RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W SLX8P40072 274 aa6.42□□□□□ -1.38
HPR1YDR138W HGH1P48362 394 aaKnown RBP6.42□□□□□ -1.38
HPR1YDR138W KTR1P27810 393 aaKnown RBP6.42□□□□□ -1.38
HPR1YDR138W GEF1P37020 779 aa6.41□□□□□ -1.38
HPR1YDR138W BIM1P40013 344 aa6.41□□□□□ -1.38
HPR1YDR138W ATG32P40458 529 aa6.41□□□□□ -1.38
HPR1YDR138W SSA1P10591 642 aaKnown RBP6.41□□□□□ -1.38
HPR1YDR138W VHR2P40041 505 aa6.39□□□□□ -1.39
HPR1YDR138W YLR326WQ06170 240 aaKnown RBP6.39□□□□□ -1.39
HPR1YDR138W ERG12P07277 443 aa6.38□□□□□ -1.39
HPR1YDR138W YJL007CP47080 104 aa6.36□□□□□ -1.39
HPR1YDR138W CSN12P47130 423 aa6.34□□□□□ -1.39
HPR1YDR138W BRL1P38770 471 aa6.34□□□□□ -1.39
HPR1YDR138W UBP10P53874 792 aaPredicted RBP6.34□□□□□ -1.39
HPR1YDR138W TIF1P10081 395 aaKnown RBP6.33□□□□□ -1.4
HPR1YDR138W YOR238WQ08634 303 aa6.33□□□□□ -1.4
HPR1YDR138W PCS60P38137 543 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
HPR1YDR138W SOL3P38858 249 aa6.32□□□□□ -1.4
HPR1YDR138W MRX12P47084 519 aa6.32□□□□□ -1.4
HPR1YDR138W NOB1Q08444 459 aaKnown RBP6.32□□□□□ -1.4
HPR1YDR138W TYW1Q08960 810 aaKnown RBP6.32□□□□□ -1.4
HPR1YDR138W PSE1P32337 1089 aaKnown RBP6.3□□□□□ -1.4
HPR1YDR138W BIO2P32451 375 aa6.3□□□□□ -1.4
HPR1YDR138W HAA1Q12753 694 aaKnown RBP6.3□□□□□ -1.4
HPR1YDR138W CPS1P27614 576 aa6.29□□□□□ -1.4
HPR1YDR138W PIB1Q06651 286 aa6.29□□□□□ -1.4
HPR1YDR138W SSA2P10592 639 aaKnown RBP6.29□□□□□ -1.4
HPR1YDR138W SLX5P32828 619 aaKnown RBP6.29□□□□□ -1.4
HPR1YDR138W ORC6P38826 435 aa6.28□□□□□ -1.4
HPR1YDR138W VMA1P17255 1071 aaKnown RBP6.28□□□□□ -1.4
HPR1YDR138W YGR273CP53329 174 aa6.28□□□□□ -1.4
HPR1YDR138W NST1P53935 1240 aa6.27□□□□□ -1.41
HPR1YDR138W KEX1P09620 729 aa6.27□□□□□ -1.41
HPR1YDR138W TTI1P36097 1038 aa6.27□□□□□ -1.41
HPR1YDR138W SSA4P22202 642 aaKnown RBP6.25□□□□□ -1.41
HPR1YDR138W IOC4Q04213 475 aa6.25□□□□□ -1.41
HPR1YDR138W YML083CQ04526 418 aa6.24□□□□□ -1.41
HPR1YDR138W SEN54Q02825 467 aaPredicted RBP6.24□□□□□ -1.41
HPR1YDR138W RGR1P19263 1082 aa6.23□□□□□ -1.41
HPR1YDR138W GUT1P32190 709 aa6.23□□□□□ -1.41
HPR1YDR138W NIS1P53939 407 aa6.22□□□□□ -1.41
HPR1YDR138W TEA1P47988 759 aa6.22□□□□□ -1.41
HPR1YDR138W YPR204WQ08995 1032 aa6.22□□□□□ -1.41
HPR1YDR138W PUP1P25043 261 aa6.2□□□□□ -1.42
HPR1YDR138W RTG2P32608 588 aaKnown RBP6.2□□□□□ -1.42
HPR1YDR138W RAD54P32863 898 aa6.2□□□□□ -1.42
HPR1YDR138W ATH1P48016 1211 aa6.2□□□□□ -1.42
HPR1YDR138W YNL108CP53929 270 aa6.2□□□□□ -1.42
HPR1YDR138W GRE2Q12068 342 aaKnown RBP6.2□□□□□ -1.42
HPR1YDR138W SCJ1P25303 377 aa6.2□□□□□ -1.42
HPR1YDR138W ILV3P39522 585 aaKnown RBP6.2□□□□□ -1.42
HPR1YDR138W SUP45P12385 437 aaKnown RBP6.19□□□□□ -1.42
HPR1YDR138W GAP1P19145 602 aaPredicted RBP6.19□□□□□ -1.42
HPR1YDR138W NSR1P27476 414 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
HPR1YDR138W PAM1P37304 830 aaKnown RBP6.19□□□□□ -1.42
HPR1YDR138W SSF1P38789 453 aaPredicted RBP6.19□□□□□ -1.42
HPR1YDR138W MVP1P40959 511 aaKnown RBP6.19□□□□□ -1.42
HPR1YDR138W NAP1P25293 417 aaKnown RBP6.18□□□□□ -1.42
HPR1YDR138W YBL036CP38197 257 aa6.18□□□□□ -1.42
HPR1YDR138W FPK1P53739 893 aa6.18□□□□□ -1.42
HPR1YDR138W KIC1P38692 1080 aa6.18□□□□□ -1.42
HPR1YDR138W YJU3P28321 313 aa6.17□□□□□ -1.42
HPR1YDR138W SAM3Q08986 587 aa6.17□□□□□ -1.42
HPR1YDR138W RAD59Q12223 238 aa6.17□□□□□ -1.42
HPR1YDR138W YDJ1P25491 409 aaKnown RBP6.16□□□□□ -1.42
HPR1YDR138W ESS1P22696 170 aa6.16□□□□□ -1.42
HPR1YDR138W HST2P53686 357 aa6.16□□□□□ -1.42
HPR1YDR138W MRX10Q05648 414 aa6.16□□□□□ -1.42
HPR1YDR138W ENO1P00924 437 aaKnown RBP6.15□□□□□ -1.43
HPR1YDR138W ENO2P00925 437 aaKnown RBP6.14□□□□□ -1.43
HPR1YDR138W CDC3P32457 520 aaKnown RBP6.14□□□□□ -1.43
HPR1YDR138W RPL34BP40525 121 aaKnown RBP6.14□□□□□ -1.43
HPR1YDR138W AIM44Q99299 758 aa6.14□□□□□ -1.43
HPR1YDR138W RRN6P32786 894 aa6.14□□□□□ -1.43
HPR1YDR138W RSC30P38781 883 aa6.13□□□□□ -1.43
HPR1YDR138W YAP5P40574 245 aa6.13□□□□□ -1.43
HPR1YDR138W PKH3Q03306 898 aaPredicted RBP6.13□□□□□ -1.43
HPR1YDR138W HAT1Q12341 374 aa6.12□□□□□ -1.43
HPR1YDR138W RPL34AP87262 121 aaPredicted RBP6.11□□□□□ -1.43
HPR1YDR138W RIM21P48565 533 aa6.11□□□□□ -1.43
HPR1YDR138W SIT4P20604 311 aa6.1□□□□□ -1.43
HPR1YDR138W CSE4P36012 229 aa6.1□□□□□ -1.43
HPR1YDR138W RDS2P19541 446 aaKnown RBP6.1□□□□□ -1.43
HPR1YDR138W MMP1Q12372 583 aa6.1□□□□□ -1.43
HPR1YDR138W GYP5Q12344 894 aa6.09□□□□□ -1.43
HPR1YDR138W YGL015CP33199 130 aa6.09□□□□□ -1.44
HPR1YDR138W TGL4P36165 910 aa6.09□□□□□ -1.44
HPR1YDR138W IPL1P38991 367 aa6.09□□□□□ -1.44
HPR1YDR138W SLD2P34252 453 aa6.08□□□□□ -1.44
HPR1YDR138W SNU71P53207 620 aaKnown RBP6.08□□□□□ -1.44
HPR1YDR138W PEP12P32854 288 aa6.08□□□□□ -1.44
HPR1YDR138W SLI15P38283 698 aa6.08□□□□□ -1.44
HPR1YDR138W YPR109WQ06104 294 aa6.08□□□□□ -1.44
HPR1YDR138W HEM3P28789 327 aa6.07□□□□□ -1.44
HPR1YDR138W NOP7P53261 605 aaKnown RBP6.07□□□□□ -1.44
HPR1YDR138W MPH3P0CE00 602 aa6.06□□□□□ -1.44
HPR1YDR138W CLB5P30283 435 aa6.06□□□□□ -1.44
HPR1YDR138W TPS3P38426 1054 aaKnown RBP6.06□□□□□ -1.44
HPR1YDR138W AI4P03878 556 aa6.05□□□□□ -1.44
HPR1YDR138W DCW1P36091 449 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms