RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W SAS10Q12136 610 aaPredicted RBP9.88□□□□□ -0.83
PTC3YBL056W NTE1Q04958 1679 aa9.88□□□□□ -0.83
PTC3YBL056W BFR2Q06631 534 aaKnown RBP9.87□□□□□ -0.83
PTC3YBL056W RPO21P04050 1733 aaKnown RBP9.85□□□□□ -0.83
PTC3YBL056W YRF1-1P0CX20 1796 aa9.82□□□□□ -0.84
PTC3YBL056W YRF1-5P0CX21 1796 aa9.82□□□□□ -0.84
PTC3YBL056W YRF1-8P0CX22 1796 aa9.82□□□□□ -0.84
PTC3YBL056W ULS1Q08562 1619 aa9.81□□□□□ -0.84
PTC3YBL056W PDR15Q04182 1529 aaKnown RBP9.8□□□□□ -0.84
PTC3YBL056W LTE1P07866 1435 aa9.8□□□□□ -0.84
PTC3YBL056W MLP2P40457 1679 aa9.79□□□□□ -0.84
PTC3YBL056W TAF7Q05021 590 aa9.79□□□□□ -0.84
PTC3YBL056W VPS15P22219 1454 aa9.77□□□□□ -0.85
PTC3YBL056W GEA2P39993 1459 aaKnown RBP9.75□□□□□ -0.85
PTC3YBL056W RTT106P40161 455 aa9.73□□□□□ -0.85
PTC3YBL056W MET10P39692 1035 aa9.72□□□□□ -0.85
PTC3YBL056W DIP2Q12220 943 aaPredicted RBP9.71□□□□□ -0.86
PTC3YBL056W PDR12Q02785 1511 aa9.7□□□□□ -0.86
PTC3YBL056W IFH1P39520 1085 aa9.7□□□□□ -0.86
PTC3YBL056W IRC20Q06554 1556 aa9.7□□□□□ -0.86
PTC3YBL056W GEA1P47102 1408 aaPredicted RBP9.69□□□□□ -0.86
PTC3YBL056W SPO14P36126 1683 aa9.68□□□□□ -0.86
PTC3YBL056W BNI1P41832 1953 aa9.65□□□□□ -0.86
PTC3YBL056W GDB1Q06625 1536 aa9.64□□□□□ -0.87
PTC3YBL056W TY3B-GQ99315 1547 aa9.64□□□□□ -0.87
PTC3YBL056W ITT1Q04638 464 aa9.63□□□□□ -0.87
PTC3YBL056W NUP157P40064 1391 aaKnown RBP9.62□□□□□ -0.87
PTC3YBL056W DRS2P39524 1355 aa9.62□□□□□ -0.87
PTC3YBL056W PDR10P51533 1564 aa9.6□□□□□ -0.87
PTC3YBL056W CAT8P39113 1433 aa9.59□□□□□ -0.87
PTC3YBL056W NUP170P38181 1502 aa9.58□□□□□ -0.88
PTC3YBL056W YBT1P32386 1661 aa9.56□□□□□ -0.88
PTC3YBL056W IQG1Q12280 1495 aa9.56□□□□□ -0.88
PTC3YBL056W AVT3P36062 692 aa9.56□□□□□ -0.88
PTC3YBL056W MMS1Q06211 1407 aa9.51□□□□□ -0.89
PTC3YBL056W BUD3P25558 1636 aa9.5□□□□□ -0.89
PTC3YBL056W ARO1P08566 1588 aaKnown RBP9.5□□□□□ -0.89
PTC3YBL056W IKI3Q06706 1349 aaKnown RBP9.47□□□□□ -0.89
PTC3YBL056W TRM3Q07527 1436 aa9.47□□□□□ -0.89
PTC3YBL056W YSP2Q06681 1438 aa9.46□□□□□ -0.89
PTC3YBL056W DOP1Q03921 1698 aa9.45□□□□□ -0.9
PTC3YBL056W CKB1P43639 278 aa9.45□□□□□ -0.9
PTC3YBL056W SRB8P25648 1427 aa9.41□□□□□ -0.9
PTC3YBL056W SEC7P11075 2009 aaKnown RBP9.39□□□□□ -0.91
PTC3YBL056W SSM4P40318 1319 aa9.38□□□□□ -0.91
PTC3YBL056W DNF2Q12675 1612 aa9.37□□□□□ -0.91
PTC3YBL056W BNR1P40450 1375 aa9.37□□□□□ -0.91
PTC3YBL056W CHC1P22137 1653 aaKnown RBP9.36□□□□□ -0.91
PTC3YBL056W FAP1P53971 965 aa9.34□□□□□ -0.91
PTC3YBL056W ISW2Q08773 1120 aa9.34□□□□□ -0.91
PTC3YBL056W ABP1P15891 592 aaKnown RBP9.31□□□□□ -0.92
PTC3YBL056W TFA1P36100 482 aa9.3□□□□□ -0.92
PTC3YBL056W BUD21Q08492 214 aaPredicted RBP9.29□□□□□ -0.92
PTC3YBL056W YOR093CQ12275 1648 aa9.24□□□□□ -0.93
PTC3YBL056W MIF2P35201 549 aa9.21□□□□□ -0.94
PTC3YBL056W YAP3P38749 330 aa9.19□□□□□ -0.94
PTC3YBL056W VMR1P38735 1592 aa9.16□□□□□ -0.94
PTC3YBL056W GCN2P15442 1659 aa9.15□□□□□ -0.94
PTC3YBL056W NUP188P52593 1655 aaKnown RBP9.15□□□□□ -0.94
PTC3YBL056W PRI1P10363 409 aa9.14□□□□□ -0.95
PTC3YBL056W URN1Q06525 465 aaKnown RBP9.14□□□□□ -0.95
PTC3YBL056W DNF3Q12674 1656 aa9.13□□□□□ -0.95
PTC3YBL056W PDR5P33302 1511 aaKnown RBP9.13□□□□□ -0.95
PTC3YBL056W IPL1P38991 367 aa9.12□□□□□ -0.95
PTC3YBL056W RPG1P38249 964 aaKnown RBP9.11□□□□□ -0.95
PTC3YBL056W IML1P47170 1584 aa9.1□□□□□ -0.95
PTC3YBL056W TYS1P36421 394 aaKnown RBP9.09□□□□□ -0.95
PTC3YBL056W PDR11P40550 1411 aa9.09□□□□□ -0.95
PTC3YBL056W HAP1P0CE41 1502 aa9.05□□□□□ -0.96
PTC3YBL056W MAK10Q02197 733 aa9.04□□□□□ -0.96
PTC3YBL056W RAV1P47104 1357 aa9.01□□□□□ -0.97
PTC3YBL056W AAD16Q02895 342 aa9.01□□□□□ -0.97
PTC3YBL056W PAF1P38351 445 aa9□□□□□ -0.97
PTC3YBL056W NOP7P53261 605 aaKnown RBP8.97□□□□□ -0.97
PTC3YBL056W RTC1Q08281 1341 aa8.95□□□□□ -0.98
PTC3YBL056W YFR006WP43590 535 aa8.94□□□□□ -0.98
PTC3YBL056W NUP192P47054 1683 aa8.89□□□□□ -0.99
PTC3YBL056W BCK1Q01389 1478 aa8.87□□□□□ -0.99
PTC3YBL056W USO1P25386 1790 aa8.87□□□□□ -0.99
PTC3YBL056W TY1B-NL2Q99337 1749 aaKnown RBP8.86□□□□□ -0.99
PTC3YBL056W KRE5P22023 1365 aa8.85□□□□□ -0.99
PTC3YBL056W RAD9P14737 1309 aa8.85□□□□□ -0.99
PTC3YBL056W CFT1Q06632 1357 aaKnown RBP8.84□□□□□ -0.99
PTC3YBL056W ALD4P46367 519 aaKnown RBP8.84□□□□□ -0.99
PTC3YBL056W YMR196WQ04336 1088 aa8.83□□□□□ -1
PTC3YBL056W CAB1Q04430 367 aa8.82□□□□□ -1
PTC3YBL056W RPL17AP05740 184 aaKnown RBP8.81□□□□□ -1
PTC3YBL056W TAF5P38129 798 aa8.81□□□□□ -1
PTC3YBL056W RPL17BP46990 184 aaKnown RBP8.81□□□□□ -1
PTC3YBL056W MRX12P47084 519 aa8.81□□□□□ -1
PTC3YBL056W RIA1P53893 1110 aa8.81□□□□□ -1
PTC3YBL056W ESL2P36168 1195 aa8.8□□□□□ -1
PTC3YBL056W THI12P42883 340 aa8.8□□□□□ -1
PTC3YBL056W THI5P43534 340 aa8.8□□□□□ -1
PTC3YBL056W THI11P47183 340 aa8.8□□□□□ -1
PTC3YBL056W THI13Q07748 340 aa8.8□□□□□ -1
PTC3YBL056W TY3B-IQ7LHG5 1498 aaKnown RBP8.77□□□□□ -1.01
PTC3YBL056W YNR029CP53729 429 aaKnown RBP8.77□□□□□ -1.01
PTC3YBL056W REB1P21538 810 aa8.76□□□□□ -1.01
PTC3YBL056W TAF8Q03750 510 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms