RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
HNRNPU-228ENST00000640306 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
HNRNPU-228ENST00000640306 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
HNRNPU-228ENST00000640306 IGF1RP08069 1367 aa23.95■■□□□ 1.42
HNRNPU-228ENST00000640306 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.42
HNRNPU-228ENST00000640306 RAB3GAP2Q9H2M9 1393 aa23.94■■□□□ 1.42
HNRNPU-228ENST00000640306 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
HNRNPU-228ENST00000640306 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
HNRNPU-228ENST00000640306 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
HNRNPU-228ENST00000640306 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
HNRNPU-228ENST00000640306 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
HNRNPU-228ENST00000640306 SUPT16HQ9Y5B9 1047 aaKnown RBP23.85■■□□□ 1.41
HNRNPU-228ENST00000640306 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.4
HNRNPU-228ENST00000640306 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
HNRNPU-228ENST00000640306 TIAM1Q13009 1591 aa23.78■■□□□ 1.4
HNRNPU-228ENST00000640306 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
HNRNPU-228ENST00000640306 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
HNRNPU-228ENST00000640306 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
HNRNPU-228ENST00000640306 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
HNRNPU-228ENST00000640306 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
HNRNPU-228ENST00000640306 ABCA10Q8WWZ4 1543 aa23.75■■□□□ 1.39
HNRNPU-228ENST00000640306 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
HNRNPU-228ENST00000640306 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
HNRNPU-228ENST00000640306 MRC2Q9UBG0 1479 aa23.69■■□□□ 1.38
HNRNPU-228ENST00000640306 BCANQ96GW7 911 aa23.67■■□□□ 1.38
HNRNPU-228ENST00000640306 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
HNRNPU-228ENST00000640306 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
HNRNPU-228ENST00000640306 PCF11O94913 1555 aaKnown RBP23.63■■□□□ 1.37
HNRNPU-228ENST00000640306 MAP3K1Q13233 1512 aa23.59■■□□□ 1.37
HNRNPU-228ENST00000640306 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
HNRNPU-228ENST00000640306 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.361e-7■■■■□ 22.9
HNRNPU-228ENST00000640306 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
HNRNPU-228ENST00000640306 MYT1Q01538 1121 aa23.54■■□□□ 1.36
HNRNPU-228ENST00000640306 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
HNRNPU-228ENST00000640306 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
HNRNPU-228ENST00000640306 WDR62O43379 1518 aa23.51■■□□□ 1.35
HNRNPU-228ENST00000640306 TSHZ2Q9NRE2 1034 aa23.5■■□□□ 1.35
HNRNPU-228ENST00000640306 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
HNRNPU-228ENST00000640306 FKBP8Q14318 412 aa23.5■■□□□ 1.35
HNRNPU-228ENST00000640306 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
HNRNPU-228ENST00000640306 CFAP43Q8NDM7 1665 aa23.47■■□□□ 1.35
HNRNPU-228ENST00000640306 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
HNRNPU-228ENST00000640306 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
HNRNPU-228ENST00000640306 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
HNRNPU-228ENST00000640306 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
HNRNPU-228ENST00000640306 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
HNRNPU-228ENST00000640306 CUL7Q14999 1698 aa23.42■■□□□ 1.34
HNRNPU-228ENST00000640306 ANP32CO43423 234 aa23.41■■□□□ 1.34
HNRNPU-228ENST00000640306 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
HNRNPU-228ENST00000640306 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.34
HNRNPU-228ENST00000640306 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
HNRNPU-228ENST00000640306 TIMELESSQ9UNS1 1208 aa23.36■■□□□ 1.33
HNRNPU-228ENST00000640306 CHIC2Q9UKJ5 165 aa23.35■■□□□ 1.33
HNRNPU-228ENST00000640306 CCDC18Q5T9S5 1454 aa23.35■■□□□ 1.33
HNRNPU-228ENST00000640306 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
HNRNPU-228ENST00000640306 FMN1Q68DA7 1419 aa23.33■■□□□ 1.32
HNRNPU-228ENST00000640306 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
HNRNPU-228ENST00000640306 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
HNRNPU-228ENST00000640306 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
HNRNPU-228ENST00000640306 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
HNRNPU-228ENST00000640306 NEFLP07196 543 aa23.29■■□□□ 1.32
HNRNPU-228ENST00000640306 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
HNRNPU-228ENST00000640306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.312e-10■■■□□ 16.6
HNRNPU-228ENST00000640306 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
HNRNPU-228ENST00000640306 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
HNRNPU-228ENST00000640306 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
HNRNPU-228ENST00000640306 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
HNRNPU-228ENST00000640306 FBLN2P98095 1184 aa23.23■■□□□ 1.31
HNRNPU-228ENST00000640306 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
HNRNPU-228ENST00000640306 HFM1A2PYH4 1435 aa23.23■■□□□ 1.31
HNRNPU-228ENST00000640306 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
HNRNPU-228ENST00000640306 NAIPQ13075 1403 aa23.22■■□□□ 1.31
HNRNPU-228ENST00000640306 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
HNRNPU-228ENST00000640306 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
HNRNPU-228ENST00000640306 FOXD1Q16676 465 aa23.17■■□□□ 1.3
HNRNPU-228ENST00000640306 IRX6P78412 446 aaPredicted RBP23.16■■□□□ 1.3
HNRNPU-228ENST00000640306 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
HNRNPU-228ENST00000640306 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
HNRNPU-228ENST00000640306 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
HNRNPU-228ENST00000640306 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
HNRNPU-228ENST00000640306 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.29
HNRNPU-228ENST00000640306 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
HNRNPU-228ENST00000640306 SAMD9Q5K651 1589 aa23.08■■□□□ 1.28
HNRNPU-228ENST00000640306 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
HNRNPU-228ENST00000640306 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
HNRNPU-228ENST00000640306 RBM19Q9Y4C8 960 aaKnown RBP23.05■■□□□ 1.28
HNRNPU-228ENST00000640306 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
HNRNPU-228ENST00000640306 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
HNRNPU-228ENST00000640306 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
HNRNPU-228ENST00000640306 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
HNRNPU-228ENST00000640306 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
HNRNPU-228ENST00000640306 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
HNRNPU-228ENST00000640306 L3MBTL2Q969R5 705 aa23.02■■□□□ 1.27
HNRNPU-228ENST00000640306 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.27
HNRNPU-228ENST00000640306 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
HNRNPU-228ENST00000640306 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
HNRNPU-228ENST00000640306 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.272e-12■■■■□ 22
HNRNPU-228ENST00000640306 SYNJ2O15056 1496 aa23■■□□□ 1.27
HNRNPU-228ENST00000640306 KDM6BO15054 1643 aa22.99■■□□□ 1.27
HNRNPU-228ENST00000640306 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms