RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
GFAP-237ENST00000640552 SIN3AQ96ST3 1273 aa20.37■□□□□ 0.85
GFAP-237ENST00000640552 HIRIP3Q9BW71 556 aaPredicted RBP20.37■□□□□ 0.85
GFAP-237ENST00000640552 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
GFAP-237ENST00000640552 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
GFAP-237ENST00000640552 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
GFAP-237ENST00000640552 MTUS2Q5JR59 1369 aa20.31■□□□□ 0.84
GFAP-237ENST00000640552 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
GFAP-237ENST00000640552 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
GFAP-237ENST00000640552 PDS5BQ9NTI5 1447 aa20.28■□□□□ 0.84
GFAP-237ENST00000640552 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
GFAP-237ENST00000640552 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
GFAP-237ENST00000640552 RRP7BPQ9NSQ0 103 aa20.22■□□□□ 0.83
GFAP-237ENST00000640552 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
GFAP-237ENST00000640552 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
GFAP-237ENST00000640552 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
GFAP-237ENST00000640552 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
GFAP-237ENST00000640552 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
GFAP-237ENST00000640552 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
GFAP-237ENST00000640552 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
GFAP-237ENST00000640552 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
GFAP-237ENST00000640552 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
GFAP-237ENST00000640552 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
GFAP-237ENST00000640552 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
GFAP-237ENST00000640552 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
GFAP-237ENST00000640552 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
GFAP-237ENST00000640552 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.81
GFAP-237ENST00000640552 PCF11O94913 1555 aaKnown RBP20.08■□□□□ 0.81
GFAP-237ENST00000640552 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.8
GFAP-237ENST00000640552 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
GFAP-237ENST00000640552 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
GFAP-237ENST00000640552 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
GFAP-237ENST00000640552 FOXD1Q16676 465 aa20.01■□□□□ 0.79
GFAP-237ENST00000640552 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
GFAP-237ENST00000640552 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
GFAP-237ENST00000640552 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
GFAP-237ENST00000640552 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
GFAP-237ENST00000640552 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
GFAP-237ENST00000640552 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
GFAP-237ENST00000640552 FYCO1Q9BQS8 1478 aa19.93■□□□□ 0.78
GFAP-237ENST00000640552 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
GFAP-237ENST00000640552 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
GFAP-237ENST00000640552 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.78
GFAP-237ENST00000640552 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
GFAP-237ENST00000640552 CUL7Q14999 1698 aa19.87■□□□□ 0.77
GFAP-237ENST00000640552 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
GFAP-237ENST00000640552 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
GFAP-237ENST00000640552 PPP1R15AO75807 674 aaPredicted RBP19.85■□□□□ 0.77
GFAP-237ENST00000640552 BCANQ96GW7 911 aa19.85■□□□□ 0.77
GFAP-237ENST00000640552 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.77
GFAP-237ENST00000640552 PTPRKQ15262 1439 aa19.82■□□□□ 0.76
GFAP-237ENST00000640552 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
GFAP-237ENST00000640552 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
GFAP-237ENST00000640552 CFDP1Q9UEE9 299 aaPredicted RBP19.81■□□□□ 0.76
GFAP-237ENST00000640552 ANP32CO43423 234 aa19.8■□□□□ 0.76
GFAP-237ENST00000640552 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
GFAP-237ENST00000640552 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
GFAP-237ENST00000640552 MAP3K1Q13233 1512 aa19.8■□□□□ 0.76
GFAP-237ENST00000640552 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
GFAP-237ENST00000640552 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
GFAP-237ENST00000640552 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
GFAP-237ENST00000640552 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
GFAP-237ENST00000640552 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
GFAP-237ENST00000640552 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
GFAP-237ENST00000640552 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
GFAP-237ENST00000640552 MPHOSPH9Q99550 1183 aa19.73■□□□□ 0.75
GFAP-237ENST00000640552 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
GFAP-237ENST00000640552 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
GFAP-237ENST00000640552 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
GFAP-237ENST00000640552 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
GFAP-237ENST00000640552 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
GFAP-237ENST00000640552 NAIPQ13075 1403 aa19.68■□□□□ 0.74
GFAP-237ENST00000640552 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
GFAP-237ENST00000640552 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
GFAP-237ENST00000640552 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
GFAP-237ENST00000640552 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
GFAP-237ENST00000640552 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
GFAP-237ENST00000640552 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
GFAP-237ENST00000640552 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
GFAP-237ENST00000640552 UACAQ9BZF9 1416 aa19.64■□□□□ 0.73
GFAP-237ENST00000640552 HSPA5P11021 654 aaKnown RBP19.63■□□□□ 0.73
GFAP-237ENST00000640552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.73
GFAP-237ENST00000640552 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
GFAP-237ENST00000640552 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
GFAP-237ENST00000640552 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
GFAP-237ENST00000640552 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
GFAP-237ENST00000640552 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
GFAP-237ENST00000640552 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
GFAP-237ENST00000640552 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
GFAP-237ENST00000640552 SAMD9Q5K651 1589 aa19.59■□□□□ 0.73
GFAP-237ENST00000640552 HNRNPMP52272 730 aaKnown RBP eCLIP19.59■□□□□ 0.73
GFAP-237ENST00000640552 TSPY4P0CV99 314 aa19.58■□□□□ 0.73
GFAP-237ENST00000640552 TSPY10P0CW01 314 aa19.58■□□□□ 0.73
GFAP-237ENST00000640552 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.73
GFAP-237ENST00000640552 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.73
GFAP-237ENST00000640552 FKBP8Q14318 412 aa19.58■□□□□ 0.72
GFAP-237ENST00000640552 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
GFAP-237ENST00000640552 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
GFAP-237ENST00000640552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
GFAP-237ENST00000640552 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms