0.3
SNF1YDR477W BUD21Q08492 214 aaPredicted RBP13.18□□□□□ -0.3
SNF1YDR477W TY3B-IQ7LHG5 1498 aaKnown RBP13.15□□□□□ -0.31
SNF1YDR477W SPO14P36126 1683 aa13.14□□□□□ -0.31
SNF1YDR477W YOR093CQ12275 1648 aa13.13□□□□□ -0.31
SNF1YDR477W YSP2Q06681 1438 aa13.11□□□□□ -0.31
SNF1YDR477W NST1P53935 1240 aa13.11□□□□□ -0.31
SNF1YDR477W MMS1Q06211 1407 aa13.11□□□□□ -0.31
SNF1YDR477W YPR148CQ06523 435 aa13.1□□□□□ -0.31
SNF1YDR477W NUP157P40064 1391 aaKnown RBP13.09□□□□□ -0.31
SNF1YDR477W PDS5Q04264 1277 aa13.08□□□□□ -0.32
SNF1YDR477W FUN12P39730 1002 aaKnown RBP13.07□□□□□ -0.32
SNF1YDR477W LTE1P07866 1435 aa13.07□□□□□ -0.32
SNF1YDR477W PAF1P38351 445 aa13.07□□□□□ -0.32
SNF1YDR477W MET10P39692 1035 aa13.01□□□□□ -0.33
SNF1YDR477W IME2P32581 645 aa13□□□□□ -0.33
SNF1YDR477W YRF1-1P0CX20 1796 aa12.99□□□□□ -0.33
SNF1YDR477W YRF1-5P0CX21 1796 aa12.99□□□□□ -0.33
SNF1YDR477W YRF1-8P0CX22 1796 aa12.99□□□□□ -0.33
SNF1YDR477W CHC1P22137 1653 aaKnown RBP12.99□□□□□ -0.33
SNF1YDR477W RPC31P17890 251 aa12.97□□□□□ -0.33
SNF1YDR477W PDR11P40550 1411 aa12.95□□□□□ -0.34
SNF1YDR477W RAV1P47104 1357 aa12.95□□□□□ -0.34
SNF1YDR477W CAB3P36076 571 aa12.94□□□□□ -0.34
SNF1YDR477W TAF5P38129 798 aa12.94□□□□□ -0.34
SNF1YDR477W OPY1P38271 328 aa12.94□□□□□ -0.34
SNF1YDR477W RTC1Q08281 1341 aa12.93□□□□□ -0.34
SNF1YDR477W DOP1Q03921 1698 aa12.93□□□□□ -0.34
SNF1YDR477W KIP3P53086 805 aaKnown RBP12.92□□□□□ -0.34
SNF1YDR477W EBP2P36049 427 aaKnown RBP12.9□□□□□ -0.35
SNF1YDR477W YFR016CP43597 1233 aaKnown RBP12.89□□□□□ -0.35
SNF1YDR477W DRS2P39524 1355 aa12.87□□□□□ -0.35
SNF1YDR477W CDC45Q08032 650 aa12.87□□□□□ -0.35
SNF1YDR477W RVB2Q12464 471 aaKnown RBP12.87□□□□□ -0.35
SNF1YDR477W VMR1P38735 1592 aa12.87□□□□□ -0.35
SNF1YDR477W NUP192P47054 1683 aa12.86□□□□□ -0.35
SNF1YDR477W SEC7P11075 2009 aaKnown RBP12.86□□□□□ -0.35
SNF1YDR477W BNR1P40450 1375 aa12.86□□□□□ -0.35
SNF1YDR477W CLC1P17891 233 aa12.86□□□□□ -0.35
SNF1YDR477W VPS27P40343 622 aaKnown RBP12.86□□□□□ -0.35
SNF1YDR477W RPP0P05317 312 aaKnown RBP12.83□□□□□ -0.36
SNF1YDR477W DNF2Q12675 1612 aa12.82□□□□□ -0.36
SNF1YDR477W ESL2P36168 1195 aa12.8□□□□□ -0.36
SNF1YDR477W MLP1Q02455 1875 aaKnown RBP12.77□□□□□ -0.37
SNF1YDR477W FPR3P38911 411 aaKnown RBP12.76□□□□□ -0.37
SNF1YDR477W IML1P47170 1584 aa12.76□□□□□ -0.37
SNF1YDR477W YDL144CQ07589 356 aa12.75□□□□□ -0.37
SNF1YDR477W RTG3P38165 486 aa12.74□□□□□ -0.37
SNF1YDR477W EAF7P53911 425 aaKnown RBP12.74□□□□□ -0.37
SNF1YDR477W SPE2P21182 396 aa12.73□□□□□ -0.37
SNF1YDR477W NUP188P52593 1655 aaKnown RBP12.73□□□□□ -0.37
SNF1YDR477W SUI2P20459 304 aaKnown RBP12.72□□□□□ -0.37
SNF1YDR477W TRK1P12685 1235 aa12.7□□□□□ -0.38
SNF1YDR477W SNF2P22082 1703 aa12.69□□□□□ -0.38
SNF1YDR477W ABP1P15891 592 aaKnown RBP12.68□□□□□ -0.38
SNF1YDR477W YIR014WP40570 242 aa12.68□□□□□ -0.38
SNF1YDR477W YEF3P16521 1044 aaKnown RBP12.68□□□□□ -0.38
SNF1YDR477W SNF7P39929 240 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms