RNA–Protein interactions for RNA: YDR104C

SPO71, Transcript of Meiosis-specific protein required for spore wall formation, yeastyeast

Gene SPO71, Length 3,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO71YDR104C RPL17AP05740 184 aaKnown RBP3.9□□□□□ -1.79
SPO71YDR104C RPL17BP46990 184 aaKnown RBP3.9□□□□□ -1.79
SPO71YDR104C HSP82P02829 709 aaKnown RBP3.89□□□□□ -1.79
SPO71YDR104C SPT21P35209 758 aa3.88□□□□□ -1.79
SPO71YDR104C RNA1P11745 407 aaKnown RBP3.88□□□□□ -1.79
SPO71YDR104C REB1P21538 810 aa3.88□□□□□ -1.79
SPO71YDR104C IFH1P39520 1085 aa3.88□□□□□ -1.79
SPO71YDR104C FPR4Q06205 392 aaPredicted RBP3.88□□□□□ -1.79
SPO71YDR104C PLP2Q12017 286 aa3.88□□□□□ -1.79
SPO71YDR104C ENP1P38333 483 aaKnown RBP3.87□□□□□ -1.79
SPO71YDR104C MDG1P53885 366 aa3.87□□□□□ -1.79
SPO71YDR104C SSN2P38931 1420 aa3.87□□□□□ -1.79
SPO71YDR104C SEC3P33332 1336 aaKnown RBP3.87□□□□□ -1.79
SPO71YDR104C CLC1P17891 233 aa3.86□□□□□ -1.79
SPO71YDR104C RIX1P38883 763 aaPredicted RBP3.86□□□□□ -1.79
SPO71YDR104C FUN12P39730 1002 aaKnown RBP3.86□□□□□ -1.79
SPO71YDR104C RPN1P38764 993 aaKnown RBP3.85□□□□□ -1.79
SPO71YDR104C AAD16Q02895 342 aa3.85□□□□□ -1.79
SPO71YDR104C PRI1P10363 409 aa3.85□□□□□ -1.79
SPO71YDR104C SPT6P23615 1451 aaKnown RBP3.84□□□□□ -1.79
SPO71YDR104C KOG1P38873 1557 aa3.84□□□□□ -1.8
SPO71YDR104C SPC110P32380 944 aa3.83□□□□□ -1.8
SPO71YDR104C NMD2P38798 1089 aaKnown RBP3.83□□□□□ -1.8
SPO71YDR104C REV3P14284 1504 aa3.83□□□□□ -1.8
SPO71YDR104C YTA7P40340 1379 aa3.82□□□□□ -1.8
SPO71YDR104C YNL011CP53980 444 aa3.82□□□□□ -1.8
SPO71YDR104C RPS0AP32905 252 aaKnown RBP3.82□□□□□ -1.8
SPO71YDR104C DMA1P38823 416 aa3.82□□□□□ -1.8
SPO71YDR104C TIF4632P39936 914 aaKnown RBP3.82□□□□□ -1.8
SPO71YDR104C ORC1P54784 914 aaPredicted RBP3.82□□□□□ -1.8
SPO71YDR104C RPA190P10964 1664 aaKnown RBP3.81□□□□□ -1.8
SPO71YDR104C GRX3Q03835 250 aa3.81□□□□□ -1.8
SPO71YDR104C HIF1Q12373 385 aa3.81□□□□□ -1.8
SPO71YDR104C MYO2P19524 1574 aaKnown RBP3.81□□□□□ -1.8
SPO71YDR104C PIL1P53252 339 aaKnown RBP3.81□□□□□ -1.8
SPO71YDR104C IME2P32581 645 aa3.81□□□□□ -1.8
SPO71YDR104C CHD1P32657 1468 aa3.8□□□□□ -1.8
SPO71YDR104C TOA1P32773 286 aa3.8□□□□□ -1.8
SPO71YDR104C NUP170P38181 1502 aa3.8□□□□□ -1.8
SPO71YDR104C VPS4P52917 437 aa3.79□□□□□ -1.8
SPO71YDR104C NHA1Q99271 985 aa3.78□□□□□ -1.8
SPO71YDR104C TLG1Q03322 224 aa3.78□□□□□ -1.8
SPO71YDR104C TSR3Q12094 313 aaKnown RBP3.78□□□□□ -1.8
SPO71YDR104C GIN4Q12263 1142 aa3.78□□□□□ -1.8
SPO71YDR104C ETT1Q08421 412 aaKnown RBP3.77□□□□□ -1.81
SPO71YDR104C DNA2P38859 1522 aa3.77□□□□□ -1.81
SPO71YDR104C ECM5Q03214 1411 aa3.77□□□□□ -1.81
SPO71YDR104C SUB1P54000 292 aaKnown RBP3.77□□□□□ -1.81
SPO71YDR104C SSA1P10591 642 aaKnown RBP3.77□□□□□ -1.81
SPO71YDR104C SSA2P10592 639 aaKnown RBP3.77□□□□□ -1.81
SPO71YDR104C SAS10Q12136 610 aaPredicted RBP3.77□□□□□ -1.81
SPO71YDR104C YRF1-1P0CX20 1796 aa3.76□□□□□ -1.81
SPO71YDR104C YRF1-5P0CX21 1796 aa3.76□□□□□ -1.81
SPO71YDR104C YRF1-8P0CX22 1796 aa3.76□□□□□ -1.81
SPO71YDR104C NNF2P53253 936 aa3.76□□□□□ -1.81
SPO71YDR104C RPO21P04050 1733 aaKnown RBP3.76□□□□□ -1.81
SPO71YDR104C YSH1Q06224 779 aaPredicted RBP3.75□□□□□ -1.81
SPO71YDR104C SPT16P32558 1035 aaKnown RBP3.75□□□□□ -1.81
SPO71YDR104C DOS2P54858 310 aa3.75□□□□□ -1.81
SPO71YDR104C YPK9Q12697 1472 aa3.74□□□□□ -1.81
SPO71YDR104C SWE1P32944 819 aa3.74□□□□□ -1.81
SPO71YDR104C MSH4P40965 878 aaPredicted RBP3.74□□□□□ -1.81
SPO71YDR104C STH1P32597 1359 aa3.74□□□□□ -1.81
SPO71YDR104C EAF7P53911 425 aaKnown RBP3.73□□□□□ -1.81
SPO71YDR104C MSH3P25336 1018 aa3.73□□□□□ -1.81
SPO71YDR104C NST1P53935 1240 aa3.72□□□□□ -1.81
SPO71YDR104C YCF1P39109 1515 aaKnown RBP3.72□□□□□ -1.81
SPO71YDR104C PAF1P38351 445 aa3.72□□□□□ -1.81
SPO71YDR104C SIC1P38634 284 aa3.72□□□□□ -1.81
SPO71YDR104C ECM16Q04217 1267 aaKnown RBP3.72□□□□□ -1.81
SPO71YDR104C MLP2P40457 1679 aa3.72□□□□□ -1.81
SPO71YDR104C OPY1P38271 328 aa3.72□□□□□ -1.81
SPO71YDR104C ULS1Q08562 1619 aa3.72□□□□□ -1.81
SPO71YDR104C MPP10P47083 593 aaKnown RBP3.71□□□□□ -1.81
SPO71YDR104C LTV1P34078 463 aa3.71□□□□□ -1.82
SPO71YDR104C RAD26P40352 1085 aa3.71□□□□□ -1.82
SPO71YDR104C YBT1P32386 1661 aa3.71□□□□□ -1.82
SPO71YDR104C NTE1Q04958 1679 aa3.71□□□□□ -1.82
SPO71YDR104C IRC20Q06554 1556 aa3.71□□□□□ -1.82
SPO71YDR104C RPO31P04051 1460 aa3.7□□□□□ -1.82
SPO71YDR104C PRS1P32895 427 aaKnown RBP3.7□□□□□ -1.82
SPO71YDR104C BRL1P38770 471 aa3.7□□□□□ -1.82
SPO71YDR104C TAN1P53072 289 aaPredicted RBP3.7□□□□□ -1.82
SPO71YDR104C RPN7Q06103 429 aaKnown RBP3.7□□□□□ -1.82
SPO71YDR104C CBF5P33322 483 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SPO71YDR104C BYE1P36106 594 aa3.7□□□□□ -1.82
SPO71YDR104C CTR9P89105 1077 aa3.7□□□□□ -1.82
SPO71YDR104C SMC3P47037 1230 aa3.7□□□□□ -1.82
SPO71YDR104C PRP3Q03338 469 aaPredicted RBP3.7□□□□□ -1.82
SPO71YDR104C SCC2Q04002 1493 aa3.7□□□□□ -1.82
SPO71YDR104C RRP14P36080 434 aaKnown RBP3.69□□□□□ -1.82
SPO71YDR104C MDS3P53094 1487 aa3.69□□□□□ -1.82
SPO71YDR104C PET111P08468 800 aa3.69□□□□□ -1.82
SPO71YDR104C MCM1P11746 286 aa3.69□□□□□ -1.82
SPO71YDR104C SAP190P36123 1033 aa3.69□□□□□ -1.82
SPO71YDR104C SNF7P39929 240 aaKnown RBP3.69□□□□□ -1.82
SPO71YDR104C PTP3P40048 928 aa3.69□□□□□ -1.82
SPO71YDR104C PEA2P40091 420 aa3.69□□□□□ -1.82
SPO71YDR104C NOP8Q08287 484 aaPredicted RBP3.69□□□□□ -1.82
SPO71YDR104C ESC1Q03661 1658 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms