RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	YOL036W	Q08206	761 aa		12.47	□□□□□ -0.41
URH1	YDR400W	NUP42	P49686	430 aa	Known RBP	12.46	□□□□□ -0.41
URH1	YDR400W	YGR273C	P53329	174 aa		12.46	□□□□□ -0.41
URH1	YDR400W	YDR090C	Q03193	310 aa		12.46	□□□□□ -0.41
URH1	YDR400W	DIT2	P21595	489 aa		12.45	□□□□□ -0.42
URH1	YDR400W	SOL3	P38858	249 aa		12.45	□□□□□ -0.42
URH1	YDR400W	YLR326W	Q06170	240 aa	Known RBP	12.45	□□□□□ -0.42
URH1	YDR400W	SET4	P42948	560 aa		12.44	□□□□□ -0.42
URH1	YDR400W	GLC3	P32775	704 aa		12.43	□□□□□ -0.42
URH1	YDR400W	DCW1	P36091	449 aa		12.43	□□□□□ -0.42
URH1	YDR400W	DMA2	P53924	522 aa		12.39	□□□□□ -0.43
URH1	YDR400W	KIN1	P13185	1064 aa		12.37	□□□□□ -0.43
URH1	YDR400W	WSC3	Q12215	556 aa		12.37	□□□□□ -0.43
URH1	YDR400W	KEX1	P09620	729 aa		12.35	□□□□□ -0.43
URH1	YDR400W	ABP1	P15891	592 aa	Known RBP	12.35	□□□□□ -0.43
URH1	YDR400W	NST1	P53935	1240 aa		12.35	□□□□□ -0.43
URH1	YDR400W	HTA1	P04911	132 aa	Known RBP	12.32	□□□□□ -0.44
URH1	YDR400W	HTA2	P04912	132 aa		12.32	□□□□□ -0.44
URH1	YDR400W	RAD54	P32863	898 aa		12.32	□□□□□ -0.44
URH1	YDR400W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	12.32	□□□□□ -0.44	not detected
URH1	YDR400W	KIC1	P38692	1080 aa		12.32	□□□□□ -0.44
URH1	YDR400W	AIM7	Q12156	149 aa		12.32	□□□□□ -0.44
URH1	YDR400W	MSB4	Q12317	492 aa		12.32	□□□□□ -0.44
URH1	YDR400W	YBL029C-A	Q3E756	94 aa		12.26	□□□□□ -0.45
URH1	YDR400W	ILV3	P39522	585 aa	Known RBP	12.25	□□□□□ -0.45
URH1	YDR400W	ATF2	P53296	535 aa		12.24	□□□□□ -0.45
URH1	YDR400W	MPH3	P0CE00	602 aa		12.22	□□□□□ -0.45
URH1	YDR400W	AI4	P03878	556 aa		12.21	□□□□□ -0.45
URH1	YDR400W	YEL023C	P39992	682 aa		12.21	□□□□□ -0.45
URH1	YDR400W	VNX1	P42839	908 aa		12.19	□□□□□ -0.46
URH1	YDR400W	TRP5	P00931	707 aa	Known RBP	12.18	□□□□□ -0.46
URH1	YDR400W	EAP1	P36041	632 aa	Known RBP	12.17	□□□□□ -0.46
URH1	YDR400W	ORC6	P38826	435 aa		12.16	□□□□□ -0.46
URH1	YDR400W	PSE1	P32337	1089 aa	Known RBP	12.15	□□□□□ -0.46
URH1	YDR400W	DAN4	P47179	1161 aa		12.13	□□□□□ -0.47
URH1	YDR400W	GUA1	P38625	525 aa	Known RBP	12.12	□□□□□ -0.47
URH1	YDR400W	PTC4	P38089	393 aa		12.1	□□□□□ -0.47
URH1	YDR400W	SLI15	P38283	698 aa		12.1	□□□□□ -0.47
URH1	YDR400W	TIF11	P38912	153 aa	Known RBP	12.1	□□□□□ -0.47
URH1	YDR400W	ULI1	P43604	169 aa		12.1	□□□□□ -0.47
URH1	YDR400W	SGS1	P35187	1447 aa		12.1	□□□□□ -0.47
URH1	YDR400W	SPP1	Q03012	353 aa		12.09	□□□□□ -0.47
URH1	YDR400W	UBP9	P39967	754 aa		12.06	□□□□□ -0.48
URH1	YDR400W	JIP4	Q03361	876 aa		12.04	□□□□□ -0.48
URH1	YDR400W	RGR1	P19263	1082 aa		12.03	□□□□□ -0.48
URH1	YDR400W	IOC2	Q12072	812 aa		12.02	□□□□□ -0.49
URH1	YDR400W	CDC73	Q06697	393 aa		12	□□□□□ -0.49
URH1	YDR400W	GAP1	P19145	602 aa	Predicted RBP	11.99	□□□□□ -0.49
URH1	YDR400W	MVP1	P40959	511 aa	Known RBP	11.99	□□□□□ -0.49
URH1	YDR400W	TEA1	P47988	759 aa		11.99	□□□□□ -0.49
URH1	YDR400W	YNL035C	P53962	389 aa	Known RBP	11.95	□□□□□ -0.5
URH1	YDR400W	HPC2	Q01448	625 aa		11.95	□□□□□ -0.5
URH1	YDR400W	RPP1B	P10622	106 aa	Known RBP	11.94	□□□□□ -0.5
URH1	YDR400W	MID1	P41821	548 aa		11.94	□□□□□ -0.5
URH1	YDR400W	HGH1	P48362	394 aa	Known RBP	11.94	□□□□□ -0.5
URH1	YDR400W	CSC1	Q06538	782 aa		11.94	□□□□□ -0.5
URH1	YDR400W	PML39	Q03760	334 aa		11.92	□□□□□ -0.5
URH1	YDR400W	LDB19	Q12502	818 aa		11.92	□□□□□ -0.5
URH1	YDR400W	CSN12	P47130	423 aa		11.91	□□□□□ -0.5
URH1	YDR400W	TFB3	Q03290	321 aa		11.91	□□□□□ -0.5
URH1	YDR400W	RTG1	P32607	177 aa		11.9	□□□□□ -0.5
URH1	YDR400W	CLB5	P30283	435 aa		11.89	□□□□□ -0.51
URH1	YDR400W	YPR109W	Q06104	294 aa		11.89	□□□□□ -0.51
URH1	YDR400W	RLF2	Q12495	606 aa		11.89	□□□□□ -0.51
URH1	YDR400W	SSA2	P10592	639 aa	Known RBP	11.86	□□□□□ -0.51
URH1	YDR400W	KTR1	P27810	393 aa	Known RBP	11.86	□□□□□ -0.51
URH1	YDR400W	TFB4	Q12004	338 aa		11.86	□□□□□ -0.51
URH1	YDR400W	PEX21	P50091	288 aa		11.85	□□□□□ -0.51
URH1	YDR400W	NIS1	P53939	407 aa		11.85	□□□□□ -0.51
URH1	YDR400W	DPL1	Q05567	589 aa		11.85	□□□□□ -0.51
URH1	YDR400W	MPC54	Q08550	464 aa		11.85	□□□□□ -0.51
URH1	YDR400W	TYW1	Q08960	810 aa	Known RBP	11.85	□□□□□ -0.51
URH1	YDR400W	SEC61	P32915	480 aa		11.83	□□□□□ -0.52
URH1	YDR400W	BRL1	P38770	471 aa		11.83	□□□□□ -0.52
URH1	YDR400W	INO80	P53115	1489 aa		11.83	□□□□□ -0.52
URH1	YDR400W	TUM1	Q08686	304 aa	Known RBP	11.82	□□□□□ -0.52
URH1	YDR400W	PKC1	P24583	1151 aa		11.81	□□□□□ -0.52
URH1	YDR400W	FPK1	P53739	893 aa		11.8	□□□□□ -0.52
URH1	YDR400W	PEX29	Q03370	554 aa		11.78	□□□□□ -0.52
URH1	YDR400W	YMR196W	Q04336	1088 aa		11.78	□□□□□ -0.52
URH1	YDR400W	YRR1	Q12172	810 aa		11.76	□□□□□ -0.53
URH1	YDR400W	HST2	P53686	357 aa		11.75	□□□□□ -0.53
URH1	YDR400W	NCR1	Q12200	1170 aa		11.75	□□□□□ -0.53
URH1	YDR400W	SCJ1	P25303	377 aa		11.74	□□□□□ -0.53
URH1	YDR400W	GLN1	P32288	370 aa	Known RBP	11.74	□□□□□ -0.53
URH1	YDR400W	BUD31	P25337	157 aa	Predicted RBP	11.73	□□□□□ -0.53
URH1	YDR400W	TFG1	P41895	735 aa	Predicted RBP	11.73	□□□□□ -0.53
URH1	YDR400W	NMA111	P53920	997 aa		11.73	□□□□□ -0.53
URH1	YDR400W	ISU2	Q12056	156 aa		11.73	□□□□□ -0.53
URH1	YDR400W	YDL129W	Q07555	291 aa		11.72	□□□□□ -0.53
URH1	YDR400W	MMP1	Q12372	583 aa		11.71	□□□□□ -0.53
URH1	YDR400W	SIT4	P20604	311 aa		11.7	□□□□□ -0.54
URH1	YDR400W	ESS1	P22696	170 aa		11.7	□□□□□ -0.54
URH1	YDR400W	FKH1	P40466	484 aa		11.67	□□□□□ -0.54
URH1	YDR400W	PKH3	Q03306	898 aa	Predicted RBP	11.67	□□□□□ -0.54
URH1	YDR400W	TCB3	Q03640	1545 aa	Known RBP	11.65	□□□□□ -0.55
URH1	YDR400W	YJU3	P28321	313 aa		11.64	□□□□□ -0.55
URH1	YDR400W	YJL007C	P47080	104 aa		11.64	□□□□□ -0.55
URH1	YDR400W	RAD59	Q12223	238 aa		11.63	□□□□□ -0.55
URH1	YDR400W	SAP30	P38429	201 aa		11.62	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms