RNA–Protein interactions for RNA: YDR163W

CWC15, Transcript of Non-essential protein involved in pre-mRNA splicing, yeastyeast

Gene CWC15, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC15YDR163W TY1B-ORQ92393 1755 aa13.28□□□□□ -0.28
CWC15YDR163W BFR2Q06631 534 aaKnown RBP13.28□□□□□ -0.28
CWC15YDR163W TSC11P40061 1430 aa13.27□□□□□ -0.29
CWC15YDR163W VTH1P40438 1549 aa13.26□□□□□ -0.29
CWC15YDR163W VTH2P40890 1549 aa13.26□□□□□ -0.29
CWC15YDR163W GEA1P47102 1408 aaPredicted RBP13.26□□□□□ -0.29
CWC15YDR163W ULS1Q08562 1619 aa13.26□□□□□ -0.29
CWC15YDR163W CDC25P04821 1589 aa13.24□□□□□ -0.29
CWC15YDR163W PAN1P32521 1480 aa13.2□□□□□ -0.3
CWC15YDR163W SNT2P53127 1403 aa13.2□□□□□ -0.3
CWC15YDR163W SSM4P40318 1319 aa13.13□□□□□ -0.31
CWC15YDR163W IFH1P39520 1085 aa13.11□□□□□ -0.31
CWC15YDR163W TY1B-JR2P47100 1755 aaKnown RBP13.09□□□□□ -0.31
CWC15YDR163W TY1B-ER2Q03619 1755 aa13.09□□□□□ -0.31
CWC15YDR163W TY1B-MR1Q04214 1755 aa13.09□□□□□ -0.31
CWC15YDR163W TY1B-MR2Q04670 1755 aaKnown RBP13.09□□□□□ -0.31
CWC15YDR163W TY1B-LR1Q12088 1755 aaKnown RBP13.09□□□□□ -0.31
CWC15YDR163W TY1B-NL1Q12112 1755 aa13.09□□□□□ -0.31
CWC15YDR163W TY1B-GR1Q12141 1755 aa13.09□□□□□ -0.31
CWC15YDR163W TY1B-BLQ12490 1755 aa13.09□□□□□ -0.31
CWC15YDR163W TY3B-GQ99315 1547 aa13.09□□□□□ -0.31
CWC15YDR163W RQC2Q12532 1038 aaKnown RBP13.09□□□□□ -0.31
CWC15YDR163W YGL015CP33199 130 aa13.08□□□□□ -0.32
CWC15YDR163W GEA2P39993 1459 aaKnown RBP13.05□□□□□ -0.32
CWC15YDR163W ESC1Q03661 1658 aaKnown RBP13.03□□□□□ -0.32
CWC15YDR163W CAT8P39113 1433 aa13.03□□□□□ -0.32
CWC15YDR163W IRC20Q06554 1556 aa13.02□□□□□ -0.33
CWC15YDR163W NTE1Q04958 1679 aa13□□□□□ -0.33
CWC15YDR163W YBT1P32386 1661 aa12.99□□□□□ -0.33
CWC15YDR163W RPA190P10964 1664 aaKnown RBP12.98□□□□□ -0.33
CWC15YDR163W RPO21P04050 1733 aaKnown RBP12.97□□□□□ -0.33
CWC15YDR163W VPS15P22219 1454 aa12.97□□□□□ -0.33
CWC15YDR163W DNF1P32660 1571 aa12.94□□□□□ -0.34
CWC15YDR163W RTT106P40161 455 aa12.93□□□□□ -0.34
CWC15YDR163W PDR10P51533 1564 aa12.88□□□□□ -0.35
CWC15YDR163W NUP159P40477 1460 aa12.86□□□□□ -0.35
CWC15YDR163W CDC27P38042 758 aa12.86□□□□□ -0.35
CWC15YDR163W PDR12Q02785 1511 aa12.86□□□□□ -0.35
CWC15YDR163W SRB8P25648 1427 aa12.85□□□□□ -0.35
CWC15YDR163W SPT21P35209 758 aa12.82□□□□□ -0.36
CWC15YDR163W ARO1P08566 1588 aaKnown RBP12.81□□□□□ -0.36
CWC15YDR163W GDB1Q06625 1536 aa12.78□□□□□ -0.36
CWC15YDR163W YKR023WP36119 530 aaKnown RBP12.75□□□□□ -0.37
CWC15YDR163W MET10P39692 1035 aa12.75□□□□□ -0.37
CWC15YDR163W GCN2P15442 1659 aa12.74□□□□□ -0.37
CWC15YDR163W MET5P47169 1442 aa12.73□□□□□ -0.37
CWC15YDR163W POL5P39985 1022 aaKnown RBP12.72□□□□□ -0.37
CWC15YDR163W MMS1Q06211 1407 aa12.71□□□□□ -0.37
CWC15YDR163W SPO14P36126 1683 aa12.71□□□□□ -0.37
CWC15YDR163W IQG1Q12280 1495 aa12.71□□□□□ -0.38
CWC15YDR163W NUP157P40064 1391 aaKnown RBP12.69□□□□□ -0.38
CWC15YDR163W YRF1-1P0CX20 1796 aa12.66□□□□□ -0.38
CWC15YDR163W YRF1-5P0CX21 1796 aa12.66□□□□□ -0.38
CWC15YDR163W YRF1-8P0CX22 1796 aa12.66□□□□□ -0.38
CWC15YDR163W PDR5P33302 1511 aaKnown RBP12.65□□□□□ -0.38
CWC15YDR163W YSP2Q06681 1438 aa12.63□□□□□ -0.39
CWC15YDR163W CKB1P43639 278 aa12.63□□□□□ -0.39
CWC15YDR163W BUD3P25558 1636 aa12.59□□□□□ -0.39
CWC15YDR163W NSR1P27476 414 aaKnown RBP RIP-Chip data12.59□□□□□ -0.39 RIP-Chip
CWC15YDR163W BUD21Q08492 214 aaPredicted RBP12.59□□□□□ -0.39
CWC15YDR163W SEC3P33332 1336 aaKnown RBP12.59□□□□□ -0.39
CWC15YDR163W ENP1P38333 483 aaKnown RBP12.53□□□□□ -0.4
CWC15YDR163W NOP7P53261 605 aaKnown RBP12.53□□□□□ -0.4
CWC15YDR163W HOP09932 586 aa12.51□□□□□ -0.41
CWC15YDR163W UBP10P53874 792 aaPredicted RBP12.5□□□□□ -0.41
CWC15YDR163W YOR093CQ12275 1648 aa12.49□□□□□ -0.41
CWC15YDR163W MAP2P38174 421 aaKnown RBP12.49□□□□□ -0.41
CWC15YDR163W DCD1P06773 312 aa12.48□□□□□ -0.41
CWC15YDR163W TFC8Q12308 588 aa12.48□□□□□ -0.41
CWC15YDR163W SEC7P11075 2009 aaKnown RBP12.46□□□□□ -0.41
CWC15YDR163W BNR1P40450 1375 aa12.45□□□□□ -0.42
CWC15YDR163W PAF1P38351 445 aa12.45□□□□□ -0.42
CWC15YDR163W CHC1P22137 1653 aaKnown RBP12.43□□□□□ -0.42
CWC15YDR163W TRM3Q07527 1436 aa12.41□□□□□ -0.42
CWC15YDR163W LTE1P07866 1435 aa12.4□□□□□ -0.42
CWC15YDR163W NOP2P40991 618 aaKnown RBP12.38□□□□□ -0.43
CWC15YDR163W MHP1P43638 1398 aa12.38□□□□□ -0.43
CWC15YDR163W RAV1P47104 1357 aa12.37□□□□□ -0.43
CWC15YDR163W SPT7P35177 1332 aa12.37□□□□□ -0.43
CWC15YDR163W TY3B-IQ7LHG5 1498 aaKnown RBP12.36□□□□□ -0.43
CWC15YDR163W DOP1Q03921 1698 aa12.34□□□□□ -0.43
CWC15YDR163W RTC1Q08281 1341 aa12.33□□□□□ -0.44
CWC15YDR163W RIM101P33400 625 aa12.3□□□□□ -0.44
CWC15YDR163W VMR1P38735 1592 aa12.28□□□□□ -0.44
CWC15YDR163W NUP188P52593 1655 aaKnown RBP12.28□□□□□ -0.44
CWC15YDR163W IML1P47170 1584 aa12.25□□□□□ -0.45
CWC15YDR163W DRS2P39524 1355 aa12.24□□□□□ -0.45
CWC15YDR163W PDR11P40550 1411 aa12.24□□□□□ -0.45
CWC15YDR163W YLR419WQ06698 1435 aaKnown RBP12.23□□□□□ -0.45
CWC15YDR163W SCT1P32784 759 aa12.23□□□□□ -0.45
CWC15YDR163W DNF2Q12675 1612 aa12.2□□□□□ -0.46
CWC15YDR163W SCY1P53009 804 aa12.2□□□□□ -0.46
CWC15YDR163W ESL2P36168 1195 aa12.19□□□□□ -0.46
CWC15YDR163W PRS1P32895 427 aaKnown RBP12.13□□□□□ -0.47
CWC15YDR163W PSD2P53037 1138 aaKnown RBP12.13□□□□□ -0.47
CWC15YDR163W TAF5P38129 798 aa12.12□□□□□ -0.47
CWC15YDR163W NUP192P47054 1683 aa12.12□□□□□ -0.47
CWC15YDR163W BUD31P25337 157 aaPredicted RBP12.11□□□□□ -0.47
CWC15YDR163W PDS5Q04264 1277 aa12.11□□□□□ -0.47
CWC15YDR163W ORC1P54784 914 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms