RNA–Protein interactions for RNA: YBR038W

CHS2, Transcript of Chitin synthase II, yeast

Gene CHS2, Length 2,892 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS2	YBR038W	TY1B-PL	Q12414	1755 aa	Known RBP	4.41	□□□□□ -1.7
CHS2	YBR038W	STH1	P32597	1359 aa		4.41	□□□□□ -1.7
CHS2	YBR038W	PDR15	Q04182	1529 aa	Known RBP	4.4	□□□□□ -1.7
CHS2	YBR038W	TY1B-BR	Q12193	1756 aa		4.4	□□□□□ -1.71
CHS2	YBR038W	TY1B-GR3	Q12316	1755 aa		4.4	□□□□□ -1.71
CHS2	YBR038W	TY1B-OR	Q92393	1755 aa		4.4	□□□□□ -1.71
CHS2	YBR038W	GEA1	P47102	1408 aa	Predicted RBP	4.39	□□□□□ -1.71
CHS2	YBR038W	MRPL32	P25348	183 aa		4.39	□□□□□ -1.71
CHS2	YBR038W	SAS10	Q12136	610 aa	Predicted RBP	4.39	□□□□□ -1.71
CHS2	YBR038W	SNT2	P53127	1403 aa		4.38	□□□□□ -1.71
CHS2	YBR038W	SSM4	P40318	1319 aa		4.37	□□□□□ -1.71
CHS2	YBR038W	OXP1	P28273	1286 aa		4.37	□□□□□ -1.71
CHS2	YBR038W	PDR10	P51533	1564 aa		4.37	□□□□□ -1.71
CHS2	YBR038W	TSC11	P40061	1430 aa		4.36	□□□□□ -1.71
CHS2	YBR038W	TY3B-G	Q99315	1547 aa		4.36	□□□□□ -1.71
CHS2	YBR038W	DCD1	P06773	312 aa		4.36	□□□□□ -1.71
CHS2	YBR038W	VTH1	P40438	1549 aa		4.36	□□□□□ -1.71
CHS2	YBR038W	VTH2	P40890	1549 aa		4.36	□□□□□ -1.71
CHS2	YBR038W	PAN1	P32521	1480 aa		4.35	□□□□□ -1.71
CHS2	YBR038W	ESC1	Q03661	1658 aa	Known RBP	4.35	□□□□□ -1.71
CHS2	YBR038W	TFC8	Q12308	588 aa		4.35	□□□□□ -1.71
CHS2	YBR038W	RQC2	Q12532	1038 aa	Known RBP	4.35	□□□□□ -1.71
CHS2	YBR038W	IRC20	Q06554	1556 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-JR2	P47100	1755 aa	Known RBP	4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-ER2	Q03619	1755 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-MR1	Q04214	1755 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-NL1	Q12112	1755 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-GR1	Q12141	1755 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	TY1B-BL	Q12490	1755 aa		4.34	□□□□□ -1.71
CHS2	YBR038W	YBT1	P32386	1661 aa		4.34	□□□□□ -1.72
CHS2	YBR038W	CAT8	P39113	1433 aa		4.34	□□□□□ -1.72
CHS2	YBR038W	CDC25	P04821	1589 aa		4.33	□□□□□ -1.72
CHS2	YBR038W	HO	P09932	586 aa		4.32	□□□□□ -1.72
CHS2	YBR038W	GEA2	P39993	1459 aa	Known RBP	4.31	□□□□□ -1.72
CHS2	YBR038W	PDR5	P33302	1511 aa	Known RBP	4.31	□□□□□ -1.72
CHS2	YBR038W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.31	□□□□□ -1.72	not detected
CHS2	YBR038W	VPS15	P22219	1454 aa		4.31	□□□□□ -1.72
CHS2	YBR038W	NOP2	P40991	618 aa	Known RBP	4.31	□□□□□ -1.72
CHS2	YBR038W	GCN2	P15442	1659 aa		4.3	□□□□□ -1.72
CHS2	YBR038W	RPO21	P04050	1733 aa	Known RBP	4.29	□□□□□ -1.72
CHS2	YBR038W	SEC3	P33332	1336 aa	Known RBP	4.29	□□□□□ -1.72
CHS2	YBR038W	NTE1	Q04958	1679 aa		4.29	□□□□□ -1.72
CHS2	YBR038W	ENP1	P38333	483 aa	Known RBP	4.28	□□□□□ -1.72
CHS2	YBR038W	POL5	P39985	1022 aa	Known RBP	4.28	□□□□□ -1.73
CHS2	YBR038W	NUP159	P40477	1460 aa		4.27	□□□□□ -1.73
CHS2	YBR038W	DNF1	P32660	1571 aa		4.27	□□□□□ -1.73
CHS2	YBR038W	RPA190	P10964	1664 aa	Known RBP	4.26	□□□□□ -1.73
CHS2	YBR038W	IQG1	Q12280	1495 aa		4.26	□□□□□ -1.73
CHS2	YBR038W	SRB8	P25648	1427 aa		4.26	□□□□□ -1.73
CHS2	YBR038W	PDR12	Q02785	1511 aa		4.26	□□□□□ -1.73
CHS2	YBR038W	IFH1	P39520	1085 aa		4.25	□□□□□ -1.73
CHS2	YBR038W	ARO1	P08566	1588 aa	Known RBP	4.24	□□□□□ -1.73
CHS2	YBR038W	BCH2	P36122	765 aa		4.24	□□□□□ -1.73
CHS2	YBR038W	MMS1	Q06211	1407 aa		4.23	□□□□□ -1.73
CHS2	YBR038W	GDB1	Q06625	1536 aa		4.22	□□□□□ -1.73
CHS2	YBR038W	MAP2	P38174	421 aa	Known RBP	4.19	□□□□□ -1.74
CHS2	YBR038W	RTT106	P40161	455 aa		4.19	□□□□□ -1.74
CHS2	YBR038W	YLR271W	Q06152	274 aa		4.19	□□□□□ -1.74
CHS2	YBR038W	YLR419W	Q06698	1435 aa	Known RBP	4.19	□□□□□ -1.74
CHS2	YBR038W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.19	□□□□□ -1.74
CHS2	YBR038W	SPO14	P36126	1683 aa		4.18	□□□□□ -1.74
CHS2	YBR038W	YOR093C	Q12275	1648 aa		4.18	□□□□□ -1.74
CHS2	YBR038W	MHP1	P43638	1398 aa		4.17	□□□□□ -1.74
CHS2	YBR038W	BUD3	P25558	1636 aa		4.17	□□□□□ -1.74
CHS2	YBR038W	YGL015C	P33199	130 aa		4.16	□□□□□ -1.74
CHS2	YBR038W	SPT7	P35177	1332 aa		4.16	□□□□□ -1.74
CHS2	YBR038W	YSP2	Q06681	1438 aa		4.16	□□□□□ -1.74
CHS2	YBR038W	YRF1-1	P0CX20	1796 aa		4.15	□□□□□ -1.74
CHS2	YBR038W	YRF1-5	P0CX21	1796 aa		4.15	□□□□□ -1.74
CHS2	YBR038W	YRF1-8	P0CX22	1796 aa		4.15	□□□□□ -1.74
CHS2	YBR038W	CHC1	P22137	1653 aa	Known RBP	4.15	□□□□□ -1.74
CHS2	YBR038W	MET10	P39692	1035 aa		4.14	□□□□□ -1.75
CHS2	YBR038W	MET5	P47169	1442 aa		4.13	□□□□□ -1.75
CHS2	YBR038W	PRS1	P32895	427 aa	Known RBP	4.13	□□□□□ -1.75
CHS2	YBR038W	NUP157	P40064	1391 aa	Known RBP	4.13	□□□□□ -1.75
CHS2	YBR038W	NOP7	P53261	605 aa	Known RBP	4.13	□□□□□ -1.75
CHS2	YBR038W	PTP3	P40048	928 aa		4.12	□□□□□ -1.75
CHS2	YBR038W	UBP10	P53874	792 aa	Predicted RBP	4.12	□□□□□ -1.75
CHS2	YBR038W	SEC7	P11075	2009 aa	Known RBP	4.12	□□□□□ -1.75
CHS2	YBR038W	SCT1	P32784	759 aa		4.12	□□□□□ -1.75
CHS2	YBR038W	BUD21	Q08492	214 aa	Predicted RBP	4.12	□□□□□ -1.75
CHS2	YBR038W	RAV1	P47104	1357 aa		4.11	□□□□□ -1.75
CHS2	YBR038W	LTE1	P07866	1435 aa		4.11	□□□□□ -1.75
CHS2	YBR038W	BDF1	P35817	686 aa		4.11	□□□□□ -1.75
CHS2	YBR038W	PSD2	P53037	1138 aa	Known RBP	4.11	□□□□□ -1.75
CHS2	YBR038W	IOC4	Q04213	475 aa		4.11	□□□□□ -1.75
CHS2	YBR038W	PAF1	P38351	445 aa		4.1	□□□□□ -1.75
CHS2	YBR038W	RTC1	Q08281	1341 aa		4.1	□□□□□ -1.75
CHS2	YBR038W	DMA1	P38823	416 aa		4.09	□□□□□ -1.75
CHS2	YBR038W	SCY1	P53009	804 aa		4.09	□□□□□ -1.75
CHS2	YBR038W	EPS1	P40557	701 aa		4.09	□□□□□ -1.75
CHS2	YBR038W	CKB1	P43639	278 aa		4.08	□□□□□ -1.76
CHS2	YBR038W	YAH1	Q12184	172 aa	Known RBP	4.08	□□□□□ -1.76
CHS2	YBR038W	NUP188	P52593	1655 aa	Known RBP	4.08	□□□□□ -1.76
CHS2	YBR038W	SSP1	P38871	571 aa		4.08	□□□□□ -1.76
CHS2	YBR038W	RSM7	P47150	247 aa		4.08	□□□□□ -1.76
CHS2	YBR038W	CST9	Q06032	482 aa		4.08	□□□□□ -1.76
CHS2	YBR038W	TRM3	Q07527	1436 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms