RNA–Protein interactions for RNA: YDR258C

HSP78, Transcript of Oligomeric mitochondrial matrix chaperone, yeastyeast

Gene HSP78, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP78YDR258C VTH1P40438 1549 aa8.31□□□□□ -1.08
HSP78YDR258C VTH2P40890 1549 aa8.31□□□□□ -1.08
HSP78YDR258C TSC11P40061 1430 aa8.3□□□□□ -1.08
HSP78YDR258C CDC25P04821 1589 aa8.3□□□□□ -1.08
HSP78YDR258C PAN1P32521 1480 aa8.27□□□□□ -1.09
HSP78YDR258C IFH1P39520 1085 aa8.27□□□□□ -1.09
HSP78YDR258C RQC2Q12532 1038 aaKnown RBP8.26□□□□□ -1.09
HSP78YDR258C SNT2P53127 1403 aa8.25□□□□□ -1.09
HSP78YDR258C SSM4P40318 1319 aa8.24□□□□□ -1.09
HSP78YDR258C TY1B-JR2P47100 1755 aaKnown RBP8.22□□□□□ -1.09
HSP78YDR258C TY1B-ER2Q03619 1755 aa8.22□□□□□ -1.09
HSP78YDR258C TY1B-MR1Q04214 1755 aa8.22□□□□□ -1.09
HSP78YDR258C TY1B-MR2Q04670 1755 aaKnown RBP8.22□□□□□ -1.09
HSP78YDR258C TY1B-LR1Q12088 1755 aaKnown RBP8.22□□□□□ -1.09
HSP78YDR258C TY1B-NL1Q12112 1755 aa8.22□□□□□ -1.09
HSP78YDR258C TY1B-GR1Q12141 1755 aa8.22□□□□□ -1.09
HSP78YDR258C TY1B-BLQ12490 1755 aa8.22□□□□□ -1.09
HSP78YDR258C TY3B-GQ99315 1547 aa8.21□□□□□ -1.1
HSP78YDR258C ESC1Q03661 1658 aaKnown RBP8.19□□□□□ -1.1
HSP78YDR258C GEA2P39993 1459 aaKnown RBP8.17□□□□□ -1.1
HSP78YDR258C RPL17AP05740 184 aaKnown RBP8.17□□□□□ -1.1
HSP78YDR258C RPL17BP46990 184 aaKnown RBP8.17□□□□□ -1.1
HSP78YDR258C NTE1Q04958 1679 aa8.16□□□□□ -1.1
HSP78YDR258C CAT8P39113 1433 aa8.16□□□□□ -1.1
HSP78YDR258C YBT1P32386 1661 aa8.15□□□□□ -1.1
HSP78YDR258C IRC20Q06554 1556 aa8.15□□□□□ -1.1
HSP78YDR258C RPO21P04050 1733 aaKnown RBP8.14□□□□□ -1.11
HSP78YDR258C RPA190P10964 1664 aaKnown RBP8.14□□□□□ -1.11
HSP78YDR258C VPS15P22219 1454 aa8.14□□□□□ -1.11
HSP78YDR258C RTT106P40161 455 aa8.13□□□□□ -1.11
HSP78YDR258C REB1P21538 810 aa8.12□□□□□ -1.11
HSP78YDR258C DNF1P32660 1571 aa8.11□□□□□ -1.11
HSP78YDR258C MRPL32P25348 183 aa8.09□□□□□ -1.11
HSP78YDR258C NUP159P40477 1460 aa8.06□□□□□ -1.12
HSP78YDR258C SRB8P25648 1427 aa8.05□□□□□ -1.12
HSP78YDR258C PDR10P51533 1564 aa8.04□□□□□ -1.12
HSP78YDR258C PDR12Q02785 1511 aa8.04□□□□□ -1.12
HSP78YDR258C ARO1P08566 1588 aaKnown RBP8.03□□□□□ -1.12
HSP78YDR258C GDB1Q06625 1536 aa8.02□□□□□ -1.13
HSP78YDR258C POL5P39985 1022 aaKnown RBP8□□□□□ -1.13
HSP78YDR258C MET10P39692 1035 aa8□□□□□ -1.13
HSP78YDR258C GCN2P15442 1659 aa8□□□□□ -1.13
HSP78YDR258C SPO14P36126 1683 aa7.98□□□□□ -1.13
HSP78YDR258C NUP157P40064 1391 aaKnown RBP7.96□□□□□ -1.13
HSP78YDR258C MET5P47169 1442 aa7.95□□□□□ -1.14
HSP78YDR258C MMS1Q06211 1407 aa7.95□□□□□ -1.14
HSP78YDR258C YRF1-1P0CX20 1796 aa7.95□□□□□ -1.14
HSP78YDR258C YRF1-5P0CX21 1796 aa7.95□□□□□ -1.14
HSP78YDR258C YRF1-8P0CX22 1796 aa7.95□□□□□ -1.14
HSP78YDR258C CKB1P43639 278 aa7.95□□□□□ -1.14
HSP78YDR258C IQG1Q12280 1495 aa7.94□□□□□ -1.14
HSP78YDR258C NSR1P27476 414 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
HSP78YDR258C BUD21Q08492 214 aaPredicted RBP7.92□□□□□ -1.14
HSP78YDR258C YSP2Q06681 1438 aa7.91□□□□□ -1.14
HSP78YDR258C PDR5P33302 1511 aaKnown RBP7.9□□□□□ -1.14
HSP78YDR258C SEC3P33332 1336 aaKnown RBP7.9□□□□□ -1.15
HSP78YDR258C BUD3P25558 1636 aa7.89□□□□□ -1.15
HSP78YDR258C NOP7P53261 605 aaKnown RBP7.88□□□□□ -1.15
HSP78YDR258C ENP1P38333 483 aaKnown RBP7.87□□□□□ -1.15
HSP78YDR258C SPT21P35209 758 aa7.84□□□□□ -1.15
HSP78YDR258C YOR093CQ12275 1648 aa7.83□□□□□ -1.16
HSP78YDR258C PAF1P38351 445 aa7.83□□□□□ -1.16
HSP78YDR258C SEC7P11075 2009 aaKnown RBP7.82□□□□□ -1.16
HSP78YDR258C BNR1P40450 1375 aa7.82□□□□□ -1.16
HSP78YDR258C NOP2P40991 618 aaKnown RBP7.81□□□□□ -1.16
HSP78YDR258C CHC1P22137 1653 aaKnown RBP7.8□□□□□ -1.16
HSP78YDR258C SPT7P35177 1332 aa7.79□□□□□ -1.16
HSP78YDR258C LTE1P07866 1435 aa7.78□□□□□ -1.16
HSP78YDR258C MHP1P43638 1398 aa7.77□□□□□ -1.17
HSP78YDR258C TRM3Q07527 1436 aa7.76□□□□□ -1.17
HSP78YDR258C RAV1P47104 1357 aa7.75□□□□□ -1.17
HSP78YDR258C DOP1Q03921 1698 aa7.74□□□□□ -1.17
HSP78YDR258C TY3B-IQ7LHG5 1498 aaKnown RBP7.74□□□□□ -1.17
HSP78YDR258C YKR023WP36119 530 aaKnown RBP7.74□□□□□ -1.17
HSP78YDR258C CDC27P38042 758 aa7.74□□□□□ -1.17
HSP78YDR258C RTC1Q08281 1341 aa7.73□□□□□ -1.17
HSP78YDR258C YGL015CP33199 130 aa7.72□□□□□ -1.17
HSP78YDR258C VMR1P38735 1592 aa7.7□□□□□ -1.18
HSP78YDR258C NUP188P52593 1655 aaKnown RBP7.7□□□□□ -1.18
HSP78YDR258C IML1P47170 1584 aa7.69□□□□□ -1.18
HSP78YDR258C PDR11P40550 1411 aa7.68□□□□□ -1.18
HSP78YDR258C DRS2P39524 1355 aa7.67□□□□□ -1.18
HSP78YDR258C SCT1P32784 759 aa7.67□□□□□ -1.18
HSP78YDR258C YLR419WQ06698 1435 aaKnown RBP7.66□□□□□ -1.18
HSP78YDR258C ESL2P36168 1195 aa7.65□□□□□ -1.18
HSP78YDR258C ORC1P54784 914 aaPredicted RBP7.64□□□□□ -1.19
HSP78YDR258C DNF2Q12675 1612 aa7.64□□□□□ -1.19
HSP78YDR258C PSD2P53037 1138 aaKnown RBP7.64□□□□□ -1.19
HSP78YDR258C TAF5P38129 798 aa7.63□□□□□ -1.19
HSP78YDR258C PRS1P32895 427 aaKnown RBP7.63□□□□□ -1.19
HSP78YDR258C PDS5Q04264 1277 aa7.61□□□□□ -1.19
HSP78YDR258C NUP192P47054 1683 aa7.61□□□□□ -1.19
HSP78YDR258C LEU3P08638 886 aa7.6□□□□□ -1.19
HSP78YDR258C KIP3P53086 805 aaKnown RBP7.6□□□□□ -1.19
HSP78YDR258C HOP09932 586 aa7.58□□□□□ -1.2
HSP78YDR258C RIM101P33400 625 aa7.58□□□□□ -1.2
HSP78YDR258C URN1Q06525 465 aaKnown RBP7.58□□□□□ -1.2
HSP78YDR258C TFC8Q12308 588 aa7.57□□□□□ -1.2
HSP78YDR258C DCD1P06773 312 aa7.56□□□□□ -1.2
HSP78YDR258C IPL1P38991 367 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms