RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
CROCCP2-204ENST00000639456 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
CROCCP2-204ENST00000639456 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
CROCCP2-204ENST00000639456 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
CROCCP2-204ENST00000639456 MAPKBP1O60336 1514 aa25.85■■□□□ 1.73
CROCCP2-204ENST00000639456 FHOD3Q2V2M9 1422 aa25.83■■□□□ 1.73
CROCCP2-204ENST00000639456 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
CROCCP2-204ENST00000639456 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
CROCCP2-204ENST00000639456 PCF11O94913 1555 aaKnown RBP25.79■■□□□ 1.72
CROCCP2-204ENST00000639456 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
CROCCP2-204ENST00000639456 NESP48681 1621 aa25.77■■□□□ 1.72
CROCCP2-204ENST00000639456 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
CROCCP2-204ENST00000639456 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
CROCCP2-204ENST00000639456 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
CROCCP2-204ENST00000639456 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
CROCCP2-204ENST00000639456 SUPT16HQ9Y5B9 1047 aaKnown RBP25.69■■□□□ 1.7
CROCCP2-204ENST00000639456 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
CROCCP2-204ENST00000639456 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
CROCCP2-204ENST00000639456 CFAP43Q8NDM7 1665 aa25.64■■□□□ 1.69
CROCCP2-204ENST00000639456 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
CROCCP2-204ENST00000639456 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
CROCCP2-204ENST00000639456 TDRD9Q8NDG6 1382 aaKnown RBP25.58■■□□□ 1.69
CROCCP2-204ENST00000639456 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
CROCCP2-204ENST00000639456 CASKIN1Q8WXD9 1431 aa25.55■■□□□ 1.68
CROCCP2-204ENST00000639456 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
CROCCP2-204ENST00000639456 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
CROCCP2-204ENST00000639456 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
CROCCP2-204ENST00000639456 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
CROCCP2-204ENST00000639456 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
CROCCP2-204ENST00000639456 CTTNBP2Q8WZ74 1663 aa25.47■■□□□ 1.67
CROCCP2-204ENST00000639456 BCANQ96GW7 911 aa25.47■■□□□ 1.67
CROCCP2-204ENST00000639456 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
CROCCP2-204ENST00000639456 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
CROCCP2-204ENST00000639456 FMN1Q68DA7 1419 aa25.44■■□□□ 1.66
CROCCP2-204ENST00000639456 CUL7Q14999 1698 aa25.44■■□□□ 1.66
CROCCP2-204ENST00000639456 SNAPC4Q5SXM2 1469 aa25.42■■□□□ 1.66
CROCCP2-204ENST00000639456 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.664e-8■■■■■ 29.6
CROCCP2-204ENST00000639456 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
CROCCP2-204ENST00000639456 TRIM52Q96A61 297 aa25.39■■□□□ 1.65
CROCCP2-204ENST00000639456 CCDC18Q5T9S5 1454 aa25.39■■□□□ 1.65
CROCCP2-204ENST00000639456 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
CROCCP2-204ENST00000639456 CHIC2Q9UKJ5 165 aa25.38■■□□□ 1.65
CROCCP2-204ENST00000639456 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
CROCCP2-204ENST00000639456 TIMELESSQ9UNS1 1208 aa25.35■■□□□ 1.65
CROCCP2-204ENST00000639456 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
CROCCP2-204ENST00000639456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.34■■□□□ 1.654e-9■■□□□ 12.9
CROCCP2-204ENST00000639456 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
CROCCP2-204ENST00000639456 RRP7BPQ9NSQ0 103 aa25.34■■□□□ 1.65
CROCCP2-204ENST00000639456 NCOA2Q15596 1464 aa25.33■■□□□ 1.65
CROCCP2-204ENST00000639456 FKBP8Q14318 412 aa25.31■■□□□ 1.64
CROCCP2-204ENST00000639456 ANP32CO43423 234 aa25.3■■□□□ 1.64
CROCCP2-204ENST00000639456 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
CROCCP2-204ENST00000639456 TSHZ2Q9NRE2 1034 aa25.28■■□□□ 1.64
CROCCP2-204ENST00000639456 NAIPQ13075 1403 aa25.27■■□□□ 1.64
CROCCP2-204ENST00000639456 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
CROCCP2-204ENST00000639456 PTPN23Q9H3S7 1636 aa25.27■■□□□ 1.64
CROCCP2-204ENST00000639456 UACAQ9BZF9 1416 aa25.26■■□□□ 1.63
CROCCP2-204ENST00000639456 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
CROCCP2-204ENST00000639456 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
CROCCP2-204ENST00000639456 SAMD9Q5K651 1589 aa25.25■■□□□ 1.63
CROCCP2-204ENST00000639456 MAGI3Q5TCQ9 1506 aa25.22■■□□□ 1.63
CROCCP2-204ENST00000639456 SUPT6HQ7KZ85 1726 aaKnown RBP25.18■■□□□ 1.62
CROCCP2-204ENST00000639456 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
CROCCP2-204ENST00000639456 FOXD1Q16676 465 aa25.16■■□□□ 1.62
CROCCP2-204ENST00000639456 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
CROCCP2-204ENST00000639456 CCER2I3L3R5 266 aa25.14■■□□□ 1.62
CROCCP2-204ENST00000639456 EHBP1L1Q8N3D4 1523 aa25.12■■□□□ 1.61
CROCCP2-204ENST00000639456 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
CROCCP2-204ENST00000639456 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
CROCCP2-204ENST00000639456 MYT1Q01538 1121 aa25.08■■□□□ 1.61
CROCCP2-204ENST00000639456 KDM6BO15054 1643 aa25.07■■□□□ 1.6
CROCCP2-204ENST00000639456 KDM5BQ9UGL1 1544 aa25.07■■□□□ 1.6
CROCCP2-204ENST00000639456 HSPA5P11021 654 aaKnown RBP25.06■■□□□ 1.6
CROCCP2-204ENST00000639456 NEFLP07196 543 aa25.06■■□□□ 1.6
CROCCP2-204ENST00000639456 TARBP1Q13395 1621 aaKnown RBP25.05■■□□□ 1.6
CROCCP2-204ENST00000639456 DENND4BO75064 1496 aaPredicted RBP25.05■■□□□ 1.6
CROCCP2-204ENST00000639456 WASHC2AQ641Q2 1341 aa25.03■■□□□ 1.6
CROCCP2-204ENST00000639456 THOC2Q8NI27 1593 aaKnown RBP25.03■■□□□ 1.6
CROCCP2-204ENST00000639456 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
CROCCP2-204ENST00000639456 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
CROCCP2-204ENST00000639456 MPHOSPH9Q99550 1183 aa25.01■■□□□ 1.6
CROCCP2-204ENST00000639456 HNRNPUQ00839 825 aaKnown RBP eCLIP25.01■■□□□ 1.59
CROCCP2-204ENST00000639456 L3MBTL2Q969R5 705 aa24.99■■□□□ 1.59
CROCCP2-204ENST00000639456 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
CROCCP2-204ENST00000639456 IQGAP2Q13576 1575 aa24.98■■□□□ 1.59
CROCCP2-204ENST00000639456 IRX6P78412 446 aaPredicted RBP24.97■■□□□ 1.59
CROCCP2-204ENST00000639456 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
CROCCP2-204ENST00000639456 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
CROCCP2-204ENST00000639456 TCOF1Q13428 1488 aaKnown RBP24.94■■□□□ 1.58
CROCCP2-204ENST00000639456 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
CROCCP2-204ENST00000639456 CCDC184Q52MB2 194 aa24.94■■□□□ 1.58
CROCCP2-204ENST00000639456 EIF4G2P78344 907 aaKnown RBP eCLIP24.93■■□□□ 1.58
CROCCP2-204ENST00000639456 GCC2Q8IWJ2 1684 aa24.9■■□□□ 1.58
CROCCP2-204ENST00000639456 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
CROCCP2-204ENST00000639456 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
CROCCP2-204ENST00000639456 WDR62O43379 1518 aa24.87■■□□□ 1.57
CROCCP2-204ENST00000639456 CNGB1Q14028 1251 aaPredicted RBP24.86■■□□□ 1.57
CROCCP2-204ENST00000639456 NBPF8Q3BBV2 869 aa24.86■■□□□ 1.57
CROCCP2-204ENST00000639456 MIA2Q96PC5 1412 aa24.84■■□□□ 1.57
CROCCP2-204ENST00000639456 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms