RNA–Protein interactions for RNA: YDR148C

KGD2, Transcript of Dihydrolipoyl transsuccinylase, yeastyeast

Gene KGD2, Length 1,392 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KGD2YDR148C YRF1-1P0CX20 1796 aa12.46□□□□□ -0.42
KGD2YDR148C YRF1-5P0CX21 1796 aa12.46□□□□□ -0.42
KGD2YDR148C YRF1-8P0CX22 1796 aa12.46□□□□□ -0.42
KGD2YDR148C VTH1P40438 1549 aa12.44□□□□□ -0.42
KGD2YDR148C VTH2P40890 1549 aa12.44□□□□□ -0.42
KGD2YDR148C YFR006WP43590 535 aa12.43□□□□□ -0.42
KGD2YDR148C PDR15Q04182 1529 aaKnown RBP12.4□□□□□ -0.42
KGD2YDR148C MLP2P40457 1679 aa12.4□□□□□ -0.42
KGD2YDR148C NTE1Q04958 1679 aa12.39□□□□□ -0.43
KGD2YDR148C TY1B-JR2P47100 1755 aaKnown RBP12.39□□□□□ -0.43
KGD2YDR148C TY1B-ER2Q03619 1755 aa12.39□□□□□ -0.43
KGD2YDR148C TY1B-MR1Q04214 1755 aa12.39□□□□□ -0.43
KGD2YDR148C TY1B-MR2Q04670 1755 aaKnown RBP12.39□□□□□ -0.43
KGD2YDR148C TY1B-LR1Q12088 1755 aaKnown RBP12.39□□□□□ -0.43
KGD2YDR148C TY1B-NL1Q12112 1755 aa12.39□□□□□ -0.43
KGD2YDR148C TY1B-GR1Q12141 1755 aa12.39□□□□□ -0.43
KGD2YDR148C TY1B-BLQ12490 1755 aa12.39□□□□□ -0.43
KGD2YDR148C ULS1Q08562 1619 aa12.38□□□□□ -0.43
KGD2YDR148C SNT2P53127 1403 aa12.37□□□□□ -0.43
KGD2YDR148C IFH1P39520 1085 aa12.35□□□□□ -0.43
KGD2YDR148C RPO21P04050 1733 aaKnown RBP12.33□□□□□ -0.44
KGD2YDR148C GEA1P47102 1408 aaPredicted RBP12.33□□□□□ -0.44
KGD2YDR148C IKI3Q06706 1349 aaKnown RBP12.31□□□□□ -0.44
KGD2YDR148C IRC20Q06554 1556 aa12.29□□□□□ -0.44
KGD2YDR148C NUP170P38181 1502 aa12.24□□□□□ -0.45
KGD2YDR148C MET10P39692 1035 aa12.24□□□□□ -0.45
KGD2YDR148C DNF2Q12675 1612 aa12.22□□□□□ -0.45
KGD2YDR148C TY3B-GQ99315 1547 aa12.22□□□□□ -0.45
KGD2YDR148C RTT106P40161 455 aa12.19□□□□□ -0.46
KGD2YDR148C SSM4P40318 1319 aa12.17□□□□□ -0.46
KGD2YDR148C SPO14P36126 1683 aa12.13□□□□□ -0.47
KGD2YDR148C YBT1P32386 1661 aa12.09□□□□□ -0.47
KGD2YDR148C CAT8P39113 1433 aa12.09□□□□□ -0.47
KGD2YDR148C PDR12Q02785 1511 aa12.08□□□□□ -0.48
KGD2YDR148C TRM3Q07527 1436 aa12.05□□□□□ -0.48
KGD2YDR148C IQG1Q12280 1495 aa12.04□□□□□ -0.48
KGD2YDR148C GDB1Q06625 1536 aa12.02□□□□□ -0.49
KGD2YDR148C DOP1Q03921 1698 aa12.01□□□□□ -0.49
KGD2YDR148C PDR10P51533 1564 aa12.01□□□□□ -0.49
KGD2YDR148C NUP157P40064 1391 aaKnown RBP12□□□□□ -0.49
KGD2YDR148C YOR093CQ12275 1648 aa11.98□□□□□ -0.49
KGD2YDR148C ARO1P08566 1588 aaKnown RBP11.96□□□□□ -0.5
KGD2YDR148C BUD3P25558 1636 aa11.95□□□□□ -0.5
KGD2YDR148C CKB1P43639 278 aa11.94□□□□□ -0.5
KGD2YDR148C SRB8P25648 1427 aa11.94□□□□□ -0.5
KGD2YDR148C YSP2Q06681 1438 aa11.87□□□□□ -0.51
KGD2YDR148C BUD21Q08492 214 aaPredicted RBP11.79□□□□□ -0.52
KGD2YDR148C CHC1P22137 1653 aaKnown RBP11.78□□□□□ -0.52
KGD2YDR148C GCN2P15442 1659 aa11.72□□□□□ -0.53
KGD2YDR148C DNF3Q12674 1656 aa11.72□□□□□ -0.53
KGD2YDR148C YAP3P38749 330 aa11.72□□□□□ -0.53
KGD2YDR148C BNR1P40450 1375 aa11.72□□□□□ -0.53
KGD2YDR148C SEC7P11075 2009 aaKnown RBP11.69□□□□□ -0.54
KGD2YDR148C MAK10Q02197 733 aa11.63□□□□□ -0.55
KGD2YDR148C URN1Q06525 465 aaKnown RBP11.6□□□□□ -0.55
KGD2YDR148C NOP7P53261 605 aaKnown RBP11.57□□□□□ -0.56
KGD2YDR148C POL5P39985 1022 aaKnown RBP11.55□□□□□ -0.56
KGD2YDR148C PDR5P33302 1511 aaKnown RBP11.55□□□□□ -0.56
KGD2YDR148C PAF1P38351 445 aa11.53□□□□□ -0.56
KGD2YDR148C PDR11P40550 1411 aa11.52□□□□□ -0.57
KGD2YDR148C VMR1P38735 1592 aa11.51□□□□□ -0.57
KGD2YDR148C BFR2Q06631 534 aaKnown RBP11.51□□□□□ -0.57
KGD2YDR148C RAV1P47104 1357 aa11.47□□□□□ -0.57
KGD2YDR148C NUP188P52593 1655 aaKnown RBP11.47□□□□□ -0.57
KGD2YDR148C IML1P47170 1584 aa11.43□□□□□ -0.58
KGD2YDR148C RTC1Q08281 1341 aa11.43□□□□□ -0.58
KGD2YDR148C USO1P25386 1790 aa11.4□□□□□ -0.58
KGD2YDR148C IPL1P38991 367 aa11.4□□□□□ -0.59
KGD2YDR148C YMR196WQ04336 1088 aa11.4□□□□□ -0.59
KGD2YDR148C TYS1P36421 394 aaKnown RBP11.38□□□□□ -0.59
KGD2YDR148C THI12P42883 340 aa11.36□□□□□ -0.59
KGD2YDR148C THI5P43534 340 aa11.36□□□□□ -0.59
KGD2YDR148C THI11P47183 340 aa11.36□□□□□ -0.59
KGD2YDR148C ORC1P54784 914 aaPredicted RBP11.36□□□□□ -0.59
KGD2YDR148C THI13Q07748 340 aa11.36□□□□□ -0.59
KGD2YDR148C TY3B-IQ7LHG5 1498 aaKnown RBP11.34□□□□□ -0.59
KGD2YDR148C HAP1P0CE41 1502 aa11.33□□□□□ -0.6
KGD2YDR148C TAF5P38129 798 aa11.33□□□□□ -0.6
KGD2YDR148C NUP192P47054 1683 aa11.31□□□□□ -0.6
KGD2YDR148C NSR1P27476 414 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
KGD2YDR148C TY1B-NL2Q99337 1749 aaKnown RBP11.3□□□□□ -0.6
KGD2YDR148C ESL2P36168 1195 aa11.28□□□□□ -0.6
KGD2YDR148C SPT7P35177 1332 aa11.28□□□□□ -0.6
KGD2YDR148C SEC3P33332 1336 aaKnown RBP11.27□□□□□ -0.61
KGD2YDR148C MHP1P43638 1398 aa11.26□□□□□ -0.61
KGD2YDR148C KIP3P53086 805 aaKnown RBP11.24□□□□□ -0.61
KGD2YDR148C YLR419WQ06698 1435 aaKnown RBP11.23□□□□□ -0.61
KGD2YDR148C ENP1P38333 483 aaKnown RBP11.21□□□□□ -0.61
KGD2YDR148C RAD9P14737 1309 aa11.2□□□□□ -0.62
KGD2YDR148C ALD4P46367 519 aaKnown RBP11.19□□□□□ -0.62
KGD2YDR148C BCK1Q01389 1478 aa11.17□□□□□ -0.62
KGD2YDR148C SPE2P21182 396 aa11.16□□□□□ -0.62
KGD2YDR148C PSD2P53037 1138 aaKnown RBP11.16□□□□□ -0.62
KGD2YDR148C PDS5Q04264 1277 aa11.16□□□□□ -0.62
KGD2YDR148C TAF8Q03750 510 aa11.15□□□□□ -0.63
KGD2YDR148C YAH1Q12184 172 aaKnown RBP11.15□□□□□ -0.63
KGD2YDR148C CAB1Q04430 367 aa11.14□□□□□ -0.63
KGD2YDR148C LEU3P08638 886 aa11.12□□□□□ -0.63
KGD2YDR148C GLN1P32288 370 aaKnown RBP11.09□□□□□ -0.63
KGD2YDR148C NST1P53935 1240 aa11.07□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms