RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM4YDR257C NUP42P49686 430 aaKnown RBP9.66□□□□□ -0.86
RKM4YDR257C YGR273CP53329 174 aa9.66□□□□□ -0.86
RKM4YDR257C YOL036WQ08206 761 aa9.66□□□□□ -0.86
RKM4YDR257C UBP14P38237 781 aaKnown RBP9.66□□□□□ -0.86
RKM4YDR257C YLR326WQ06170 240 aaKnown RBP9.64□□□□□ -0.87
RKM4YDR257C DIT2P21595 489 aa9.63□□□□□ -0.87
RKM4YDR257C GLC3P32775 704 aa9.63□□□□□ -0.87
RKM4YDR257C KIC1P38692 1080 aa9.63□□□□□ -0.87
RKM4YDR257C YDR090CQ03193 310 aa9.63□□□□□ -0.87
RKM4YDR257C AIM7Q12156 149 aa9.63□□□□□ -0.87
RKM4YDR257C KIN1P13185 1064 aa9.62□□□□□ -0.87
RKM4YDR257C DCW1P36091 449 aa9.62□□□□□ -0.87
RKM4YDR257C SET4P42948 560 aa9.62□□□□□ -0.87
RKM4YDR257C MSB4Q12317 492 aa9.62□□□□□ -0.87
RKM4YDR257C SOL3P38858 249 aa9.6□□□□□ -0.87
RKM4YDR257C HTA1P04911 132 aaKnown RBP9.59□□□□□ -0.87
RKM4YDR257C HTA2P04912 132 aa9.59□□□□□ -0.87
RKM4YDR257C DMA2P53924 522 aa9.59□□□□□ -0.87
RKM4YDR257C RAD54P32863 898 aa9.59□□□□□ -0.87
RKM4YDR257C KEX1P09620 729 aa9.58□□□□□ -0.88
RKM4YDR257C WSC3Q12215 556 aa9.56□□□□□ -0.88
RKM4YDR257C ATF2P53296 535 aa9.55□□□□□ -0.88
RKM4YDR257C PCS60P38137 543 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
RKM4YDR257C NST1P53935 1240 aa9.53□□□□□ -0.88
RKM4YDR257C EAP1P36041 632 aaKnown RBP9.53□□□□□ -0.88
RKM4YDR257C AI4P03878 556 aa9.51□□□□□ -0.89
RKM4YDR257C MPH3P0CE00 602 aa9.5□□□□□ -0.89
RKM4YDR257C PSE1P32337 1089 aaKnown RBP9.48□□□□□ -0.89
RKM4YDR257C YEL023CP39992 682 aa9.47□□□□□ -0.89
RKM4YDR257C YBL029C-AQ3E756 94 aa9.46□□□□□ -0.9
RKM4YDR257C HGH1P48362 394 aaKnown RBP9.45□□□□□ -0.9
RKM4YDR257C VNX1P42839 908 aa9.44□□□□□ -0.9
RKM4YDR257C TRP5P00931 707 aaKnown RBP9.43□□□□□ -0.9
RKM4YDR257C ILV3P39522 585 aaKnown RBP9.43□□□□□ -0.9
RKM4YDR257C UBP9P39967 754 aa9.43□□□□□ -0.9
RKM4YDR257C PTC4P38089 393 aa9.42□□□□□ -0.9
RKM4YDR257C ORC6P38826 435 aa9.42□□□□□ -0.9
RKM4YDR257C DAN4P47179 1161 aa9.42□□□□□ -0.9
RKM4YDR257C TIF11P38912 153 aaKnown RBP9.4□□□□□ -0.9
RKM4YDR257C JIP4Q03361 876 aa9.4□□□□□ -0.9
RKM4YDR257C RPP1BP10622 106 aaKnown RBP9.4□□□□□ -0.91
RKM4YDR257C ULI1P43604 169 aa9.4□□□□□ -0.91
RKM4YDR257C GUA1P38625 525 aaKnown RBP9.39□□□□□ -0.91
RKM4YDR257C SPP1Q03012 353 aa9.38□□□□□ -0.91
RKM4YDR257C SLI15P38283 698 aa9.37□□□□□ -0.91
RKM4YDR257C TEA1P47988 759 aa9.34□□□□□ -0.91
RKM4YDR257C HPC2Q01448 625 aa9.34□□□□□ -0.91
RKM4YDR257C RGR1P19263 1082 aa9.34□□□□□ -0.91
RKM4YDR257C CLB5P30283 435 aa9.33□□□□□ -0.92
RKM4YDR257C CSC1Q06538 782 aa9.33□□□□□ -0.92
RKM4YDR257C IOC2Q12072 812 aa9.32□□□□□ -0.92
RKM4YDR257C MVP1P40959 511 aaKnown RBP9.31□□□□□ -0.92
RKM4YDR257C RLF2Q12495 606 aa9.31□□□□□ -0.92
RKM4YDR257C SSA2P10592 639 aaKnown RBP9.3□□□□□ -0.92
RKM4YDR257C GAP1P19145 602 aaPredicted RBP9.3□□□□□ -0.92
RKM4YDR257C YNL035CP53962 389 aaKnown RBP9.3□□□□□ -0.92
RKM4YDR257C CSN12P47130 423 aa9.28□□□□□ -0.92
RKM4YDR257C CDC73Q06697 393 aa9.27□□□□□ -0.93
RKM4YDR257C TFB4Q12004 338 aa9.27□□□□□ -0.93
RKM4YDR257C BRL1P38770 471 aa9.25□□□□□ -0.93
RKM4YDR257C PEX21P50091 288 aa9.25□□□□□ -0.93
RKM4YDR257C TFB3Q03290 321 aa9.24□□□□□ -0.93
RKM4YDR257C PML39Q03760 334 aa9.24□□□□□ -0.93
RKM4YDR257C YPR109WQ06104 294 aa9.24□□□□□ -0.93
RKM4YDR257C LDB19Q12502 818 aa9.24□□□□□ -0.93
RKM4YDR257C RTG1P32607 177 aa9.22□□□□□ -0.93
RKM4YDR257C SEC61P32915 480 aa9.22□□□□□ -0.93
RKM4YDR257C DPL1Q05567 589 aa9.21□□□□□ -0.93
RKM4YDR257C MID1P41821 548 aa9.21□□□□□ -0.94
RKM4YDR257C YMR196WQ04336 1088 aa9.2□□□□□ -0.94
RKM4YDR257C TFG1P41895 735 aaPredicted RBP9.19□□□□□ -0.94
RKM4YDR257C NIS1P53939 407 aa9.19□□□□□ -0.94
RKM4YDR257C PEX29Q03370 554 aa9.19□□□□□ -0.94
RKM4YDR257C MPC54Q08550 464 aa9.19□□□□□ -0.94
RKM4YDR257C TUM1Q08686 304 aaKnown RBP9.17□□□□□ -0.94
RKM4YDR257C FPK1P53739 893 aa9.16□□□□□ -0.94
RKM4YDR257C KTR1P27810 393 aaKnown RBP9.15□□□□□ -0.94
RKM4YDR257C GLN1P32288 370 aaKnown RBP9.15□□□□□ -0.94
RKM4YDR257C HST2P53686 357 aa9.15□□□□□ -0.94
RKM4YDR257C TYW1Q08960 810 aaKnown RBP9.15□□□□□ -0.95
RKM4YDR257C ISU2Q12056 156 aa9.15□□□□□ -0.95
RKM4YDR257C NCR1Q12200 1170 aa9.14□□□□□ -0.95
RKM4YDR257C YDL129WQ07555 291 aa9.13□□□□□ -0.95
RKM4YDR257C PKC1P24583 1151 aa9.12□□□□□ -0.95
RKM4YDR257C YRR1Q12172 810 aa9.12□□□□□ -0.95
RKM4YDR257C MMP1Q12372 583 aa9.12□□□□□ -0.95
RKM4YDR257C SIT4P20604 311 aa9.11□□□□□ -0.95
RKM4YDR257C NMA111P53920 997 aa9.11□□□□□ -0.95
RKM4YDR257C BUD31P25337 157 aaPredicted RBP9.08□□□□□ -0.96
RKM4YDR257C ESS1P22696 170 aa9.07□□□□□ -0.96
RKM4YDR257C PKH3Q03306 898 aaPredicted RBP9.07□□□□□ -0.96
RKM4YDR257C SCJ1P25303 377 aa9.06□□□□□ -0.96
RKM4YDR257C YJL007CP47080 104 aa9.05□□□□□ -0.96
RKM4YDR257C YBL036CP38197 257 aa9.04□□□□□ -0.96
RKM4YDR257C FKH1P40466 484 aa9.04□□□□□ -0.96
RKM4YDR257C RTF1P53064 558 aa9.03□□□□□ -0.96
RKM4YDR257C RAD59Q12223 238 aa9.03□□□□□ -0.96
RKM4YDR257C BIM1P40013 344 aa9.02□□□□□ -0.96
RKM4YDR257C YNL115CP53925 644 aa9.02□□□□□ -0.96
RKM4YDR257C HAP5Q02516 242 aa9.02□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms