RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
SCARB2-225ENST00000640900 GOLGA3Q08378 1498 aa15□□□□□ -0.01
SCARB2-225ENST00000640900 CHD1O14646 1710 aa15□□□□□ -0.01
SCARB2-225ENST00000640900 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
SCARB2-225ENST00000640900 KIAA0586Q9BVV6 1533 aa14.93□□□□□ -0.02
SCARB2-225ENST00000640900 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
SCARB2-225ENST00000640900 FBLN2P98095 1184 aa14.92□□□□□ -0.02
SCARB2-225ENST00000640900 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
SCARB2-225ENST00000640900 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
SCARB2-225ENST00000640900 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
SCARB2-225ENST00000640900 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
SCARB2-225ENST00000640900 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
SCARB2-225ENST00000640900 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
SCARB2-225ENST00000640900 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
SCARB2-225ENST00000640900 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
SCARB2-225ENST00000640900 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
SCARB2-225ENST00000640900 SAMD9Q5K651 1589 aa14.78□□□□□ -0.04
SCARB2-225ENST00000640900 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
SCARB2-225ENST00000640900 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
SCARB2-225ENST00000640900 EFCAB5A4FU69 1503 aa14.76□□□□□ -0.05
SCARB2-225ENST00000640900 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
SCARB2-225ENST00000640900 ARHGAP35Q9NRY4 1499 aa14.75□□□□□ -0.05
SCARB2-225ENST00000640900 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
SCARB2-225ENST00000640900 CLIP1P30622 1438 aa14.73□□□□□ -0.05
SCARB2-225ENST00000640900 MSH5O43196 834 aa14.72□□□□□ -0.05
SCARB2-225ENST00000640900 KIAA0556O60303 1618 aa14.72□□□□□ -0.05
SCARB2-225ENST00000640900 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
SCARB2-225ENST00000640900 CARMIL2Q6F5E8 1435 aa14.69□□□□□ -0.06
SCARB2-225ENST00000640900 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
SCARB2-225ENST00000640900 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
SCARB2-225ENST00000640900 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
SCARB2-225ENST00000640900 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
SCARB2-225ENST00000640900 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
SCARB2-225ENST00000640900 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
SCARB2-225ENST00000640900 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
SCARB2-225ENST00000640900 PTPRGP23470 1445 aa14.6□□□□□ -0.07
SCARB2-225ENST00000640900 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
SCARB2-225ENST00000640900 RANGAP1P46060 587 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-225ENST00000640900 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
SCARB2-225ENST00000640900 ABCA8O94911 1581 aa14.58□□□□□ -0.08
SCARB2-225ENST00000640900 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
SCARB2-225ENST00000640900 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
SCARB2-225ENST00000640900 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
SCARB2-225ENST00000640900 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
SCARB2-225ENST00000640900 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
SCARB2-225ENST00000640900 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.08
SCARB2-225ENST00000640900 ABCC2Q92887 1545 aa14.51□□□□□ -0.09
SCARB2-225ENST00000640900 RAPGEF6Q8TEU7 1601 aa14.51□□□□□ -0.09
SCARB2-225ENST00000640900 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
SCARB2-225ENST00000640900 PCF11O94913 1555 aaKnown RBP14.5□□□□□ -0.09
SCARB2-225ENST00000640900 ADCY10Q96PN6 1610 aa14.49□□□□□ -0.09
SCARB2-225ENST00000640900 KDM5BQ9UGL1 1544 aa14.48□□□□□ -0.09
SCARB2-225ENST00000640900 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
SCARB2-225ENST00000640900 ATP10BO94823 1461 aa14.45□□□□□ -0.1
SCARB2-225ENST00000640900 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
SCARB2-225ENST00000640900 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
SCARB2-225ENST00000640900 LRRIQ1Q96JM4 1722 aa14.45□□□□□ -0.1
SCARB2-225ENST00000640900 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
SCARB2-225ENST00000640900 CCDC18Q5T9S5 1454 aa14.43□□□□□ -0.1
SCARB2-225ENST00000640900 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-225ENST00000640900 TIAM1Q13009 1591 aa14.39□□□□□ -0.11
SCARB2-225ENST00000640900 ZCCHC11Q5TAX3 1644 aaKnown RBP14.38□□□□□ -0.11
SCARB2-225ENST00000640900 CDK13Q14004 1512 aaKnown RBP14.38□□□□□ -0.11
SCARB2-225ENST00000640900 CFAP43Q8NDM7 1665 aa14.38□□□□□ -0.11
SCARB2-225ENST00000640900 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
SCARB2-225ENST00000640900 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
SCARB2-225ENST00000640900 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
SCARB2-225ENST00000640900 TROQ12816 1431 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-225ENST00000640900 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-225ENST00000640900 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-225ENST00000640900 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
SCARB2-225ENST00000640900 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-225ENST00000640900 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
SCARB2-225ENST00000640900 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
SCARB2-225ENST00000640900 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCARB2-225ENST00000640900 EHBP1L1Q8N3D4 1523 aa14.29□□□□□ -0.12
SCARB2-225ENST00000640900 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
SCARB2-225ENST00000640900 APLP2Q06481 763 aa14.26□□□□□ -0.13
SCARB2-225ENST00000640900 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
SCARB2-225ENST00000640900 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
SCARB2-225ENST00000640900 GLI2P10070 1586 aa14.23□□□□□ -0.13
SCARB2-225ENST00000640900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-225ENST00000640900 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
SCARB2-225ENST00000640900 KIF14Q15058 1648 aa14.23□□□□□ -0.13
SCARB2-225ENST00000640900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.13
SCARB2-225ENST00000640900 NCOA2Q15596 1464 aa14.21□□□□□ -0.13
SCARB2-225ENST00000640900 ABCA9Q8IUA7 1624 aa14.21□□□□□ -0.13
SCARB2-225ENST00000640900 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.14
SCARB2-225ENST00000640900 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
SCARB2-225ENST00000640900 ARAP3Q8WWN8 1544 aa14.18□□□□□ -0.14
SCARB2-225ENST00000640900 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
SCARB2-225ENST00000640900 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
SCARB2-225ENST00000640900 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
SCARB2-225ENST00000640900 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
SCARB2-225ENST00000640900 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
SCARB2-225ENST00000640900 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
SCARB2-225ENST00000640900 PLCH2O75038 1416 aa14.15□□□□□ -0.14
SCARB2-225ENST00000640900 CDC42BPAQ5VT25 1732 aa14.14□□□□□ -0.15
SCARB2-225ENST00000640900 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
SCARB2-225ENST00000640900 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms