RNA–Protein interactions for RNA: YCR079W

PTC6, Transcript of Mitochondrial type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC6, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC6YCR079W PDR15Q04182 1529 aaKnown RBP12.39□□□□□ -0.43
PTC6YCR079W SNT2P53127 1403 aa12.38□□□□□ -0.43
PTC6YCR079W ULS1Q08562 1619 aa12.37□□□□□ -0.43
PTC6YCR079W NTE1Q04958 1679 aa12.35□□□□□ -0.43
PTC6YCR079W RPO21P04050 1733 aaKnown RBP12.33□□□□□ -0.44
PTC6YCR079W MET5P47169 1442 aa12.29□□□□□ -0.44
PTC6YCR079W GEA1P47102 1408 aaPredicted RBP12.28□□□□□ -0.44
PTC6YCR079W NUP159P40477 1460 aa12.27□□□□□ -0.45
PTC6YCR079W IFH1P39520 1085 aa12.26□□□□□ -0.45
PTC6YCR079W GEA2P39993 1459 aaKnown RBP12.24□□□□□ -0.45
PTC6YCR079W YRF1-1P0CX20 1796 aa12.21□□□□□ -0.45
PTC6YCR079W YRF1-5P0CX21 1796 aa12.21□□□□□ -0.45
PTC6YCR079W YRF1-8P0CX22 1796 aa12.21□□□□□ -0.45
PTC6YCR079W RTT106P40161 455 aa12.21□□□□□ -0.45
PTC6YCR079W IRC20Q06554 1556 aa12.2□□□□□ -0.46
PTC6YCR079W IKI3Q06706 1349 aaKnown RBP12.18□□□□□ -0.46
PTC6YCR079W TY3B-GQ99315 1547 aa12.17□□□□□ -0.46
PTC6YCR079W VPS15P22219 1454 aa12.14□□□□□ -0.47
PTC6YCR079W NUP170P38181 1502 aa12.13□□□□□ -0.47
PTC6YCR079W PDR12Q02785 1511 aa12.12□□□□□ -0.47
PTC6YCR079W YBT1P32386 1661 aa12.12□□□□□ -0.47
PTC6YCR079W MET10P39692 1035 aa12.11□□□□□ -0.47
PTC6YCR079W CAT8P39113 1433 aa12.11□□□□□ -0.47
PTC6YCR079W SPO14P36126 1683 aa12.09□□□□□ -0.47
PTC6YCR079W GDB1Q06625 1536 aa12.05□□□□□ -0.48
PTC6YCR079W PDR10P51533 1564 aa12.04□□□□□ -0.48
PTC6YCR079W BFR2Q06631 534 aaKnown RBP12.02□□□□□ -0.49
PTC6YCR079W NUP157P40064 1391 aaKnown RBP12.01□□□□□ -0.49
PTC6YCR079W LTE1P07866 1435 aa12□□□□□ -0.49
PTC6YCR079W SSM4P40318 1319 aa11.99□□□□□ -0.49
PTC6YCR079W ARO1P08566 1588 aaKnown RBP11.96□□□□□ -0.5
PTC6YCR079W BNI1P41832 1953 aa11.95□□□□□ -0.5
PTC6YCR079W SRB8P25648 1427 aa11.92□□□□□ -0.5
PTC6YCR079W IQG1Q12280 1495 aa11.91□□□□□ -0.5
PTC6YCR079W BUD3P25558 1636 aa11.89□□□□□ -0.51
PTC6YCR079W CKB1P43639 278 aa11.88□□□□□ -0.51
PTC6YCR079W YSP2Q06681 1438 aa11.86□□□□□ -0.51
PTC6YCR079W SEC7P11075 2009 aaKnown RBP11.84□□□□□ -0.51
PTC6YCR079W DRS2P39524 1355 aa11.81□□□□□ -0.52
PTC6YCR079W MMS1Q06211 1407 aa11.8□□□□□ -0.52
PTC6YCR079W DOP1Q03921 1698 aa11.78□□□□□ -0.52
PTC6YCR079W TRM3Q07527 1436 aa11.77□□□□□ -0.53
PTC6YCR079W DIP2Q12220 943 aaPredicted RBP11.77□□□□□ -0.53
PTC6YCR079W ITT1Q04638 464 aa11.75□□□□□ -0.53
PTC6YCR079W BUD21Q08492 214 aaPredicted RBP11.75□□□□□ -0.53
PTC6YCR079W BNR1P40450 1375 aa11.74□□□□□ -0.53
PTC6YCR079W GCN2P15442 1659 aa11.73□□□□□ -0.53
PTC6YCR079W CHC1P22137 1653 aaKnown RBP11.71□□□□□ -0.53
PTC6YCR079W AVT3P36062 692 aa11.7□□□□□ -0.54
PTC6YCR079W MIF2P35201 549 aa11.67□□□□□ -0.54
PTC6YCR079W YOR093CQ12275 1648 aa11.58□□□□□ -0.56
PTC6YCR079W TFA1P36100 482 aa11.58□□□□□ -0.56
PTC6YCR079W DNF2Q12675 1612 aa11.56□□□□□ -0.56
PTC6YCR079W PDR5P33302 1511 aaKnown RBP11.55□□□□□ -0.56
PTC6YCR079W NUP188P52593 1655 aaKnown RBP11.53□□□□□ -0.56
PTC6YCR079W VMR1P38735 1592 aa11.51□□□□□ -0.57
PTC6YCR079W PAF1P38351 445 aa11.48□□□□□ -0.57
PTC6YCR079W NOP7P53261 605 aaKnown RBP11.48□□□□□ -0.57
PTC6YCR079W URN1Q06525 465 aaKnown RBP11.46□□□□□ -0.57
PTC6YCR079W IML1P47170 1584 aa11.45□□□□□ -0.58
PTC6YCR079W PDR11P40550 1411 aa11.44□□□□□ -0.58
PTC6YCR079W ABP1P15891 592 aaKnown RBP11.43□□□□□ -0.58
PTC6YCR079W RAV1P47104 1357 aa11.42□□□□□ -0.58
PTC6YCR079W YAP3P38749 330 aa11.39□□□□□ -0.59
PTC6YCR079W IPL1P38991 367 aa11.39□□□□□ -0.59
PTC6YCR079W RTC1Q08281 1341 aa11.38□□□□□ -0.59
PTC6YCR079W TYS1P36421 394 aaKnown RBP11.35□□□□□ -0.59
PTC6YCR079W HAP1P0CE41 1502 aa11.33□□□□□ -0.6
PTC6YCR079W POL5P39985 1022 aaKnown RBP11.33□□□□□ -0.6
PTC6YCR079W DNF3Q12674 1656 aa11.31□□□□□ -0.6
PTC6YCR079W YFR006WP43590 535 aa11.3□□□□□ -0.6
PTC6YCR079W NUP192P47054 1683 aa11.28□□□□□ -0.6
PTC6YCR079W TY3B-IQ7LHG5 1498 aaKnown RBP11.25□□□□□ -0.61
PTC6YCR079W ESL2P36168 1195 aa11.24□□□□□ -0.61
PTC6YCR079W TAF5P38129 798 aa11.21□□□□□ -0.61
PTC6YCR079W ALD4P46367 519 aaKnown RBP11.17□□□□□ -0.62
PTC6YCR079W MAK10Q02197 733 aa11.16□□□□□ -0.62
PTC6YCR079W BCK1Q01389 1478 aa11.15□□□□□ -0.62
PTC6YCR079W ORC1P54784 914 aaPredicted RBP11.14□□□□□ -0.63
PTC6YCR079W RAD9P14737 1309 aa11.13□□□□□ -0.63
PTC6YCR079W KIP3P53086 805 aaKnown RBP11.12□□□□□ -0.63
PTC6YCR079W YLR419WQ06698 1435 aaKnown RBP11.12□□□□□ -0.63
PTC6YCR079W MHP1P43638 1398 aa11.11□□□□□ -0.63
PTC6YCR079W ISW2Q08773 1120 aa11.1□□□□□ -0.63
PTC6YCR079W CAB1Q04430 367 aa11.09□□□□□ -0.63
PTC6YCR079W SPE2P21182 396 aa11.08□□□□□ -0.64
PTC6YCR079W SCT1P32784 759 aa11.08□□□□□ -0.64
PTC6YCR079W TAF8Q03750 510 aa11.08□□□□□ -0.64
PTC6YCR079W MRX12P47084 519 aa11.07□□□□□ -0.64
PTC6YCR079W SEC3P33332 1336 aaKnown RBP11.07□□□□□ -0.64
PTC6YCR079W NAP1P25293 417 aaKnown RBP11.06□□□□□ -0.64
PTC6YCR079W KRE5P22023 1365 aa11.06□□□□□ -0.64
PTC6YCR079W CFT1Q06632 1357 aaKnown RBP11.06□□□□□ -0.64
PTC6YCR079W TY1B-NL2Q99337 1749 aaKnown RBP11.05□□□□□ -0.64
PTC6YCR079W FAP1P53971 965 aa11.05□□□□□ -0.64
PTC6YCR079W USO1P25386 1790 aa11.04□□□□□ -0.64
PTC6YCR079W RIA1P53893 1110 aa11.02□□□□□ -0.65
PTC6YCR079W PRI1P10363 409 aa11□□□□□ -0.65
PTC6YCR079W PDS5Q04264 1277 aa10.99□□□□□ -0.65
PTC6YCR079W SPT7P35177 1332 aa10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms