RNA–Protein interactions for RNA: YCR040W

MATALPHA1, Transcript of Transcriptional co-activator that regulates mating-type-specific genes, yeastyeast

Gene MATALPHA1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA1YCR040W YOR238WQ08634 303 aa8.35□□□□□ -1.07
MATALPHA1YCR040W KIC1P38692 1080 aa8.34□□□□□ -1.07
MATALPHA1YCR040W GEF1P37020 779 aa8.33□□□□□ -1.08
MATALPHA1YCR040W PSE1P32337 1089 aaKnown RBP8.32□□□□□ -1.08
MATALPHA1YCR040W YML020WQ03722 664 aa8.32□□□□□ -1.08
MATALPHA1YCR040W VHR2P40041 505 aa8.31□□□□□ -1.08
MATALPHA1YCR040W UBP14P38237 781 aaKnown RBP8.3□□□□□ -1.08
MATALPHA1YCR040W YDR090CQ03193 310 aa8.3□□□□□ -1.08
MATALPHA1YCR040W AIM44Q99299 758 aa8.3□□□□□ -1.08
MATALPHA1YCR040W CSN12P47130 423 aa8.29□□□□□ -1.08
MATALPHA1YCR040W NOP8Q08287 484 aaPredicted RBP8.29□□□□□ -1.08
MATALPHA1YCR040W NSR1P27476 414 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
MATALPHA1YCR040W ATH1P48016 1211 aa8.28□□□□□ -1.08
MATALPHA1YCR040W SUB2Q07478 446 aaKnown RBP8.28□□□□□ -1.08
MATALPHA1YCR040W SLX8P40072 274 aa8.27□□□□□ -1.09
MATALPHA1YCR040W YLR326WQ06170 240 aaKnown RBP8.26□□□□□ -1.09
MATALPHA1YCR040W SSA4P22202 642 aaKnown RBP8.25□□□□□ -1.09
MATALPHA1YCR040W GUT1P32190 709 aa8.25□□□□□ -1.09
MATALPHA1YCR040W GRE2Q12068 342 aaKnown RBP8.25□□□□□ -1.09
MATALPHA1YCR040W PKC1P24583 1151 aa8.24□□□□□ -1.09
MATALPHA1YCR040W BIM1P40013 344 aa8.24□□□□□ -1.09
MATALPHA1YCR040W RAD54P32863 898 aa8.23□□□□□ -1.09
MATALPHA1YCR040W TIF4632P39936 914 aaKnown RBP8.23□□□□□ -1.09
MATALPHA1YCR040W RPL34BP40525 121 aaKnown RBP8.23□□□□□ -1.09
MATALPHA1YCR040W YJL007CP47080 104 aa8.23□□□□□ -1.09
MATALPHA1YCR040W VMA1P17255 1071 aaKnown RBP8.22□□□□□ -1.09
MATALPHA1YCR040W TGL3P40308 642 aa8.21□□□□□ -1.1
MATALPHA1YCR040W YAP5P40574 245 aa8.21□□□□□ -1.1
MATALPHA1YCR040W TEA1P47988 759 aa8.2□□□□□ -1.1
MATALPHA1YCR040W YGR273CP53329 174 aa8.2□□□□□ -1.1
MATALPHA1YCR040W CLB5P30283 435 aa8.19□□□□□ -1.1
MATALPHA1YCR040W GLN1P32288 370 aaKnown RBP8.18□□□□□ -1.1
MATALPHA1YCR040W ATG32P40458 529 aa8.17□□□□□ -1.1
MATALPHA1YCR040W KEX1P09620 729 aa8.16□□□□□ -1.1
MATALPHA1YCR040W SLD2P34252 453 aa8.15□□□□□ -1.1
MATALPHA1YCR040W YBL036CP38197 257 aa8.15□□□□□ -1.1
MATALPHA1YCR040W PCS60P38137 543 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
MATALPHA1YCR040W TIF1P10081 395 aaKnown RBP8.13□□□□□ -1.11
MATALPHA1YCR040W ORC6P38826 435 aa8.13□□□□□ -1.11
MATALPHA1YCR040W SAM3Q08986 587 aa8.13□□□□□ -1.11
MATALPHA1YCR040W RPL34AP87262 121 aaPredicted RBP8.12□□□□□ -1.11
MATALPHA1YCR040W PIB1Q06651 286 aa8.12□□□□□ -1.11
MATALPHA1YCR040W CSE4P36012 229 aa8.11□□□□□ -1.11
MATALPHA1YCR040W KTR1P27810 393 aaKnown RBP8.1□□□□□ -1.11
MATALPHA1YCR040W RPP1BP10622 106 aaKnown RBP8.09□□□□□ -1.11
MATALPHA1YCR040W GYP5Q12344 894 aa8.09□□□□□ -1.11
MATALPHA1YCR040W NOP7P53261 605 aaKnown RBP8.08□□□□□ -1.12
MATALPHA1YCR040W YMR196WQ04336 1088 aa8.08□□□□□ -1.12
MATALPHA1YCR040W SIS2P36024 562 aa8.07□□□□□ -1.12
MATALPHA1YCR040W HST2P53686 357 aa8.07□□□□□ -1.12
MATALPHA1YCR040W RGR1P19263 1082 aa8.06□□□□□ -1.12
MATALPHA1YCR040W RTG2P32608 588 aaKnown RBP8.06□□□□□ -1.12
MATALPHA1YCR040W TTI1P36097 1038 aa8.06□□□□□ -1.12
MATALPHA1YCR040W YPR204WQ08995 1032 aa8.06□□□□□ -1.12
MATALPHA1YCR040W CPS1P27614 576 aa8.05□□□□□ -1.12
MATALPHA1YCR040W BIO2P32451 375 aa8.05□□□□□ -1.12
MATALPHA1YCR040W CDC3P32457 520 aaKnown RBP8.05□□□□□ -1.12
MATALPHA1YCR040W TYW1Q08960 810 aaKnown RBP8.05□□□□□ -1.12
MATALPHA1YCR040W ERG12P07277 443 aa8.04□□□□□ -1.12
MATALPHA1YCR040W SOL3P38858 249 aa8.04□□□□□ -1.12
MATALPHA1YCR040W SPT5P27692 1063 aaKnown RBP8.03□□□□□ -1.12
MATALPHA1YCR040W CSC1Q06538 782 aa8.03□□□□□ -1.12
MATALPHA1YCR040W MMP1Q12372 583 aa8.03□□□□□ -1.12
MATALPHA1YCR040W MVP1P40959 511 aaKnown RBP8.02□□□□□ -1.13
MATALPHA1YCR040W SNU71P53207 620 aaKnown RBP8.02□□□□□ -1.13
MATALPHA1YCR040W RAD59Q12223 238 aa8.02□□□□□ -1.13
MATALPHA1YCR040W AI4P03878 556 aa8.01□□□□□ -1.13
MATALPHA1YCR040W FPK1P53739 893 aa8.01□□□□□ -1.13
MATALPHA1YCR040W NIS1P53939 407 aa8.01□□□□□ -1.13
MATALPHA1YCR040W PKH3Q03306 898 aaPredicted RBP8.01□□□□□ -1.13
MATALPHA1YCR040W MRX12P47084 519 aa8□□□□□ -1.13
MATALPHA1YCR040W GTT3P39996 337 aa7.99□□□□□ -1.13
MATALPHA1YCR040W YNL108CP53929 270 aa7.99□□□□□ -1.13
MATALPHA1YCR040W MPH3P0CE00 602 aa7.98□□□□□ -1.13
MATALPHA1YCR040W HTA1P04911 132 aaKnown RBP7.97□□□□□ -1.13
MATALPHA1YCR040W HTA2P04912 132 aa7.97□□□□□ -1.13
MATALPHA1YCR040W GAP1P19145 602 aaPredicted RBP7.97□□□□□ -1.13
MATALPHA1YCR040W DCW1P36091 449 aa7.97□□□□□ -1.13
MATALPHA1YCR040W SSF1P38789 453 aaPredicted RBP7.97□□□□□ -1.13
MATALPHA1YCR040W NST1P53935 1240 aa7.97□□□□□ -1.13
MATALPHA1YCR040W ORC1P54784 914 aaPredicted RBP7.97□□□□□ -1.13
MATALPHA1YCR040W NOB1Q08444 459 aaKnown RBP7.97□□□□□ -1.13
MATALPHA1YCR040W SUP45P12385 437 aaKnown RBP7.96□□□□□ -1.14
MATALPHA1YCR040W TFB4Q12004 338 aa7.96□□□□□ -1.14
MATALPHA1YCR040W ARG8P18544 423 aa7.95□□□□□ -1.14
MATALPHA1YCR040W ESS1P22696 170 aa7.95□□□□□ -1.14
MATALPHA1YCR040W HEM3P28789 327 aa7.94□□□□□ -1.14
MATALPHA1YCR040W YPR109WQ06104 294 aa7.94□□□□□ -1.14
MATALPHA1YCR040W MST1P07236 462 aa7.93□□□□□ -1.14
MATALPHA1YCR040W SIT4P20604 311 aa7.93□□□□□ -1.14
MATALPHA1YCR040W YPP1P46951 817 aa7.93□□□□□ -1.14
MATALPHA1YCR040W YOL036WQ08206 761 aa7.92□□□□□ -1.14
MATALPHA1YCR040W PEX21P50091 288 aa7.91□□□□□ -1.14
MATALPHA1YCR040W LAM6Q08001 693 aa7.91□□□□□ -1.14
MATALPHA1YCR040W ENO1P00924 437 aaKnown RBP7.9□□□□□ -1.14
MATALPHA1YCR040W ENO2P00925 437 aaKnown RBP7.9□□□□□ -1.14
MATALPHA1YCR040W MAK16P10962 306 aaPredicted RBP7.9□□□□□ -1.14
MATALPHA1YCR040W PUP1P25043 261 aa7.9□□□□□ -1.14
MATALPHA1YCR040W YJU3P28321 313 aa7.89□□□□□ -1.15
MATALPHA1YCR040W ASF1P32447 279 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms