RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 CUX2O14529 1486 aa17.28■□□□□ 0.36
HNRNPU-221ENST00000639824 IGF1RP08069 1367 aa17.22■□□□□ 0.35
HNRNPU-221ENST00000639824 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
HNRNPU-221ENST00000639824 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
HNRNPU-221ENST00000639824 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
HNRNPU-221ENST00000639824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
HNRNPU-221ENST00000639824 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-221ENST00000639824 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
HNRNPU-221ENST00000639824 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-221ENST00000639824 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
HNRNPU-221ENST00000639824 CUL7Q14999 1698 aa17.16■□□□□ 0.34
HNRNPU-221ENST00000639824 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-221ENST00000639824 NESP48681 1621 aa17.14■□□□□ 0.33
HNRNPU-221ENST00000639824 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
HNRNPU-221ENST00000639824 ARHGAP35Q9NRY4 1499 aa17.11■□□□□ 0.33
HNRNPU-221ENST00000639824 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-221ENST00000639824 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
HNRNPU-221ENST00000639824 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
HNRNPU-221ENST00000639824 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
HNRNPU-221ENST00000639824 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-221ENST00000639824 CAPN15O75808 1086 aa17.06■□□□□ 0.32
HNRNPU-221ENST00000639824 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
HNRNPU-221ENST00000639824 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
HNRNPU-221ENST00000639824 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
HNRNPU-221ENST00000639824 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
HNRNPU-221ENST00000639824 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
HNRNPU-221ENST00000639824 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.32
HNRNPU-221ENST00000639824 CTTNBP2Q8WZ74 1663 aa17.02■□□□□ 0.32
HNRNPU-221ENST00000639824 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
HNRNPU-221ENST00000639824 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.31
HNRNPU-221ENST00000639824 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
HNRNPU-221ENST00000639824 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
HNRNPU-221ENST00000639824 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
HNRNPU-221ENST00000639824 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
HNRNPU-221ENST00000639824 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.31e-11■■■■□ 26.6
HNRNPU-221ENST00000639824 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
HNRNPU-221ENST00000639824 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.3
HNRNPU-221ENST00000639824 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.3
HNRNPU-221ENST00000639824 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-221ENST00000639824 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-221ENST00000639824 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
HNRNPU-221ENST00000639824 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-221ENST00000639824 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
HNRNPU-221ENST00000639824 ZBTB22O15209 634 aa16.86■□□□□ 0.29
HNRNPU-221ENST00000639824 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-221ENST00000639824 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
HNRNPU-221ENST00000639824 CCNB3Q8WWL7 1395 aa16.86■□□□□ 0.29
HNRNPU-221ENST00000639824 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
HNRNPU-221ENST00000639824 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
HNRNPU-221ENST00000639824 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-221ENST00000639824 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
HNRNPU-221ENST00000639824 DSG3P32926 999 aa16.83■□□□□ 0.28
HNRNPU-221ENST00000639824 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-221ENST00000639824 FHOD3Q2V2M9 1422 aa16.79■□□□□ 0.28
HNRNPU-221ENST00000639824 WDR62O43379 1518 aa16.79■□□□□ 0.28
HNRNPU-221ENST00000639824 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
HNRNPU-221ENST00000639824 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
HNRNPU-221ENST00000639824 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
HNRNPU-221ENST00000639824 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
HNRNPU-221ENST00000639824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
HNRNPU-221ENST00000639824 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-221ENST00000639824 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
HNRNPU-221ENST00000639824 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
HNRNPU-221ENST00000639824 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-221ENST00000639824 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
HNRNPU-221ENST00000639824 ABCB7O75027 752 aa16.67■□□□□ 0.26
HNRNPU-221ENST00000639824 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
HNRNPU-221ENST00000639824 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-221ENST00000639824 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
HNRNPU-221ENST00000639824 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
HNRNPU-221ENST00000639824 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
HNRNPU-221ENST00000639824 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
HNRNPU-221ENST00000639824 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
HNRNPU-221ENST00000639824 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-221ENST00000639824 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
HNRNPU-221ENST00000639824 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
HNRNPU-221ENST00000639824 LRRIQ1Q96JM4 1722 aa16.6■□□□□ 0.25
HNRNPU-221ENST00000639824 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-221ENST00000639824 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
HNRNPU-221ENST00000639824 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.25
HNRNPU-221ENST00000639824 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.25
HNRNPU-221ENST00000639824 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
HNRNPU-221ENST00000639824 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
HNRNPU-221ENST00000639824 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
HNRNPU-221ENST00000639824 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
HNRNPU-221ENST00000639824 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
HNRNPU-221ENST00000639824 ITGAEP38570 1179 aa16.54■□□□□ 0.24
HNRNPU-221ENST00000639824 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
HNRNPU-221ENST00000639824 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
HNRNPU-221ENST00000639824 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
HNRNPU-221ENST00000639824 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
HNRNPU-221ENST00000639824 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
HNRNPU-221ENST00000639824 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
HNRNPU-221ENST00000639824 POLA2Q14181 598 aa16.49■□□□□ 0.23
HNRNPU-221ENST00000639824 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
HNRNPU-221ENST00000639824 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
HNRNPU-221ENST00000639824 PTPN23Q9H3S7 1636 aa16.47■□□□□ 0.23
HNRNPU-221ENST00000639824 TIMELESSQ9UNS1 1208 aa16.47■□□□□ 0.23
HNRNPU-221ENST00000639824 TCOF1Q13428 1488 aaKnown RBP16.45■□□□□ 0.22
HNRNPU-221ENST00000639824 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms