RNA–Protein interactions for RNA: YBL111C

YBL111C, Transcript of Helicase-like protein encoded within the telomeric Y' element, yeast

Gene YBL111C, Length 2,004 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBL111C	YBL111C	VTH1	P40438	1549 aa		11.91	□□□□□ -0.5
YBL111C	YBL111C	VTH2	P40890	1549 aa		11.91	□□□□□ -0.5
YBL111C	YBL111C	MIF2	P35201	549 aa		11.89	□□□□□ -0.51
YBL111C	YBL111C	RPO21	P04050	1733 aa	Known RBP	11.89	□□□□□ -0.51
YBL111C	YBL111C	VPS15	P22219	1454 aa		11.88	□□□□□ -0.51
YBL111C	YBL111C	MYO4	P32492	1471 aa		11.86	□□□□□ -0.51
YBL111C	YBL111C	ITT1	Q04638	464 aa		11.84	□□□□□ -0.51
YBL111C	YBL111C	YTA7	P40340	1379 aa		11.82	□□□□□ -0.52
YBL111C	YBL111C	DRS2	P39524	1355 aa		11.81	□□□□□ -0.52
YBL111C	YBL111C	MMS1	Q06211	1407 aa		11.77	□□□□□ -0.53
YBL111C	YBL111C	SNQ2	P32568	1501 aa	Known RBP	11.75	□□□□□ -0.53
YBL111C	YBL111C	SNT2	P53127	1403 aa		11.74	□□□□□ -0.53
YBL111C	YBL111C	STH1	P32597	1359 aa		11.71	□□□□□ -0.53
YBL111C	YBL111C	ABP1	P15891	592 aa	Known RBP	11.69	□□□□□ -0.54
YBL111C	YBL111C	NUP170	P38181	1502 aa		11.68	□□□□□ -0.54
YBL111C	YBL111C	SPO14	P36126	1683 aa		11.65	□□□□□ -0.54
YBL111C	YBL111C	IRC20	Q06554	1556 aa		11.65	□□□□□ -0.55
YBL111C	YBL111C	MLP2	P40457	1679 aa		11.64	□□□□□ -0.55
YBL111C	YBL111C	MET10	P39692	1035 aa		11.64	□□□□□ -0.55
YBL111C	YBL111C	ULS1	Q08562	1619 aa		11.63	□□□□□ -0.55
YBL111C	YBL111C	DNF2	Q12675	1612 aa		11.62	□□□□□ -0.55
YBL111C	YBL111C	PDR12	Q02785	1511 aa		11.62	□□□□□ -0.55
YBL111C	YBL111C	RTT106	P40161	455 aa		11.57	□□□□□ -0.56
YBL111C	YBL111C	DOP1	Q03921	1698 aa		11.53	□□□□□ -0.56
YBL111C	YBL111C	GDB1	Q06625	1536 aa		11.53	□□□□□ -0.56
YBL111C	YBL111C	TRM3	Q07527	1436 aa		11.53	□□□□□ -0.56
YBL111C	YBL111C	IQG1	Q12280	1495 aa		11.5	□□□□□ -0.57
YBL111C	YBL111C	BUD3	P25558	1636 aa		11.5	□□□□□ -0.57
YBL111C	YBL111C	PDR15	Q04182	1529 aa	Known RBP	11.48	□□□□□ -0.57
YBL111C	YBL111C	PDR10	P51533	1564 aa		11.47	□□□□□ -0.57
YBL111C	YBL111C	YFR006W	P43590	535 aa		11.45	□□□□□ -0.58
YBL111C	YBL111C	NUP157	P40064	1391 aa	Known RBP	11.45	□□□□□ -0.58
YBL111C	YBL111C	TAF7	Q05021	590 aa		11.43	□□□□□ -0.58
YBL111C	YBL111C	SAS10	Q12136	610 aa	Predicted RBP	11.36	□□□□□ -0.59
YBL111C	YBL111C	CHC1	P22137	1653 aa	Known RBP	11.36	□□□□□ -0.59
YBL111C	YBL111C	YOR093C	Q12275	1648 aa		11.36	□□□□□ -0.59
YBL111C	YBL111C	CAT8	P39113	1433 aa		11.31	□□□□□ -0.6
YBL111C	YBL111C	ARO1	P08566	1588 aa	Known RBP	11.3	□□□□□ -0.6
YBL111C	YBL111C	SEC7	P11075	2009 aa	Known RBP	11.26	□□□□□ -0.61
YBL111C	YBL111C	YBT1	P32386	1661 aa		11.25	□□□□□ -0.61
YBL111C	YBL111C	IFH1	P39520	1085 aa		11.25	□□□□□ -0.61
YBL111C	YBL111C	GEA1	P47102	1408 aa	Predicted RBP	11.25	□□□□□ -0.61
YBL111C	YBL111C	DNF3	Q12674	1656 aa		11.21	□□□□□ -0.62
YBL111C	YBL111C	TY3B-G	Q99315	1547 aa		11.2	□□□□□ -0.62
YBL111C	YBL111C	YSP2	Q06681	1438 aa		11.14	□□□□□ -0.63
YBL111C	YBL111C	BNR1	P40450	1375 aa		11.12	□□□□□ -0.63
YBL111C	YBL111C	YAP3	P38749	330 aa		11.1	□□□□□ -0.63
YBL111C	YBL111C	CKB1	P43639	278 aa		11.1	□□□□□ -0.63
YBL111C	YBL111C	URN1	Q06525	465 aa	Known RBP	11.06	□□□□□ -0.64
YBL111C	YBL111C	SRB8	P25648	1427 aa		11.01	□□□□□ -0.65
YBL111C	YBL111C	MAK10	Q02197	733 aa		10.97	□□□□□ -0.65
YBL111C	YBL111C	HAP1	P0CE41	1502 aa		10.95	□□□□□ -0.66
YBL111C	YBL111C	USO1	P25386	1790 aa		10.92	□□□□□ -0.66
YBL111C	YBL111C	BFR2	Q06631	534 aa	Known RBP	10.91	□□□□□ -0.66
YBL111C	YBL111C	NUP188	P52593	1655 aa	Known RBP	10.9	□□□□□ -0.66
YBL111C	YBL111C	BUD21	Q08492	214 aa	Predicted RBP	10.87	□□□□□ -0.67
YBL111C	YBL111C	IML1	P47170	1584 aa		10.87	□□□□□ -0.67
YBL111C	YBL111C	TY1B-NL2	Q99337	1749 aa	Known RBP	10.87	□□□□□ -0.67
YBL111C	YBL111C	IPL1	P38991	367 aa		10.85	□□□□□ -0.67
YBL111C	YBL111C	VMR1	P38735	1592 aa		10.8	□□□□□ -0.68
YBL111C	YBL111C	YMR196W	Q04336	1088 aa		10.79	□□□□□ -0.68
YBL111C	YBL111C	TYS1	P36421	394 aa	Known RBP	10.73	□□□□□ -0.69
YBL111C	YBL111C	IKI3	Q06706	1349 aa	Known RBP	10.72	□□□□□ -0.69
YBL111C	YBL111C	PDR5	P33302	1511 aa	Known RBP	10.71	□□□□□ -0.7
YBL111C	YBL111C	THI12	P42883	340 aa		10.68	□□□□□ -0.7
YBL111C	YBL111C	THI5	P43534	340 aa		10.68	□□□□□ -0.7
YBL111C	YBL111C	THI11	P47183	340 aa		10.68	□□□□□ -0.7
YBL111C	YBL111C	THI13	Q07748	340 aa		10.68	□□□□□ -0.7
YBL111C	YBL111C	GCN2	P15442	1659 aa		10.66	□□□□□ -0.7
YBL111C	YBL111C	SSM4	P40318	1319 aa		10.57	□□□□□ -0.72
YBL111C	YBL111C	PDR11	P40550	1411 aa		10.53	□□□□□ -0.72
YBL111C	YBL111C	CFT1	Q06632	1357 aa	Known RBP	10.53	□□□□□ -0.72
YBL111C	YBL111C	MRX12	P47084	519 aa		10.51	□□□□□ -0.73
YBL111C	YBL111C	NOP2	P40991	618 aa	Known RBP	10.5	□□□□□ -0.73
YBL111C	YBL111C	YAH1	Q12184	172 aa	Known RBP	10.5	□□□□□ -0.73
YBL111C	YBL111C	BCK1	Q01389	1478 aa		10.49	□□□□□ -0.73
YBL111C	YBL111C	KRE5	P22023	1365 aa		10.49	□□□□□ -0.73
YBL111C	YBL111C	NUP192	P47054	1683 aa		10.47	□□□□□ -0.73
YBL111C	YBL111C	PAF1	P38351	445 aa		10.46	□□□□□ -0.73
YBL111C	YBL111C	RIA1	P53893	1110 aa		10.46	□□□□□ -0.73
YBL111C	YBL111C	RAV1	P47104	1357 aa		10.46	□□□□□ -0.74
YBL111C	YBL111C	YNR029C	P53729	429 aa	Known RBP	10.44	□□□□□ -0.74
YBL111C	YBL111C	PTP3	P40048	928 aa		10.41	□□□□□ -0.74
YBL111C	YBL111C	RTC1	Q08281	1341 aa		10.37	□□□□□ -0.75
YBL111C	YBL111C	ALD4	P46367	519 aa	Known RBP	10.35	□□□□□ -0.75
YBL111C	YBL111C	GLN1	P32288	370 aa	Known RBP	10.34	□□□□□ -0.75
YBL111C	YBL111C	YIL055C	P40523	627 aa	Known RBP	10.34	□□□□□ -0.75
YBL111C	YBL111C	APP1	P53933	587 aa		10.33	□□□□□ -0.76
YBL111C	YBL111C	CAB1	Q04430	367 aa		10.33	□□□□□ -0.76
YBL111C	YBL111C	RAD9	P14737	1309 aa		10.32	□□□□□ -0.76
YBL111C	YBL111C	NOP7	P53261	605 aa	Known RBP	10.31	□□□□□ -0.76
YBL111C	YBL111C	NAP1	P25293	417 aa	Known RBP	10.29	□□□□□ -0.76
YBL111C	YBL111C	TY3B-I	Q7LHG5	1498 aa	Known RBP	10.28	□□□□□ -0.76
YBL111C	YBL111C	YRF1-2	P40105	1681 aa		10.28	□□□□□ -0.76
YBL111C	YBL111C	REB1	P21538	810 aa		10.27	□□□□□ -0.77
YBL111C	YBL111C	RRP5	Q05022	1729 aa	Known RBP	10.25	□□□□□ -0.77
YBL111C	YBL111C	ENT1	Q12518	454 aa		10.24	□□□□□ -0.77
YBL111C	YBL111C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.23	□□□□□ -0.77	not detected
YBL111C	YBL111C	YMR074C	Q04773	145 aa		10.21	□□□□□ -0.77
YBL111C	YBL111C	ESL2	P36168	1195 aa		10.21	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms