RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL228CYDL228C ESC1Q03661 1658 aaKnown RBP6.86□□□□□ -1.31
YDL228CYDL228C PTP3P40048 928 aa6.85□□□□□ -1.31
YDL228CYDL228C MAP2P38174 421 aaKnown RBP6.84□□□□□ -1.31
YDL228CYDL228C STU1P38198 1513 aa6.83□□□□□ -1.32
YDL228CYDL228C BCH2P36122 765 aa6.83□□□□□ -1.32
YDL228CYDL228C RPA190P10964 1664 aaKnown RBP6.83□□□□□ -1.32
YDL228CYDL228C MET5P47169 1442 aa6.83□□□□□ -1.32
YDL228CYDL228C MMS22Q06164 1454 aa6.82□□□□□ -1.32
YDL228CYDL228C YOR1P53049 1477 aa6.81□□□□□ -1.32
YDL228CYDL228C SMC4Q12267 1418 aa6.8□□□□□ -1.32
YDL228CYDL228C YGL015CP33199 130 aa6.79□□□□□ -1.32
YDL228CYDL228C YIL055CP40523 627 aaKnown RBP6.77□□□□□ -1.33
YDL228CYDL228C SCY1P53009 804 aa6.77□□□□□ -1.33
YDL228CYDL228C YLR271WQ06152 274 aa6.77□□□□□ -1.33
YDL228CYDL228C SPP41P38904 1435 aa6.76□□□□□ -1.33
YDL228CYDL228C SSP1P38871 571 aa6.74□□□□□ -1.33
YDL228CYDL228C TRM732Q03496 1420 aa6.74□□□□□ -1.33
YDL228CYDL228C TY1B-JR2P47100 1755 aaKnown RBP6.73□□□□□ -1.33
YDL228CYDL228C TY1B-ER2Q03619 1755 aa6.73□□□□□ -1.33
YDL228CYDL228C TY1B-MR1Q04214 1755 aa6.73□□□□□ -1.33
YDL228CYDL228C TY1B-MR2Q04670 1755 aaKnown RBP6.73□□□□□ -1.33
YDL228CYDL228C TY1B-LR1Q12088 1755 aaKnown RBP6.73□□□□□ -1.33
YDL228CYDL228C TY1B-NL1Q12112 1755 aa6.73□□□□□ -1.33
YDL228CYDL228C TY1B-GR1Q12141 1755 aa6.73□□□□□ -1.33
YDL228CYDL228C TY1B-BLQ12490 1755 aa6.73□□□□□ -1.33
YDL228CYDL228C RSM7P47150 247 aa6.72□□□□□ -1.33
YDL228CYDL228C UBP10P53874 792 aaPredicted RBP6.72□□□□□ -1.33
YDL228CYDL228C LTE1P07866 1435 aa6.72□□□□□ -1.33
YDL228CYDL228C TSC11P40061 1430 aa6.71□□□□□ -1.34
YDL228CYDL228C YRF1-1P0CX20 1796 aa6.71□□□□□ -1.34
YDL228CYDL228C YRF1-5P0CX21 1796 aa6.71□□□□□ -1.34
YDL228CYDL228C YRF1-8P0CX22 1796 aa6.71□□□□□ -1.34
YDL228CYDL228C BNI1P41832 1953 aa6.7□□□□□ -1.34
YDL228CYDL228C NUP159P40477 1460 aa6.7□□□□□ -1.34
YDL228CYDL228C VTH1P40438 1549 aa6.7□□□□□ -1.34
YDL228CYDL228C VTH2P40890 1549 aa6.7□□□□□ -1.34
YDL228CYDL228C EPS1P40557 701 aa6.69□□□□□ -1.34
YDL228CYDL228C NTE1Q04958 1679 aa6.67□□□□□ -1.34
YDL228CYDL228C ITT1Q04638 464 aa6.66□□□□□ -1.34
YDL228CYDL228C AI2P03876 854 aa6.65□□□□□ -1.34
YDL228CYDL228C BDF1P35817 686 aa6.65□□□□□ -1.34
YDL228CYDL228C YTA7P40340 1379 aa6.65□□□□□ -1.35
YDL228CYDL228C RPO21P04050 1733 aaKnown RBP6.64□□□□□ -1.35
YDL228CYDL228C MYO4P32492 1471 aa6.64□□□□□ -1.35
YDL228CYDL228C VPS15P22219 1454 aa6.63□□□□□ -1.35
YDL228CYDL228C SNQ2P32568 1501 aaKnown RBP6.63□□□□□ -1.35
YDL228CYDL228C GEA2P39993 1459 aaKnown RBP6.63□□□□□ -1.35
YDL228CYDL228C SNT2P53127 1403 aa6.61□□□□□ -1.35
YDL228CYDL228C BUD31P25337 157 aaPredicted RBP6.61□□□□□ -1.35
YDL228CYDL228C PSD2P53037 1138 aaKnown RBP6.6□□□□□ -1.35
YDL228CYDL228C CST9Q06032 482 aa6.6□□□□□ -1.35
YDL228CYDL228C SLX5P32828 619 aaKnown RBP6.58□□□□□ -1.36
YDL228CYDL228C MMS1Q06211 1407 aa6.56□□□□□ -1.36
YDL228CYDL228C STH1P32597 1359 aa6.56□□□□□ -1.36
YDL228CYDL228C DRS2P39524 1355 aa6.56□□□□□ -1.36
YDL228CYDL228C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
YDL228CYDL228C SPO14P36126 1683 aa6.54□□□□□ -1.36
YDL228CYDL228C ULS1Q08562 1619 aa6.54□□□□□ -1.36
YDL228CYDL228C MET10P39692 1035 aa6.53□□□□□ -1.36
YDL228CYDL228C MIF2P35201 549 aa6.52□□□□□ -1.37
YDL228CYDL228C BBC1P47068 1157 aa6.52□□□□□ -1.37
YDL228CYDL228C NUP170P38181 1502 aa6.5□□□□□ -1.37
YDL228CYDL228C PDR12Q02785 1511 aa6.5□□□□□ -1.37
YDL228CYDL228C PDR15Q04182 1529 aaKnown RBP6.5□□□□□ -1.37
YDL228CYDL228C MLP2P40457 1679 aa6.49□□□□□ -1.37
YDL228CYDL228C MGA2P40578 1113 aa6.49□□□□□ -1.37
YDL228CYDL228C SAS10Q12136 610 aaPredicted RBP6.49□□□□□ -1.37
YDL228CYDL228C ABP1P15891 592 aaKnown RBP6.48□□□□□ -1.37
YDL228CYDL228C RTT106P40161 455 aa6.48□□□□□ -1.37
YDL228CYDL228C GDB1Q06625 1536 aa6.48□□□□□ -1.37
YDL228CYDL228C IRC20Q06554 1556 aa6.48□□□□□ -1.37
YDL228CYDL228C MRM1P25270 412 aa6.47□□□□□ -1.37
YDL228CYDL228C NUP157P40064 1391 aaKnown RBP6.46□□□□□ -1.37
YDL228CYDL228C DNF2Q12675 1612 aa6.45□□□□□ -1.38
YDL228CYDL228C DOP1Q03921 1698 aa6.43□□□□□ -1.38
YDL228CYDL228C IQG1Q12280 1495 aa6.43□□□□□ -1.38
YDL228CYDL228C RCR1P38212 213 aa6.42□□□□□ -1.38
YDL228CYDL228C IFH1P39520 1085 aa6.42□□□□□ -1.38
YDL228CYDL228C PDR10P51533 1564 aa6.42□□□□□ -1.38
YDL228CYDL228C TY3B-GQ99315 1547 aa6.4□□□□□ -1.38
YDL228CYDL228C TAF7Q05021 590 aa6.39□□□□□ -1.39
YDL228CYDL228C GEA1P47102 1408 aaPredicted RBP6.38□□□□□ -1.39
YDL228CYDL228C TRM3Q07527 1436 aa6.38□□□□□ -1.39
YDL228CYDL228C ARO1P08566 1588 aaKnown RBP6.37□□□□□ -1.39
YDL228CYDL228C TIF4632P39936 914 aaKnown RBP6.37□□□□□ -1.39
YDL228CYDL228C TGL3P40308 642 aa6.37□□□□□ -1.39
YDL228CYDL228C BUD3P25558 1636 aa6.36□□□□□ -1.39
YDL228CYDL228C YBT1P32386 1661 aa6.35□□□□□ -1.39
YDL228CYDL228C CAT8P39113 1433 aa6.33□□□□□ -1.4
YDL228CYDL228C YFR006WP43590 535 aa6.33□□□□□ -1.4
YDL228CYDL228C YSP2Q06681 1438 aa6.33□□□□□ -1.4
YDL228CYDL228C VPS29P38759 282 aa6.32□□□□□ -1.4
YDL228CYDL228C CHC1P22137 1653 aaKnown RBP6.32□□□□□ -1.4
YDL228CYDL228C SEC7P11075 2009 aaKnown RBP6.3□□□□□ -1.4
YDL228CYDL228C PIB1Q06651 286 aa6.3□□□□□ -1.4
YDL228CYDL228C YOR093CQ12275 1648 aa6.29□□□□□ -1.4
YDL228CYDL228C RAM2P29703 316 aa6.29□□□□□ -1.4
YDL228CYDL228C CKB1P43639 278 aa6.28□□□□□ -1.4
YDL228CYDL228C RTG3P38165 486 aa6.27□□□□□ -1.41
YDL228CYDL228C STS1P38637 319 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms