RNA–Protein interactions for RNA: ENST00000640361.1

PRICKLE1-217, Transcript of prickle planar cell polarity protein 1, human

TSL 4

Gene PRICKLE1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRICKLE1-217	ENST00000640361	PBRM1	Q86U86	1689 aa		11.35	□□□□□ -0.59
PRICKLE1-217	ENST00000640361	MAP3K1	Q13233	1512 aa		11.35	□□□□□ -0.59
PRICKLE1-217	ENST00000640361	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.34	□□□□□ -0.59
PRICKLE1-217	ENST00000640361	ARAP1	Q96P48	1450 aa		11.33	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	HRC	P23327	699 aa		11.33	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	THOC2	Q8NI27	1593 aa	Known RBP	11.33	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	ARHGAP35	Q9NRY4	1499 aa		11.32	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	FHAD1	B1AJZ9	1412 aa		11.29	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	APLP2	Q06481	763 aa		11.29	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	GRIN2B	Q13224	1484 aa		11.29	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	AQR	O60306	1485 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	ZEB1	P37275	1124 aa	Predicted RBP	11.28	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	ADAMTS12	P58397	1594 aa		11.28	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	ERCC6	Q03468	1493 aa		11.27	□□□□□ -0.6
PRICKLE1-217	ENST00000640361	SAMD9	Q5K651	1589 aa		11.26	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	NCBP3	Q53F19	620 aa	Known RBP	11.26	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	TDRD9	Q8NDG6	1382 aa	Known RBP	11.25	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	CFAP43	Q8NDM7	1665 aa		11.23	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.22	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	FYCO1	Q9BQS8	1478 aa		11.22	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	EIF4G3	O43432	1585 aa	Known RBP	11.21	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	FMN1	Q68DA7	1419 aa		11.21	□□□□□ -0.61
PRICKLE1-217	ENST00000640361	TIAM1	Q13009	1591 aa		11.2	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	IQGAP2	Q13576	1575 aa		11.19	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	CASKIN1	Q8WXD9	1431 aa		11.18	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	UGGT2	Q9NYU1	1516 aa		11.17	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	NPM3	O75607	178 aa	Known RBP	11.16	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	PCF11	O94913	1555 aa	Known RBP	11.16	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	KIAA0586	Q9BVV6	1533 aa		11.15	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	RRBP1	Q9P2E9	1410 aa	Known RBP	11.15	□□□□□ -0.62
PRICKLE1-217	ENST00000640361	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.14	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	SYNJ2	O15056	1496 aa		11.13	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	GRIN2A	Q12879	1464 aa		11.13	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	SNAPC4	Q5SXM2	1469 aa		11.12	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	LRRC9	Q6ZRR7	1453 aa		11.12	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.1	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	CCDC18	Q5T9S5	1454 aa		11.1	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	FHOD3	Q2V2M9	1422 aa		11.09	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	HECW1	Q76N89	1606 aa		11.09	□□□□□ -0.63
PRICKLE1-217	ENST00000640361	RANGAP1	P46060	587 aa	Predicted RBP	11.08	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	NUP160	Q12769	1436 aa		11.08	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	KIAA0556	O60303	1618 aa		11.06	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	KANK4	Q5T7N3	995 aa	Predicted RBP	11.05	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	LRRIQ1	Q96JM4	1722 aa		11.05	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	EHBP1L1	Q8N3D4	1523 aa		11.04	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	CCNB3	Q8WWL7	1395 aa		11.04	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	CLSPN	Q9HAW4	1339 aa		11.04	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.04	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	CEP170	Q5SW79	1584 aa		11.03	□□□□□ -0.64
PRICKLE1-217	ENST00000640361	DISP1	Q96F81	1524 aa		11.02	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	CARMIL2	Q6F5E8	1435 aa		11	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	ARHGEF11	O15085	1522 aa		10.99	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.99	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	RAPGEF6	Q8TEU7	1601 aa		10.98	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	CCER1	Q8TC90	406 aa	Predicted RBP	10.98	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	EPRS	P07814	1512 aa	Known RBP	10.98	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	P3H3	Q8IVL6	736 aa		10.97	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	CNKSR2	Q8WXI2	1034 aa		10.97	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	MTUS2	Q5JR59	1369 aa		10.97	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.96	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	ZBTB22	O15209	634 aa		10.96	□□□□□ -0.65
PRICKLE1-217	ENST00000640361	SHROOM2	Q13796	1616 aa		10.95	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	PHLDB1	Q86UU1	1377 aa		10.95	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	CHD1	O14646	1710 aa		10.95	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	MYOM3	Q5VTT5	1437 aa		10.94	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	FGD6	Q6ZV73	1430 aa		10.94	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	NCOA2	Q15596	1464 aa		10.93	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.93	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	MIA2	Q96PC5	1412 aa		10.92	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	ADCY10	Q96PN6	1610 aa		10.92	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	ACIN1	Q9UKV3	1341 aa	Known RBP	10.92	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	TCOF1	Q13428	1488 aa	Known RBP	10.92	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.91	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	JPH4	Q96JJ6	628 aa		10.91	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	NUP153	P49790	1475 aa	Known RBP	10.91	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	ABCA8	O94911	1581 aa		10.9	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.9	□□□□□ -0.66
PRICKLE1-217	ENST00000640361	MAGI3	Q5TCQ9	1506 aa		10.89	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	SCAF1	Q9H7N4	1312 aa	Known RBP	10.89	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	ITSN2	Q9NZM3	1697 aa		10.89	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	PTPN23	Q9H3S7	1636 aa		10.89	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	AKNA	Q7Z591	1439 aa		10.89	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	SETD5	Q9C0A6	1442 aa		10.88	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.88	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	DHX57	Q6P158	1386 aa	Known RBP	10.86	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	TRO	Q12816	1431 aa	Predicted RBP	10.85	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	CDK13	Q14004	1512 aa	Known RBP	10.85	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	CLASP1	Q7Z460	1538 aa		10.85	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	GCC2	Q8IWJ2	1684 aa		10.84	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	HFM1	A2PYH4	1435 aa		10.84	□□□□□ -0.67
PRICKLE1-217	ENST00000640361	FBLN2	P98095	1184 aa		10.83	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	PRG4	Q92954	1404 aa	Predicted RBP	10.83	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	RAB3GAP2	Q9H2M9	1393 aa		10.82	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	PLB1	Q6P1J6	1458 aa		10.81	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	DNMT1	P26358	1616 aa	Known RBP	10.8	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	FAM50A	Q14320	339 aa	Known RBP	10.8	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	PTPRG	P23470	1445 aa		10.8	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	KIF14	Q15058	1648 aa		10.8	□□□□□ -0.68
PRICKLE1-217	ENST00000640361	TIMELESS	Q9UNS1	1208 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms