RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 HRCP23327 699 aa18.92■□□□□ 0.62
PAX6-258ENST00000639548 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
PAX6-258ENST00000639548 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
PAX6-258ENST00000639548 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
PAX6-258ENST00000639548 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
PAX6-258ENST00000639548 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
PAX6-258ENST00000639548 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
PAX6-258ENST00000639548 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
PAX6-258ENST00000639548 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.61
PAX6-258ENST00000639548 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
PAX6-258ENST00000639548 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.6
PAX6-258ENST00000639548 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
PAX6-258ENST00000639548 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
PAX6-258ENST00000639548 EFCAB5A4FU69 1503 aa18.81■□□□□ 0.6
PAX6-258ENST00000639548 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
PAX6-258ENST00000639548 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
PAX6-258ENST00000639548 APLP2Q06481 763 aa18.73■□□□□ 0.59
PAX6-258ENST00000639548 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
PAX6-258ENST00000639548 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
PAX6-258ENST00000639548 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
PAX6-258ENST00000639548 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
PAX6-258ENST00000639548 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
PAX6-258ENST00000639548 CFAP43Q8NDM7 1665 aa18.62■□□□□ 0.57
PAX6-258ENST00000639548 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
PAX6-258ENST00000639548 TIAM1Q13009 1591 aa18.61■□□□□ 0.57
PAX6-258ENST00000639548 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
PAX6-258ENST00000639548 NUP160Q12769 1436 aa18.6■□□□□ 0.57
PAX6-258ENST00000639548 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
PAX6-258ENST00000639548 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.56
PAX6-258ENST00000639548 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
PAX6-258ENST00000639548 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
PAX6-258ENST00000639548 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
PAX6-258ENST00000639548 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
PAX6-258ENST00000639548 FHOD3Q2V2M9 1422 aa18.52■□□□□ 0.56
PAX6-258ENST00000639548 RRBP1Q9P2E9 1410 aaKnown RBP18.52■□□□□ 0.56
PAX6-258ENST00000639548 UGGT2Q9NYU1 1516 aa18.51■□□□□ 0.55
PAX6-258ENST00000639548 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
PAX6-258ENST00000639548 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
PAX6-258ENST00000639548 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
PAX6-258ENST00000639548 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
PAX6-258ENST00000639548 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
PAX6-258ENST00000639548 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
PAX6-258ENST00000639548 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
PAX6-258ENST00000639548 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
PAX6-258ENST00000639548 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
PAX6-258ENST00000639548 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
PAX6-258ENST00000639548 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
PAX6-258ENST00000639548 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
PAX6-258ENST00000639548 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
PAX6-258ENST00000639548 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
PAX6-258ENST00000639548 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
PAX6-258ENST00000639548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
PAX6-258ENST00000639548 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
PAX6-258ENST00000639548 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
PAX6-258ENST00000639548 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
PAX6-258ENST00000639548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
PAX6-258ENST00000639548 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
PAX6-258ENST00000639548 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
PAX6-258ENST00000639548 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
PAX6-258ENST00000639548 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
PAX6-258ENST00000639548 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
PAX6-258ENST00000639548 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
PAX6-258ENST00000639548 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
PAX6-258ENST00000639548 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
PAX6-258ENST00000639548 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
PAX6-258ENST00000639548 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
PAX6-258ENST00000639548 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
PAX6-258ENST00000639548 KIF13AQ9H1H9 1805 aa18.18■□□□□ 0.5
PAX6-258ENST00000639548 MAGI3Q5TCQ9 1506 aa18.18■□□□□ 0.5
PAX6-258ENST00000639548 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
PAX6-258ENST00000639548 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
PAX6-258ENST00000639548 MAPKBP1O60336 1514 aa18.16■□□□□ 0.5
PAX6-258ENST00000639548 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
PAX6-258ENST00000639548 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
PAX6-258ENST00000639548 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
PAX6-258ENST00000639548 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
PAX6-258ENST00000639548 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
PAX6-258ENST00000639548 ABCA8O94911 1581 aa18.1■□□□□ 0.49
PAX6-258ENST00000639548 PTPRGP23470 1445 aa18.1■□□□□ 0.49
PAX6-258ENST00000639548 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
PAX6-258ENST00000639548 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
PAX6-258ENST00000639548 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
PAX6-258ENST00000639548 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
PAX6-258ENST00000639548 FAM69CQ0P6D2 419 aa18.08■□□□□ 0.49
PAX6-258ENST00000639548 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
PAX6-258ENST00000639548 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
PAX6-258ENST00000639548 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
PAX6-258ENST00000639548 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
PAX6-258ENST00000639548 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
PAX6-258ENST00000639548 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.48
PAX6-258ENST00000639548 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
PAX6-258ENST00000639548 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
PAX6-258ENST00000639548 AKNAQ7Z591 1439 aa18■□□□□ 0.47
PAX6-258ENST00000639548 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
PAX6-258ENST00000639548 HFM1A2PYH4 1435 aa18■□□□□ 0.47
PAX6-258ENST00000639548 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
PAX6-258ENST00000639548 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
PAX6-258ENST00000639548 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
PAX6-258ENST00000639548 ITGAEP38570 1179 aa17.94■□□□□ 0.46
PAX6-258ENST00000639548 PTPRKQ15262 1439 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms