RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
SAMMSON-226ENST00000642089 MYCNP04198 464 aaPredicted RBP9.07□□□□□ -0.96
SAMMSON-226ENST00000642089 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
SAMMSON-226ENST00000642089 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
SAMMSON-226ENST00000642089 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
SAMMSON-226ENST00000642089 NESP48681 1621 aa9.04□□□□□ -0.96
SAMMSON-226ENST00000642089 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
SAMMSON-226ENST00000642089 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
SAMMSON-226ENST00000642089 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
SAMMSON-226ENST00000642089 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
SAMMSON-226ENST00000642089 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
SAMMSON-226ENST00000642089 TOP2AP11388 1531 aaKnown RBP8.95□□□□□ -0.98
SAMMSON-226ENST00000642089 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
SAMMSON-226ENST00000642089 KIF21AQ7Z4S6 1674 aa8.92□□□□□ -0.98
SAMMSON-226ENST00000642089 FARP1Q9Y4F1 1045 aaPredicted RBP8.91□□□□□ -0.98
SAMMSON-226ENST00000642089 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
SAMMSON-226ENST00000642089 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
SAMMSON-226ENST00000642089 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
SAMMSON-226ENST00000642089 PDS5BQ9NTI5 1447 aa8.89□□□□□ -0.99
SAMMSON-226ENST00000642089 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
SAMMSON-226ENST00000642089 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
SAMMSON-226ENST00000642089 GALR2O43603 387 aaPredicted RBP8.86□□□□□ -0.99
SAMMSON-226ENST00000642089 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
SAMMSON-226ENST00000642089 THOC2Q8NI27 1593 aaKnown RBP8.86□□□□□ -0.99
SAMMSON-226ENST00000642089 C7P10643 843 aa8.86□□□□□ -0.99
SAMMSON-226ENST00000642089 CUX2O14529 1486 aa8.85□□□□□ -0.99
SAMMSON-226ENST00000642089 SLC39A7Q92504 469 aa8.85□□□□□ -0.99
SAMMSON-226ENST00000642089 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
SAMMSON-226ENST00000642089 CFTRP13569 1480 aa8.84□□□□□ -0.99
SAMMSON-226ENST00000642089 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
SAMMSON-226ENST00000642089 CEP164Q9UPV0 1460 aa8.82□□□□□ -1
SAMMSON-226ENST00000642089 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
SAMMSON-226ENST00000642089 POTEJP0CG39 1038 aa8.78□□□□□ -1
SAMMSON-226ENST00000642089 FBLN2P98095 1184 aa8.78□□□□□ -1
SAMMSON-226ENST00000642089 PRDM2Q13029 1718 aa8.77□□□□□ -1.01
SAMMSON-226ENST00000642089 WDR62O43379 1518 aa8.76□□□□□ -1.01
SAMMSON-226ENST00000642089 URB2Q14146 1524 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-226ENST00000642089 PELP1Q8IZL8 1130 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-226ENST00000642089 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
SAMMSON-226ENST00000642089 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
SAMMSON-226ENST00000642089 SLC24A1O60721 1099 aa8.73□□□□□ -1.01
SAMMSON-226ENST00000642089 ATF5Q9Y2D1 282 aaPredicted RBP8.71□□□□□ -1.02
SAMMSON-226ENST00000642089 KCNA4P22459 653 aa8.7□□□□□ -1.02
SAMMSON-226ENST00000642089 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
SAMMSON-226ENST00000642089 TOPBP1Q92547 1522 aa8.68□□□□□ -1.02
SAMMSON-226ENST00000642089 ASTLQ6HA08 431 aaPredicted RBP8.67□□□□□ -1.02
SAMMSON-226ENST00000642089 DNAJC5Q9H3Z4 198 aa8.67□□□□□ -1.02
SAMMSON-226ENST00000642089 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
SAMMSON-226ENST00000642089 ZNF608Q9ULD9 1512 aaPredicted RBP8.64□□□□□ -1.03
SAMMSON-226ENST00000642089 ABCC8Q09428 1581 aa8.62□□□□□ -1.03
SAMMSON-226ENST00000642089 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
SAMMSON-226ENST00000642089 CUX1P39880 1505 aa8.61□□□□□ -1.03
SAMMSON-226ENST00000642089 POLA1P09884 1462 aaPredicted RBP8.61□□□□□ -1.03
SAMMSON-226ENST00000642089 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
SAMMSON-226ENST00000642089 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
SAMMSON-226ENST00000642089 ST18O60284 1047 aa8.6□□□□□ -1.03
SAMMSON-226ENST00000642089 FGD5Q6ZNL6 1462 aa8.59□□□□□ -1.03
SAMMSON-226ENST00000642089 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.03
SAMMSON-226ENST00000642089 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
SAMMSON-226ENST00000642089 TARBP1Q13395 1621 aaKnown RBP8.58□□□□□ -1.04
SAMMSON-226ENST00000642089 SOGA1O94964 1423 aa8.58□□□□□ -1.04
SAMMSON-226ENST00000642089 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
SAMMSON-226ENST00000642089 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
SAMMSON-226ENST00000642089 SYNJ1O43426 1573 aa8.53□□□□□ -1.04
SAMMSON-226ENST00000642089 WRNQ14191 1432 aaPredicted RBP eCLIP8.53□□□□□ -1.04
SAMMSON-226ENST00000642089 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
SAMMSON-226ENST00000642089 TOP2BQ02880 1626 aa8.5□□□□□ -1.05
SAMMSON-226ENST00000642089 CHD1O14646 1710 aa8.5□□□□□ -1.05
SAMMSON-226ENST00000642089 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
SAMMSON-226ENST00000642089 WDR97A6NE52 1622 aa8.49□□□□□ -1.05
SAMMSON-226ENST00000642089 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
SAMMSON-226ENST00000642089 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
SAMMSON-226ENST00000642089 PBRM1Q86U86 1689 aa8.47□□□□□ -1.05
SAMMSON-226ENST00000642089 GRIN2BQ13224 1484 aa8.47□□□□□ -1.05
SAMMSON-226ENST00000642089 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
SAMMSON-226ENST00000642089 ABCA10Q8WWZ4 1543 aa8.47□□□□□ -1.05
SAMMSON-226ENST00000642089 CHMP7Q8WUX9 453 aaPredicted RBP8.46□□□□□ -1.06
SAMMSON-226ENST00000642089 ABCA5Q8WWZ7 1642 aa8.45□□□□□ -1.06
SAMMSON-226ENST00000642089 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
SAMMSON-226ENST00000642089 SLAIN1Q8ND83 568 aa8.42□□□□□ -1.06
SAMMSON-226ENST00000642089 SYNJ2O15056 1496 aa8.41□□□□□ -1.06
SAMMSON-226ENST00000642089 SNPHO15079 494 aa8.41□□□□□ -1.06
SAMMSON-226ENST00000642089 RIMBP3CA6NJZ7 1639 aa8.41□□□□□ -1.06
SAMMSON-226ENST00000642089 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
SAMMSON-226ENST00000642089 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
SAMMSON-226ENST00000642089 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
SAMMSON-226ENST00000642089 MS4A3Q96HJ5 214 aa8.4□□□□□ -1.06
SAMMSON-226ENST00000642089 SLC4A1APQ9BWU0 796 aaKnown RBP8.4□□□□□ -1.06
SAMMSON-226ENST00000642089 ARHGEF11O15085 1522 aa8.39□□□□□ -1.07
SAMMSON-226ENST00000642089 ADAMTS12P58397 1594 aa8.39□□□□□ -1.07
SAMMSON-226ENST00000642089 SEC24BO95487 1268 aa8.39□□□□□ -1.07
SAMMSON-226ENST00000642089 ATN1P54259 1190 aaPredicted RBP8.38□□□□□ -1.07
SAMMSON-226ENST00000642089 CYB5RLQ6IPT4 315 aa8.36□□□□□ -1.07
SAMMSON-226ENST00000642089 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
SAMMSON-226ENST00000642089 ERICH3Q5RHP9 1530 aa8.36□□□□□ -1.07
SAMMSON-226ENST00000642089 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
SAMMSON-226ENST00000642089 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
SAMMSON-226ENST00000642089 FHAD1B1AJZ9 1412 aa8.35□□□□□ -1.07
SAMMSON-226ENST00000642089 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
SAMMSON-226ENST00000642089 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms